Click here to switch to the map view.

The map label for this gene is 21242059

Identifier: 21242059

GI number: 21242059

Start: 1503221

End: 1505149

Strand: Direct

Name: 21242059

Synonym: XAC1306

Alternate gene names: NA

Gene position: 1503221-1505149 (Clockwise)

Preceding gene: 21242058

Following gene: 21242060

Centisome position: 29.04

GC content: 66.61

Gene sequence:

>1929_bases
ATGATCGATCGTCGTACCTTTCTTGCCACAGGTGTGGTGGCCGCTGCCGCCAGCTTCGGCGCGTCGGCAGCGCGCATTGC
GCAGACGCCGCGTGCCAACGGTCCGGCGCCGTGGGGTGCGGTGCCCAGCCCGCGCCAGCTGCGCTGGCATCGGTGGGAGC
AATACGCCTTCGTGCATTTTGCGATGAATACCTTCACCGACAAGGAATGGGGCTACGGCGACGAGGATCCGCGCAAATTC
GATCCCAGCGATTTTTCAGCCGACCAGATCGTCGCTGCTGCGAAGGCCGGCAATCTGAAAGGGCTGATTTTCACTGCCAA
GCATCACGATGGATTCTGCCTTTGGCCGACACGCCTGACCGAGCACTGCATCCGCAATTCGCCCTACAAAAACGGCAAGG
GTGACATCGTCGGCGAGATGGCCGCGGCGTGTCGACGCGCCGGCCTGGCCTTCGGCATCTATCTCTCCCCCTGGGATCGC
AACCACGCCGAGTACGGTCGCCCCGGCTATCTGGACTATTTCCGCAAACAGATCGTCGAACTCTGCACAGGTTACGGCGA
CCTGTTCGAGTTCTGGTTCGACGGCGCCAATGGCGGCGATGGCTATTACGGTGGGGCGCGCGAATCGCGCAAGATCGATG
CGCCTGCGTACTACAACTGGCCGCGGATGATCGAGCTGGTGCATCAGCATCAGCCAATGGCATGTACCTTCGATCCGCTC
GGTGCCGATATCCGGTGGGGCGGCAACGAAGATGGCATCGCCGGCGATCCATCCTGGCCGACGATGCCCAATGGGCCGTA
CACCCAGGAAAACGGCAATTCCGGCGTGCGCGGAGGAGCGCTGTGGTGGCCGGCCGAAACCAACACCTCGATCCGTCCGG
GCTGGTTCTATCACGCCGACGAAGACGGCAAGGTGCGGAGCCCGGAGAATCTGGTGCGCTATTTCGACACCTCGGTGGCG
CGCGGTACCAACATGAACCTCAATCTGCCGCCCGACCGACGCGGCCGCATCCCCGACCACGACGTGGCGGTGCTGCAGAG
TTTCGGCGACGCGATCCGCGCCAGCTTCGCCATCGACCTGGCCAAGGGCGCCAAGGCCAGTGCCAGCGCCTCGCGCGGTG
CCGGGTTCGAGCCGGCGCGCGTGCTCGATCGCCAGCCGGACAGCTACTGGTCCACGCCGGACGAGGTCACCACGCCAACG
CTGACGCTGGAACTGTCGACGGTGCACAGCTTCGACCTGATCCGGTTGCGGGAGTATCTGCCGCTGGGCGTGCGCGTTAC
CCGCTTCGCGGTCGAAGCCGAGGTCGATGGGCAATGGCGGCGGCTGGCCGAGGCGCAGTGCATCGGTGCACAGCGGATCG
TGCGCCTGGAGCGCCCGATCGCCGCACGCCGGGTGCGCCTGGTCGTGCTCGAGGCGCCGGTCTGCCCGGCGATCAGCGAA
TTCGCGCTGTTCCGCGCCGTTGCGCCGGTGCCGGTCGCGCGGCCGACGGCGAATGCACCGGACGTGCTGTCCACCGCCGG
CTGGCGCATCGTCGAGGCGAGCGCGCCAGGGGCGGAGACCTTGCTCGACGACGATGCCAGCACGATCTGGATCACGCCCG
CACCGACGCCGGGCCATCCCGTGCAGGCGACGATCGACCTCGGCGCGTCGCGTCAGGTTGCTGGGTTCAGTCTCACGCCC
TCGCGCGCAGTGATGACCGGTGCGGCGCCGCCGAAGGGCTATCGCGCCGAAACCAGCGAAGATGGCCAACACTGGCAGCC
GGCCGGCGCCGGCGAGCTCTCCAACATCGCCTATGCGCTCTCGACCCAGCGGCTGAATTTCCCAGAAGTCCGCCAGATCC
GCTATCTGCGGCTGTCGTTCGCGGAAACTGCCGTGCCCGCCGAGCGGCTGGCGATCGCAGGGATCGGTGCGTTCTCGCGC
TTGCGATGA

Upstream 100 bases:

>100_bases
CCGCACGCGGTCCTTTGCACAACCGCTTTTGGCTTGGTGGGAGGACGCTTCGCCGTTGGAAAAGCTAAGATCGAAACTTG
TGCAAAGTCGGAAGTCGCCA

Downstream 100 bases:

>100_bases
GCGCGTGCGCTCCCGCGCGGCCATGCGCCGCGTGGGAGGGGATCGCTAGGTGGAGACAGTTCCGCGCGTTGAATGACATC
AGGCGAAGCGATGAAGCGGG

Product: hypothetical protein

Products: L-fucose; alcohol

Alternate protein names: Glycoside Hydrolase Family; Coagulation Factor 5/8 Type Domain Protein; Alpha-1 3/4-Fucosidase; Calx-Beta Domain-Containing Protein; Exported Alpha-L-Fucosidase Protein; Alpha-L-Fucosidase Protein; Lipoprotein; Exported Fucosidase; Coagulation Factor 5/8 Type Domain-Containing Protein; Alpha-L-Fucosidase-Like Protein; Glycosyl Hydrolase; Ig Domain-Containing; Twin-Arginine Translocation Pathway Signal; Fucosidase; Tat Pathway Signal Sequence Domain Protein; Alpha-L-Fucosidase Family Protein; F5/8 Type C Domain-Containing Protein; DS Domain-Containing Protein; Glycoside Hydrolase Family Alpha-L-Fucosidase

Number of amino acids: Translated: 642; Mature: 642

Protein sequence:

>642_residues
MIDRRTFLATGVVAAAASFGASAARIAQTPRANGPAPWGAVPSPRQLRWHRWEQYAFVHFAMNTFTDKEWGYGDEDPRKF
DPSDFSADQIVAAAKAGNLKGLIFTAKHHDGFCLWPTRLTEHCIRNSPYKNGKGDIVGEMAAACRRAGLAFGIYLSPWDR
NHAEYGRPGYLDYFRKQIVELCTGYGDLFEFWFDGANGGDGYYGGARESRKIDAPAYYNWPRMIELVHQHQPMACTFDPL
GADIRWGGNEDGIAGDPSWPTMPNGPYTQENGNSGVRGGALWWPAETNTSIRPGWFYHADEDGKVRSPENLVRYFDTSVA
RGTNMNLNLPPDRRGRIPDHDVAVLQSFGDAIRASFAIDLAKGAKASASASRGAGFEPARVLDRQPDSYWSTPDEVTTPT
LTLELSTVHSFDLIRLREYLPLGVRVTRFAVEAEVDGQWRRLAEAQCIGAQRIVRLERPIAARRVRLVVLEAPVCPAISE
FALFRAVAPVPVARPTANAPDVLSTAGWRIVEASAPGAETLLDDDASTIWITPAPTPGHPVQATIDLGASRQVAGFSLTP
SRAVMTGAAPPKGYRAETSEDGQHWQPAGAGELSNIAYALSTQRLNFPEVRQIRYLRLSFAETAVPAERLAIAGIGAFSR
LR

Sequences:

>Translated_642_residues
MIDRRTFLATGVVAAAASFGASAARIAQTPRANGPAPWGAVPSPRQLRWHRWEQYAFVHFAMNTFTDKEWGYGDEDPRKF
DPSDFSADQIVAAAKAGNLKGLIFTAKHHDGFCLWPTRLTEHCIRNSPYKNGKGDIVGEMAAACRRAGLAFGIYLSPWDR
NHAEYGRPGYLDYFRKQIVELCTGYGDLFEFWFDGANGGDGYYGGARESRKIDAPAYYNWPRMIELVHQHQPMACTFDPL
GADIRWGGNEDGIAGDPSWPTMPNGPYTQENGNSGVRGGALWWPAETNTSIRPGWFYHADEDGKVRSPENLVRYFDTSVA
RGTNMNLNLPPDRRGRIPDHDVAVLQSFGDAIRASFAIDLAKGAKASASASRGAGFEPARVLDRQPDSYWSTPDEVTTPT
LTLELSTVHSFDLIRLREYLPLGVRVTRFAVEAEVDGQWRRLAEAQCIGAQRIVRLERPIAARRVRLVVLEAPVCPAISE
FALFRAVAPVPVARPTANAPDVLSTAGWRIVEASAPGAETLLDDDASTIWITPAPTPGHPVQATIDLGASRQVAGFSLTP
SRAVMTGAAPPKGYRAETSEDGQHWQPAGAGELSNIAYALSTQRLNFPEVRQIRYLRLSFAETAVPAERLAIAGIGAFSR
LR
>Mature_642_residues
MIDRRTFLATGVVAAAASFGASAARIAQTPRANGPAPWGAVPSPRQLRWHRWEQYAFVHFAMNTFTDKEWGYGDEDPRKF
DPSDFSADQIVAAAKAGNLKGLIFTAKHHDGFCLWPTRLTEHCIRNSPYKNGKGDIVGEMAAACRRAGLAFGIYLSPWDR
NHAEYGRPGYLDYFRKQIVELCTGYGDLFEFWFDGANGGDGYYGGARESRKIDAPAYYNWPRMIELVHQHQPMACTFDPL
GADIRWGGNEDGIAGDPSWPTMPNGPYTQENGNSGVRGGALWWPAETNTSIRPGWFYHADEDGKVRSPENLVRYFDTSVA
RGTNMNLNLPPDRRGRIPDHDVAVLQSFGDAIRASFAIDLAKGAKASASASRGAGFEPARVLDRQPDSYWSTPDEVTTPT
LTLELSTVHSFDLIRLREYLPLGVRVTRFAVEAEVDGQWRRLAEAQCIGAQRIVRLERPIAARRVRLVVLEAPVCPAISE
FALFRAVAPVPVARPTANAPDVLSTAGWRIVEASAPGAETLLDDDASTIWITPAPTPGHPVQATIDLGASRQVAGFSLTP
SRAVMTGAAPPKGYRAETSEDGQHWQPAGAGELSNIAYALSTQRLNFPEVRQIRYLRLSFAETAVPAERLAIAGIGAFSR
LR

Specific function: Unknown

COG id: COG3669

COG function: function code G; Alpha-L-fucosidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 3.2.1.51

Molecular weight: Translated: 70428; Mature: 70428

Theoretical pI: Translated: 7.16; Mature: 7.16

Prosite motif: PS50022 FA58C_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDRRTFLATGVVAAAASFGASAARIAQTPRANGPAPWGAVPSPRQLRWHRWEQYAFVHF
CCCCHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHEEEEEE
AMNTFTDKEWGYGDEDPRKFDPSDFSADQIVAAAKAGNLKGLIFTAKHHDGFCLWPTRLT
EEHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCEEEEEEEECCCCEEECHHHHH
EHCIRNSPYKNGKGDIVGEMAAACRRAGLAFGIYLSPWDRNHAEYGRPGYLDYFRKQIVE
HHHHCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHH
LCTGYGDLFEFWFDGANGGDGYYGGARESRKIDAPAYYNWPRMIELVHQHQPMACTFDPL
HHHCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEECCHHHHHHHHHCCCCEEEECCC
GADIRWGGNEDGIAGDPSWPTMPNGPYTQENGNSGVRGGALWWPAETNTSIRPGWFYHAD
CCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCEEEECC
EDGKVRSPENLVRYFDTSVARGTNMNLNLPPDRRGRIPDHDVAVLQSFGDAIRASFAIDL
CCCCCCCHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHEEEH
AKGAKASASASRGAGFEPARVLDRQPDSYWSTPDEVTTPTLTLELSTVHSFDLIRLREYL
HCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHC
PLGVRVTRFAVEAEVDGQWRRLAEAQCIGAQRIVRLERPIAARRVRLVVLEAPVCPAISE
CCCEEEEEEEEEECCCHHHHHHHHHHHHCHHHHHHHHCCHHHCEEEEEEEECCCCCHHHH
FALFRAVAPVPVARPTANAPDVLSTAGWRIVEASAPGAETLLDDDASTIWITPAPTPGHP
HHHHHHHCCCCCCCCCCCCCCHHHCCCCEEEECCCCCCHHHCCCCCCEEEEECCCCCCCC
VQATIDLGASRQVAGFSLTPSRAVMTGAAPPKGYRAETSEDGQHWQPAGAGELSNIAYAL
EEEEEECCCCCEECCEECCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHEEEEE
STQRLNFPEVRQIRYLRLSFAETAVPAERLAIAGIGAFSRLR
ECCCCCCHHHHHHHHHHHHHHHHCCCHHHHEEECCCHHHHCC
>Mature Secondary Structure
MIDRRTFLATGVVAAAASFGASAARIAQTPRANGPAPWGAVPSPRQLRWHRWEQYAFVHF
CCCCHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHEEEEEE
AMNTFTDKEWGYGDEDPRKFDPSDFSADQIVAAAKAGNLKGLIFTAKHHDGFCLWPTRLT
EEHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCEEEEEEEECCCCEEECHHHHH
EHCIRNSPYKNGKGDIVGEMAAACRRAGLAFGIYLSPWDRNHAEYGRPGYLDYFRKQIVE
HHHHCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHH
LCTGYGDLFEFWFDGANGGDGYYGGARESRKIDAPAYYNWPRMIELVHQHQPMACTFDPL
HHHCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEECCHHHHHHHHHCCCCEEEECCC
GADIRWGGNEDGIAGDPSWPTMPNGPYTQENGNSGVRGGALWWPAETNTSIRPGWFYHAD
CCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCEEEECC
EDGKVRSPENLVRYFDTSVARGTNMNLNLPPDRRGRIPDHDVAVLQSFGDAIRASFAIDL
CCCCCCCHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHEEEH
AKGAKASASASRGAGFEPARVLDRQPDSYWSTPDEVTTPTLTLELSTVHSFDLIRLREYL
HCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHC
PLGVRVTRFAVEAEVDGQWRRLAEAQCIGAQRIVRLERPIAARRVRLVVLEAPVCPAISE
CCCEEEEEEEEEECCCHHHHHHHHHHHHCHHHHHHHHCCHHHCEEEEEEEECCCCCHHHH
FALFRAVAPVPVARPTANAPDVLSTAGWRIVEASAPGAETLLDDDASTIWITPAPTPGHP
HHHHHHHCCCCCCCCCCCCCCHHHCCCCEEEECCCCCCHHHCCCCCCEEEEECCCCCCCC
VQATIDLGASRQVAGFSLTPSRAVMTGAAPPKGYRAETSEDGQHWQPAGAGELSNIAYAL
EEEEEECCCCCEECCEECCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHEEEEE
STQRLNFPEVRQIRYLRLSFAETAVPAERLAIAGIGAFSRLR
ECCCCCCHHHHHHHHHHHHHHHHCCCHHHHEEECCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: H2O; alpha-L-fucoside

Specific reaction: H2O + an alpha-L-fucoside = L-fucose + an alcohol

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA