| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21241862
Identifier: 21241862
GI number: 21241862
Start: 1257152
End: 1257832
Strand: Reverse
Name: 21241862
Synonym: XAC1106
Alternate gene names: NA
Gene position: 1257832-1257152 (Counterclockwise)
Preceding gene: 77748559
Following gene: 21241861
Centisome position: 24.3
GC content: 50.07
Gene sequence:
>681_bases ATGACTGAGCCCAAATACAGTCCAATCCCAAGCACCTTTCAGATGCTCCAAAAGATCAAGCGCCCCGAGAGAGCAGGAAA GCTTGAGCGCTTTGAAAAATACATATTTCGTGGAATGGTGGCTCTTTTACTTTTTGCCTTCGGGGTGGTTGCAGCTAGCA ACCTTGCATGGATTAGCAACACAAATGCCAAGAATGTCTTGATAGTGGCACTACCGGCATTAGTGGCTGTCTTTCTCGTC TTTGGGCTTCTTCAGATCATTCAGGTCATTGTGGCGTGGAAGGAGGGCTATGAACCGATGGCAGACCGAATCGACACGGC TATCTCCAGAGAGAGCGAGATTATGGACGAACTCGGCACATGCAACCCGCAGACTCTCCGAGAGCGCTCAAAACACATAG ACCTTGAAAACAAACTATTGACTCGCCGGGCAGGACTATCCACGTTCTTTGGTGCGATTAGCGTCGTGTTGGTCAATCTT TTCGACGCTGGTGAGAAGGTCAACATATGGTCTAACCCAGCCAACGCCAAAGTATTTGTTTACGCTGGAAGCCTTGGCAT ACTCATCGGCTCTGTCGTGGTGTTTATCTTGGCCGGAAAGCTTGAGCGCATTGCAGGACTGCTCGCACTAGCGGCGGATC GTATTGAACAGAAGCCTGGGCCAGGGAAAGTGATTGGCTAA
Upstream 100 bases:
>100_bases CTGACGGATGGCCGCAGTAGAAATATAAGCTGATTATTTTAGTCGCAGCCGGTGAGACCGTTTTGACGAAAATCGCGATC ATTCAAGCAGGGGGCCAAAA
Downstream 100 bases:
>100_bases TGCATCACGTCGCGCCACCCCGCCCCGCCCCCATTCCTAAATTCGCATACAAGACATCGAATTTCGGCGCGCATTCAAAT TTGTGAAACACGGCTCGAAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 226; Mature: 225
Protein sequence:
>226_residues MTEPKYSPIPSTFQMLQKIKRPERAGKLERFEKYIFRGMVALLLFAFGVVAASNLAWISNTNAKNVLIVALPALVAVFLV FGLLQIIQVIVAWKEGYEPMADRIDTAISRESEIMDELGTCNPQTLRERSKHIDLENKLLTRRAGLSTFFGAISVVLVNL FDAGEKVNIWSNPANAKVFVYAGSLGILIGSVVVFILAGKLERIAGLLALAADRIEQKPGPGKVIG
Sequences:
>Translated_226_residues MTEPKYSPIPSTFQMLQKIKRPERAGKLERFEKYIFRGMVALLLFAFGVVAASNLAWISNTNAKNVLIVALPALVAVFLV FGLLQIIQVIVAWKEGYEPMADRIDTAISRESEIMDELGTCNPQTLRERSKHIDLENKLLTRRAGLSTFFGAISVVLVNL FDAGEKVNIWSNPANAKVFVYAGSLGILIGSVVVFILAGKLERIAGLLALAADRIEQKPGPGKVIG >Mature_225_residues TEPKYSPIPSTFQMLQKIKRPERAGKLERFEKYIFRGMVALLLFAFGVVAASNLAWISNTNAKNVLIVALPALVAVFLVF GLLQIIQVIVAWKEGYEPMADRIDTAISRESEIMDELGTCNPQTLRERSKHIDLENKLLTRRAGLSTFFGAISVVLVNLF DAGEKVNIWSNPANAKVFVYAGSLGILIGSVVVFILAGKLERIAGLLALAADRIEQKPGPGKVIG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24771; Mature: 24639
Theoretical pI: Translated: 10.05; Mature: 10.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEPKYSPIPSTFQMLQKIKRPERAGKLERFEKYIFRGMVALLLFAFGVVAASNLAWISN CCCCCCCCCCHHHHHHHHHHCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEC TNAKNVLIVALPALVAVFLVFGLLQIIQVIVAWKEGYEPMADRIDTAISRESEIMDELGT CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCC CNPQTLRERSKHIDLENKLLTRRAGLSTFFGAISVVLVNLFDAGEKVNIWSNPANAKVFV CCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEE YAGSLGILIGSVVVFILAGKLERIAGLLALAADRIEQKPGPGKVIG EECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure TEPKYSPIPSTFQMLQKIKRPERAGKLERFEKYIFRGMVALLLFAFGVVAASNLAWISN CCCCCCCCCHHHHHHHHHHCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEC TNAKNVLIVALPALVAVFLVFGLLQIIQVIVAWKEGYEPMADRIDTAISRESEIMDELGT CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCC CNPQTLRERSKHIDLENKLLTRRAGLSTFFGAISVVLVNLFDAGEKVNIWSNPANAKVFV CCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEE YAGSLGILIGSVVVFILAGKLERIAGLLALAADRIEQKPGPGKVIG EECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA