| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is ppx [H]
Identifier: 21241804
GI number: 21241804
Start: 1198091
End: 1199617
Strand: Reverse
Name: ppx [H]
Synonym: XAC1039
Alternate gene names: 21241804
Gene position: 1199617-1198091 (Counterclockwise)
Preceding gene: 21241805
Following gene: 21241803
Centisome position: 23.18
GC content: 65.62
Gene sequence:
>1527_bases ATGCCAATGCCCTCCCCCACGATTCCGCCCCTGCGCGATGGCGATTTTCTCGCCGCCATCGACCTAGGCTCCAACAGTTT CCACATGGTCATTGCGCGCTACCTGATGGGTCAGCTGCGTGTCGTCGATCGCCTGCGCGAGACCGTGCGCATGGCCGATG GCCTGGATGGCAAAGGTGGGCTCTCCAACGAAGCGCGTCAGCGCGCACTGGAATGCCTGGCGCGGTTTGGCCAGCGCATT CGCGACGTGCCTTCGCTACGCGTGCGCGCGCTAGCGACCAACACGGTGCGTCAGCTGCGTTCGCCGCAAGCGTTTTTGAT GCCGGCCGAAACCGCGCTGGGTCATGCGATCGAAGTGGTCAGCGGGCGCGAGGAAGCACGCCTGATCTATCTGGGCGTGG CGCATGCGCAACCGCCCAAGCCCGACCAACGCCGGCTGGTGATCGACATCGGCGGCGGCTCGACCGAGTTCATCATCGGC CGCGGGTTTCAGACGCTGGAACGCGAGAGTCTGCAGGCCGGATGCATTGCCAGCACGCGGCGGTTTTTCCCGGGCGGCAA ATTGTCGAAGAAGAAATGGAAGGACGCGCTGACCGAGATCGGCGCCGAGTTCCAGCAGTTCGCCGGCCAGTACAAGGCGC TGGGCTGGCATGAGGCGATCGGCTCGTCCGGCACGCACAAGGCCATCGGCGAGATGTGCGCTGCAATGAAGCTGACCAAG GGGGCGATCACGGCGCAGGCGCTGCCGGCGCTGCGCGAGGAGTTGCTCAAGGCCAAGCGCATCGAAGACATCCAGCTGCC CGGTCTGGCCGCCGAACGGCGGCCCATCATCGCCGGTGGCATCTTGGTGCTGGAAGCTGCGTTCCAGGCGCTGGGGCTGG AGAAACTGATGGTCAGCAAGGCGGCGATGCGCGAAGGCATCCTGTACGACATGCTTGGCCGCGGCGGCGAAAACGACCCG CGCGACAGTTCGGTGACCTCGCTGATGCAACGCTACGGCATCGACGAAGTACAGGCGCAGCGCGTGGAAGCCACCGCCTG CCGCCTGTTCGACCAGGTCTGCGAATCCTGGCAACTGGATGGCGACGACGCGCAGGTACTGCGCCGTGCCGCGCGACTGC ACGAGCTGGGGCTGATCATTGCGCACAGCCAGTACCACGTGCACGGCAGCTACATCCTGGAACACTCGGATATCGCGGGT TTTTCGCGGCAGGAACAGCAGGTGCTGGCCTCGCTGGTGCGCACGCACCGGCGCAATGTGCCCAAGACCGCCTTCGATGC GCTGCCCGACCGCCTGCTGCTGCCGACCCGACGCAAGGCCGCACTGCTGCGACTGGCGGTGTTGCTGCACCGCGCGCATG AGTCCGACCCGATCCCGACCCTGGAACTCACCGCCGACGACACCCGGTTGTCGTTGATCCTGTCGCAAAGCTGGATCGAC TCGCGCCCGCTGCTGCGCGCCGACCTGATCGGCGAAGTCGACAGCATGGCCGGGCTGGGAATTGCGTTCAAACCGTTTGT GACCTGA
Upstream 100 bases:
>100_bases CGCCCGCCCCCAGCGCTTCCAATACCGAGCGCGTGCGCCTGCAGCTGGGCGCACGCATGGCCTCTCACGTGGCCAACAGC CCATCGGCTACCATGCGGCC
Downstream 100 bases:
>100_bases GGCCTGCGGCCTCAGGCGGGAATCGGGAATCGGGAATCGGGAATAGTCCGCCACGGGGCTCTTAGAAGTTTCTGAGTGGT GTCGATGGCGCCGAACCGGT
Product: exopolyphosphatase
Products: NA
Alternate protein names: ExopolyPase; Metaphosphatase [H]
Number of amino acids: Translated: 508; Mature: 507
Protein sequence:
>508_residues MPMPSPTIPPLRDGDFLAAIDLGSNSFHMVIARYLMGQLRVVDRLRETVRMADGLDGKGGLSNEARQRALECLARFGQRI RDVPSLRVRALATNTVRQLRSPQAFLMPAETALGHAIEVVSGREEARLIYLGVAHAQPPKPDQRRLVIDIGGGSTEFIIG RGFQTLERESLQAGCIASTRRFFPGGKLSKKKWKDALTEIGAEFQQFAGQYKALGWHEAIGSSGTHKAIGEMCAAMKLTK GAITAQALPALREELLKAKRIEDIQLPGLAAERRPIIAGGILVLEAAFQALGLEKLMVSKAAMREGILYDMLGRGGENDP RDSSVTSLMQRYGIDEVQAQRVEATACRLFDQVCESWQLDGDDAQVLRRAARLHELGLIIAHSQYHVHGSYILEHSDIAG FSRQEQQVLASLVRTHRRNVPKTAFDALPDRLLLPTRRKAALLRLAVLLHRAHESDPIPTLELTADDTRLSLILSQSWID SRPLLRADLIGEVDSMAGLGIAFKPFVT
Sequences:
>Translated_508_residues MPMPSPTIPPLRDGDFLAAIDLGSNSFHMVIARYLMGQLRVVDRLRETVRMADGLDGKGGLSNEARQRALECLARFGQRI RDVPSLRVRALATNTVRQLRSPQAFLMPAETALGHAIEVVSGREEARLIYLGVAHAQPPKPDQRRLVIDIGGGSTEFIIG RGFQTLERESLQAGCIASTRRFFPGGKLSKKKWKDALTEIGAEFQQFAGQYKALGWHEAIGSSGTHKAIGEMCAAMKLTK GAITAQALPALREELLKAKRIEDIQLPGLAAERRPIIAGGILVLEAAFQALGLEKLMVSKAAMREGILYDMLGRGGENDP RDSSVTSLMQRYGIDEVQAQRVEATACRLFDQVCESWQLDGDDAQVLRRAARLHELGLIIAHSQYHVHGSYILEHSDIAG FSRQEQQVLASLVRTHRRNVPKTAFDALPDRLLLPTRRKAALLRLAVLLHRAHESDPIPTLELTADDTRLSLILSQSWID SRPLLRADLIGEVDSMAGLGIAFKPFVT >Mature_507_residues PMPSPTIPPLRDGDFLAAIDLGSNSFHMVIARYLMGQLRVVDRLRETVRMADGLDGKGGLSNEARQRALECLARFGQRIR DVPSLRVRALATNTVRQLRSPQAFLMPAETALGHAIEVVSGREEARLIYLGVAHAQPPKPDQRRLVIDIGGGSTEFIIGR GFQTLERESLQAGCIASTRRFFPGGKLSKKKWKDALTEIGAEFQQFAGQYKALGWHEAIGSSGTHKAIGEMCAAMKLTKG AITAQALPALREELLKAKRIEDIQLPGLAAERRPIIAGGILVLEAAFQALGLEKLMVSKAAMREGILYDMLGRGGENDPR DSSVTSLMQRYGIDEVQAQRVEATACRLFDQVCESWQLDGDDAQVLRRAARLHELGLIIAHSQYHVHGSYILEHSDIAGF SRQEQQVLASLVRTHRRNVPKTAFDALPDRLLLPTRRKAALLRLAVLLHRAHESDPIPTLELTADDTRLSLILSQSWIDS RPLLRADLIGEVDSMAGLGIAFKPFVT
Specific function: Degradation of inorganic polyphosphates. Orthophosphate is released progressively from the ends of polyphosphate [H]
COG id: COG0248
COG function: function code FP; Exopolyphosphatase
Gene ontology:
Cell location: Membrane-Associated [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the gppA/ppx family [H]
Homologues:
Organism=Escherichia coli, GI1788848, Length=494, Percent_Identity=38.8663967611336, Blast_Score=324, Evalue=9e-90, Organism=Escherichia coli, GI48994966, Length=470, Percent_Identity=35.1063829787234, Blast_Score=287, Evalue=1e-78,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022371 - InterPro: IPR003695 [H]
Pfam domain/function: PF02541 Ppx-GppA [H]
EC number: =3.6.1.11 [H]
Molecular weight: Translated: 55938; Mature: 55807
Theoretical pI: Translated: 9.37; Mature: 9.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPMPSPTIPPLRDGDFLAAIDLGSNSFHMVIARYLMGQLRVVDRLRETVRMADGLDGKGG CCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC LSNEARQRALECLARFGQRIRDVPSLRVRALATNTVRQLRSPQAFLMPAETALGHAIEVV CCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHH SGREEARLIYLGVAHAQPPKPDQRRLVIDIGGGSTEFIIGRGFQTLERESLQAGCIASTR CCCCCCEEEEEEECCCCCCCCCCCEEEEEECCCCEEEEEECCHHHHHHHHHHHHHHHHHH RFFPGGKLSKKKWKDALTEIGAEFQQFAGQYKALGWHEAIGSSGTHKAIGEMCAAMKLTK HCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCHHHHHHHHHHHHHHH GAITAQALPALREELLKAKRIEDIQLPGLAAERRPIIAGGILVLEAAFQALGLEKLMVSK HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHH AAMREGILYDMLGRGGENDPRDSSVTSLMQRYGIDEVQAQRVEATACRLFDQVCESWQLD HHHHCCHHHHHHCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCC GDDAQVLRRAARLHELGLIIAHSQYHVHGSYILEHSDIAGFSRQEQQVLASLVRTHRRNV CCHHHHHHHHHHHHHHCEEEEECEEEECCEEEEECCCCCCCCHHHHHHHHHHHHHHHCCC PKTAFDALPDRLLLPTRRKAALLRLAVLLHRAHESDPIPTLELTADDTRLSLILSQSWID CHHHHHHCCCHHCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCEEEEEEEHHCCC SRPLLRADLIGEVDSMAGLGIAFKPFVT CCCCHHHHHHHHHHHHCCCCEECCCCCC >Mature Secondary Structure PMPSPTIPPLRDGDFLAAIDLGSNSFHMVIARYLMGQLRVVDRLRETVRMADGLDGKGG CCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC LSNEARQRALECLARFGQRIRDVPSLRVRALATNTVRQLRSPQAFLMPAETALGHAIEVV CCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHH SGREEARLIYLGVAHAQPPKPDQRRLVIDIGGGSTEFIIGRGFQTLERESLQAGCIASTR CCCCCCEEEEEEECCCCCCCCCCCEEEEEECCCCEEEEEECCHHHHHHHHHHHHHHHHHH RFFPGGKLSKKKWKDALTEIGAEFQQFAGQYKALGWHEAIGSSGTHKAIGEMCAAMKLTK HCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCHHHHHHHHHHHHHHH GAITAQALPALREELLKAKRIEDIQLPGLAAERRPIIAGGILVLEAAFQALGLEKLMVSK HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHH AAMREGILYDMLGRGGENDPRDSSVTSLMQRYGIDEVQAQRVEATACRLFDQVCESWQLD HHHHCCHHHHHHCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCC GDDAQVLRRAARLHELGLIIAHSQYHVHGSYILEHSDIAGFSRQEQQVLASLVRTHRRNV CCHHHHHHHHHHHHHHCEEEEECEEEECCEEEEECCCCCCCCHHHHHHHHHHHHHHHCCC PKTAFDALPDRLLLPTRRKAALLRLAVLLHRAHESDPIPTLELTADDTRLSLILSQSWID CHHHHHHCCCHHCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCEEEEEEEHHCCC SRPLLRADLIGEVDSMAGLGIAFKPFVT CCCCHHHHHHHHHHHHCCCCEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 10382967; 10984043 [H]