Definition Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome.
Accession NC_003919
Length 5,175,554

Click here to switch to the map view.

The map label for this gene is yxkO [H]

Identifier: 21241929

GI number: 21241929

Start: 1336591

End: 1337460

Strand: Direct

Name: yxkO [H]

Synonym: XAC1175

Alternate gene names: 21241929

Gene position: 1336591-1337460 (Clockwise)

Preceding gene: 21241928

Following gene: 77748565

Centisome position: 25.83

GC content: 69.2

Gene sequence:

>870_bases
ATGGCTGCCGCACGCCTTCGCACGCTGACCGCTGCCGCACTGCGTGCGATGCCGCTGCCATCGCCCGGCGGCGACAAGGA
GCAGCGGGGGCGCGTGTTGGTGGTGGGGGGCTCGATGCGCGTGCCCGGTGCGGCATTGCTGGCCGGGGAAGCTGCATTGC
GCGCGGGCGCCGGCAAATTGCAGATCGCCACCGCTGCCAGCGTGGCGCCGGCAATGGCCCTGGCGGTGCCCGAGGCATTG
GTGCTGGGGCTGGGGCAGAACGGGCAGGGCGAGATTACGCGCGGGCACCGTGCATTGGACGCGGCGCTGGCAGCCTGCGA
CGCGGCCGTGATCGGGCCTGGCATGGCGTCGACCACGACGGCAACGGCGCTGGTCAAGCTGGCCGCTGCAAAGGCGGTCT
GTCCCTTGGTGCTGGACGCCGGTGCGTTGTCGCGCAGCTTGCGTGCGCCGCCTGGGCGGCCCTTCGTGCTGACGCCGCAT
GCGGGGGAGATGGCGACCCTCGCTGGCGACGACAAGGCTGCAGTGGAAGCAGCGCCGGGCGAGTACGCGCTGGCCTTCGC
GCAGAAGATGCGCAGCGTGGTGATCGTCAAGGGGGCGGACAGTTTCATCGCCGGGCCTGACGGTGCGCTATGGGTGCATC
GCGGTGGTGTGCCTGGGCTGGGCACGTCGGGCTCGGGCGATACCTTGGCCGGATTGATCGCAGGTTTCGCTGCGCGGGGC
AGCGATGCGTTGACCGCCGCGCTGTGGGGTGTATTTGTGCACGCGGTAGCGGGTAAACAGCTGTCCAGGCGGATTGGCAC
GGTTGGATTTCTGGCACGCGAGATTCCACAAGAAGTGCCCGGGATTTTGGATCGTTTGTCGCGCAAGTGA

Upstream 100 bases:

>100_bases
ATGGGCAATCGCTGCAACTGGTGCGCACCAAGTTCGTGCCGCCAGAGCTGGCCGATGAGCCGGTGACCACCGAATCCGAT
CGCCCGGCTGGAGCGCGCTG

Downstream 100 bases:

>100_bases
GTGAGCCCCTCCCTGCGGGAGAGGGGTTGGGGTGAGGGTACGGCTGCTGGGATTGGTGAAGAGTGAAGTCTTTTACGTTG
TTTTGTTCGCGATGCATTAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 289; Mature: 288

Protein sequence:

>289_residues
MAAARLRTLTAAALRAMPLPSPGGDKEQRGRVLVVGGSMRVPGAALLAGEAALRAGAGKLQIATAASVAPAMALAVPEAL
VLGLGQNGQGEITRGHRALDAALAACDAAVIGPGMASTTTATALVKLAAAKAVCPLVLDAGALSRSLRAPPGRPFVLTPH
AGEMATLAGDDKAAVEAAPGEYALAFAQKMRSVVIVKGADSFIAGPDGALWVHRGGVPGLGTSGSGDTLAGLIAGFAARG
SDALTAALWGVFVHAVAGKQLSRRIGTVGFLAREIPQEVPGILDRLSRK

Sequences:

>Translated_289_residues
MAAARLRTLTAAALRAMPLPSPGGDKEQRGRVLVVGGSMRVPGAALLAGEAALRAGAGKLQIATAASVAPAMALAVPEAL
VLGLGQNGQGEITRGHRALDAALAACDAAVIGPGMASTTTATALVKLAAAKAVCPLVLDAGALSRSLRAPPGRPFVLTPH
AGEMATLAGDDKAAVEAAPGEYALAFAQKMRSVVIVKGADSFIAGPDGALWVHRGGVPGLGTSGSGDTLAGLIAGFAARG
SDALTAALWGVFVHAVAGKQLSRRIGTVGFLAREIPQEVPGILDRLSRK
>Mature_288_residues
AAARLRTLTAAALRAMPLPSPGGDKEQRGRVLVVGGSMRVPGAALLAGEAALRAGAGKLQIATAASVAPAMALAVPEALV
LGLGQNGQGEITRGHRALDAALAACDAAVIGPGMASTTTATALVKLAAAKAVCPLVLDAGALSRSLRAPPGRPFVLTPHA
GEMATLAGDDKAAVEAAPGEYALAFAQKMRSVVIVKGADSFIAGPDGALWVHRGGVPGLGTSGSGDTLAGLIAGFAARGS
DALTAALWGVFVHAVAGKQLSRRIGTVGFLAREIPQEVPGILDRLSRK

Specific function: Unknown

COG id: COG0063

COG function: function code G; Predicted sugar kinase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 YjeF C-terminal domain [H]

Homologues:

Organism=Escherichia coli, GI1790609, Length=284, Percent_Identity=30.9859154929577, Blast_Score=97, Evalue=1e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017953
- InterPro:   IPR000631 [H]

Pfam domain/function: PF01256 Carb_kinase [H]

EC number: NA

Molecular weight: Translated: 28746; Mature: 28615

Theoretical pI: Translated: 10.84; Mature: 10.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAARLRTLTAAALRAMPLPSPGGDKEQRGRVLVVGGSMRVPGAALLAGEAALRAGAGKL
CCCHHHHHHHHHHHHHCCCCCCCCCHHHCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCE
QIATAASVAPAMALAVPEALVLGLGQNGQGEITRGHRALDAALAACDAAVIGPGMASTTT
EEEHHHHHHHHHHHHHHHHHEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHH
ATALVKLAAAKAVCPLVLDAGALSRSLRAPPGRPFVLTPHAGEMATLAGDDKAAVEAAPG
HHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCEEECCCCCCEEEECCCCCCEEECCCC
EYALAFAQKMRSVVIVKGADSFIAGPDGALWVHRGGVPGLGTSGSGDTLAGLIAGFAARG
HHHHHHHHHHCEEEEEECCCCEEECCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHCC
SDALTAALWGVFVHAVAGKQLSRRIGTVGFLAREIPQEVPGILDRLSRK
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
AAARLRTLTAAALRAMPLPSPGGDKEQRGRVLVVGGSMRVPGAALLAGEAALRAGAGKL
CCHHHHHHHHHHHHHCCCCCCCCCHHHCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCE
QIATAASVAPAMALAVPEALVLGLGQNGQGEITRGHRALDAALAACDAAVIGPGMASTTT
EEEHHHHHHHHHHHHHHHHHEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHH
ATALVKLAAAKAVCPLVLDAGALSRSLRAPPGRPFVLTPHAGEMATLAGDDKAAVEAAPG
HHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCEEECCCCCCEEEECCCCCCEEECCCC
EYALAFAQKMRSVVIVKGADSFIAGPDGALWVHRGGVPGLGTSGSGDTLAGLIAGFAARG
HHHHHHHHHHCEEEEEECCCCEEECCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHCC
SDALTAALWGVFVHAVAGKQLSRRIGTVGFLAREIPQEVPGILDRLSRK
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969509; 9384377 [H]