| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21241685
Identifier: 21241685
GI number: 21241685
Start: 1077197
End: 1079554
Strand: Direct
Name: 21241685
Synonym: XAC0915
Alternate gene names: NA
Gene position: 1077197-1079554 (Clockwise)
Preceding gene: 77748554
Following gene: 21241687
Centisome position: 20.81
GC content: 66.2
Gene sequence:
>2358_bases ATGACTTTTCAGCCCAGTCCGTCGGGACATCCGGGCCGTGACCAACGCTTGCTCGAGCAGGCGCACGACGTTTTCGTGCC GGCGCTCGCGCAGGTTTTTGCTGCTGCAGTTGCGCATTTCGACGATGTGCTGTTCGACCGTGCCGAATCCGCTGGCGCCT CGCAGTTGCTGTTTCTCGATGGCATGCGCGAATTGCGCCGCAAGCGCGAAGAGGTCGCCCGCCAGTTCCGCCAACAGCTG GAAGATGGCTGGCAGGCGTTGGTGCTCGGCACGCCGTTGTCGGCCGAAGTGGTGCTGGCCGGCGACATGGGCACCGGCCC GCTGAGTCTGGTGCCCGAGCACGTGCTCGAATCGCGGCTGGCAGTGCGCAATCTGGCCACGGTGCTGTTGCGCGATTTCA AACAGGTGCTGGCACGGGTGGACCGCCGCCTGGGCTGGATCGCCGGCGGGCTGGAGTTGATGGCCGACACCAACCCGATT GGCCCCGAACATCTGGGCGTGGCGATCCACGAAGCCTTCGCCACCTGCGACCTGGCGCCGGAAGTGCGACTGGTGTTGAT CAAGCTGTGCGAGCGCGATCTGGCCGAGCCGATCGGCAAGTTGTACGCACGCCTGGACGAAACCCTGGCCAAGGCCGGGG TGATGCCGGAAATTTCGCAGGCCAAGCGCGCACCGCCGCGCATGCAGTCGCGTGGCGAGATGCCGGATGAGCGCGTCCAG GCCGAGCCGCAGGGCGGTCACGCCGAGATGGGCGGCGACAACCAGGGTGATCAGTACGCACCGGCCTGGGCCAACCGTTT TCTTGACCGCTGGGCACATAGCCGCGGCCGCATGCAGGCCGCGACGCAACGCGGCCATGCCGATGGCGGCGGGGATGGCG GCATGGACGGCGAGGCCGACCATCCCGGCGGCAGCCAGGGCATGCTGCTCGAGGCGCTGCACGAATTGCTGCAACAGACC CGCAGCGTGCGCGACACCGCCGCGTCTGCCGCCACCGTCGCGGTAGGGCAGCAACGCCCGTTGAGCCAGCGCGAAATGAT GTCGGTGCTGTCGCTGCTGCAGGCCACGCCCAGCGCGACGCTGCAGGCGGCCATCGGCGACGACACCGAATCGCTTGCGC AGCGGTTGAAGAACGAGGTGCTTTCCAGCGCCACGCGACTGGGCGTGGACCCGGCCACCGCAAAACTCGACCCGATGGAC GAAGATGCCATCGACCTGGTCGGCATGCTGTTCGATGTAATGCTGGACGAGCGCGATCTGGAAAATCGTTCGCGCGAAAT GATCGGCCGCCTGGTGGTGCCGTTCGTCAAGGTCGCACTGCTGGACCGCAAGATGTTCGTGCAGAAGACCCACCCCGCGC GGCGCCTGCTCAACTCGCTGGCCGAGGCCTGCGAAGGCAACAACGGCGACAGCGCTGCCGAGCGCGTGCTGATGGGCAAG GTCGAAGAAATCGTCGACCGCCTGGTGGCCGAATTCAACGAAAATCTGGCGATCTTCCTCACCCTGGAAGAAGAATTCCG CGACTTCCTGTCGCAGCACCGGCGCCGGGTGGAAATTGCCGAGCGTCGTGCCACCGAAACCCAGCGCGGGCAGGAAAAGC TCGAACTGGCGCGCAGCCGCGCGCTGTCGGAACTGGAGCAGCGTGCGCCCGAAGGCGCGGGCCTGCCCAAGGCGGTGGAC GACTTTCTGCGCCAGCCGTGGCTGCATCACCTGACCATGGCGATCCTGCGCGACGGCGAGGAAGGTCCCGGCACCATCGA GGCCCTGGCGGTGGCCGACGGCGTACTGGAAGAACTGGCCGAAGCGCGCCGTCATATCGTCGGCAAGCCATGGCTGCAGG TCTGGCAGCCGGCGTTGCACCGCGTGTTCGCAAGCGTAGGCCTGCACGGGGATGCGGTGGTGGTGGCGATCACCGCCTTG CACGACACCTTGCAGGCGATCGCCGAAGCGCGCCCGGAACTGGAAAAAGCCCTGCCGGAACTGCCGCAGGTCAATCTTCC CCCACCGGCTACCGAAAGCGTCAGCGTGGTGCTGGGTGCCGAAGCGGTCGCGCAGAGCATCGACAGCGCCGATGCCGAAC GTTTCCGAGCGATGGATATCGGCACGTGGCTGGATTTTGTCGACAAGGACGGCAAGGTGCAGGCCGGCAAGCTGTCGTGG GTGAGCCCGATTTCGCAGCGTCTGCTATTCGTCAATCGACGCGGCGTGCGTTTCTGCGTCGCCTCGCCAGAAGAACTGGC GGTGATGGTGCGCCTGGGCCGCCTGCGCGAGCACATCAACGACGGCGCCTTCGACAGCGCGATGCAGGGTGTGATCGATC GACTGGATCCGTTGCAGAACAACAGCACGGTGCACTGA
Upstream 100 bases:
>100_bases ATGCGCGAACCGCCTACCATGCACAGGCGGAATTTGGGGCCGCGTCTGTTTTTTCTCGTTCGAAAATTTTCACGCCTGCA GAGGCGGGGAGCCTTTGCGC
Downstream 100 bases:
>100_bases GCGGTCCCACGTGCGTATGTGATTAACGGCCGTGCGCTTTCGACGCTGCGGTGCAGGGCGCAAGTGGCTGGACCCATTGC ACAACCGCGGTGCGGTGCGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 785; Mature: 784
Protein sequence:
>785_residues MTFQPSPSGHPGRDQRLLEQAHDVFVPALAQVFAAAVAHFDDVLFDRAESAGASQLLFLDGMRELRRKREEVARQFRQQL EDGWQALVLGTPLSAEVVLAGDMGTGPLSLVPEHVLESRLAVRNLATVLLRDFKQVLARVDRRLGWIAGGLELMADTNPI GPEHLGVAIHEAFATCDLAPEVRLVLIKLCERDLAEPIGKLYARLDETLAKAGVMPEISQAKRAPPRMQSRGEMPDERVQ AEPQGGHAEMGGDNQGDQYAPAWANRFLDRWAHSRGRMQAATQRGHADGGGDGGMDGEADHPGGSQGMLLEALHELLQQT RSVRDTAASAATVAVGQQRPLSQREMMSVLSLLQATPSATLQAAIGDDTESLAQRLKNEVLSSATRLGVDPATAKLDPMD EDAIDLVGMLFDVMLDERDLENRSREMIGRLVVPFVKVALLDRKMFVQKTHPARRLLNSLAEACEGNNGDSAAERVLMGK VEEIVDRLVAEFNENLAIFLTLEEEFRDFLSQHRRRVEIAERRATETQRGQEKLELARSRALSELEQRAPEGAGLPKAVD DFLRQPWLHHLTMAILRDGEEGPGTIEALAVADGVLEELAEARRHIVGKPWLQVWQPALHRVFASVGLHGDAVVVAITAL HDTLQAIAEARPELEKALPELPQVNLPPPATESVSVVLGAEAVAQSIDSADAERFRAMDIGTWLDFVDKDGKVQAGKLSW VSPISQRLLFVNRRGVRFCVASPEELAVMVRLGRLREHINDGAFDSAMQGVIDRLDPLQNNSTVH
Sequences:
>Translated_785_residues MTFQPSPSGHPGRDQRLLEQAHDVFVPALAQVFAAAVAHFDDVLFDRAESAGASQLLFLDGMRELRRKREEVARQFRQQL EDGWQALVLGTPLSAEVVLAGDMGTGPLSLVPEHVLESRLAVRNLATVLLRDFKQVLARVDRRLGWIAGGLELMADTNPI GPEHLGVAIHEAFATCDLAPEVRLVLIKLCERDLAEPIGKLYARLDETLAKAGVMPEISQAKRAPPRMQSRGEMPDERVQ AEPQGGHAEMGGDNQGDQYAPAWANRFLDRWAHSRGRMQAATQRGHADGGGDGGMDGEADHPGGSQGMLLEALHELLQQT RSVRDTAASAATVAVGQQRPLSQREMMSVLSLLQATPSATLQAAIGDDTESLAQRLKNEVLSSATRLGVDPATAKLDPMD EDAIDLVGMLFDVMLDERDLENRSREMIGRLVVPFVKVALLDRKMFVQKTHPARRLLNSLAEACEGNNGDSAAERVLMGK VEEIVDRLVAEFNENLAIFLTLEEEFRDFLSQHRRRVEIAERRATETQRGQEKLELARSRALSELEQRAPEGAGLPKAVD DFLRQPWLHHLTMAILRDGEEGPGTIEALAVADGVLEELAEARRHIVGKPWLQVWQPALHRVFASVGLHGDAVVVAITAL HDTLQAIAEARPELEKALPELPQVNLPPPATESVSVVLGAEAVAQSIDSADAERFRAMDIGTWLDFVDKDGKVQAGKLSW VSPISQRLLFVNRRGVRFCVASPEELAVMVRLGRLREHINDGAFDSAMQGVIDRLDPLQNNSTVH >Mature_784_residues TFQPSPSGHPGRDQRLLEQAHDVFVPALAQVFAAAVAHFDDVLFDRAESAGASQLLFLDGMRELRRKREEVARQFRQQLE DGWQALVLGTPLSAEVVLAGDMGTGPLSLVPEHVLESRLAVRNLATVLLRDFKQVLARVDRRLGWIAGGLELMADTNPIG PEHLGVAIHEAFATCDLAPEVRLVLIKLCERDLAEPIGKLYARLDETLAKAGVMPEISQAKRAPPRMQSRGEMPDERVQA EPQGGHAEMGGDNQGDQYAPAWANRFLDRWAHSRGRMQAATQRGHADGGGDGGMDGEADHPGGSQGMLLEALHELLQQTR SVRDTAASAATVAVGQQRPLSQREMMSVLSLLQATPSATLQAAIGDDTESLAQRLKNEVLSSATRLGVDPATAKLDPMDE DAIDLVGMLFDVMLDERDLENRSREMIGRLVVPFVKVALLDRKMFVQKTHPARRLLNSLAEACEGNNGDSAAERVLMGKV EEIVDRLVAEFNENLAIFLTLEEEFRDFLSQHRRRVEIAERRATETQRGQEKLELARSRALSELEQRAPEGAGLPKAVDD FLRQPWLHHLTMAILRDGEEGPGTIEALAVADGVLEELAEARRHIVGKPWLQVWQPALHRVFASVGLHGDAVVVAITALH DTLQAIAEARPELEKALPELPQVNLPPPATESVSVVLGAEAVAQSIDSADAERFRAMDIGTWLDFVDKDGKVQAGKLSWV SPISQRLLFVNRRGVRFCVASPEELAVMVRLGRLREHINDGAFDSAMQGVIDRLDPLQNNSTVH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 86146; Mature: 86015
Theoretical pI: Translated: 5.02; Mature: 5.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFQPSPSGHPGRDQRLLEQAHDVFVPALAQVFAAAVAHFDDVLFDRAESAGASQLLFLD CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH GMRELRRKREEVARQFRQQLEDGWQALVLGTPLSAEVVLAGDMGTGPLSLVPEHVLESRL HHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCEEEECCCCCCCHHHHHHHHHHHHH AVRNLATVLLRDFKQVLARVDRRLGWIAGGLELMADTNPIGPEHLGVAIHEAFATCDLAP HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCHHHHHHHHHHHHHHCCCCH EVRLVLIKLCERDLAEPIGKLYARLDETLAKAGVMPEISQAKRAPPRMQSRGEMPDERVQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCHHHCCCCCHHHHC AEPQGGHAEMGGDNQGDQYAPAWANRFLDRWAHSRGRMQAATQRGHADGGGDGGMDGEAD CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCCCCC HPGGSQGMLLEALHELLQQTRSVRDTAASAATVAVGQQRPLSQREMMSVLSLLQATPSAT CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCHH LQAAIGDDTESLAQRLKNEVLSSATRLGVDPATAKLDPMDEDAIDLVGMLFDVMLDERDL HHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCHHHH ENRSREMIGRLVVPFVKVALLDRKMFVQKTHPARRLLNSLAEACEGNNGDSAAERVLMGK HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHH VEEIVDRLVAEFNENLAIFLTLEEEFRDFLSQHRRRVEIAERRATETQRGQEKLELARSR HHHHHHHHHHHHCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALSELEQRAPEGAGLPKAVDDFLRQPWLHHLTMAILRDGEEGPGTIEALAVADGVLEELA HHHHHHHHCCCCCCCCHHHHHHHHCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH EARRHIVGKPWLQVWQPALHRVFASVGLHGDAVVVAITALHDTLQAIAEARPELEKALPE HHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHCCC LPQVNLPPPATESVSVVLGAEAVAQSIDSADAERFRAMDIGTWLDFVDKDGKVQAGKLSW CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCHH VSPISQRLLFVNRRGVRFCVASPEELAVMVRLGRLREHINDGAFDSAMQGVIDRLDPLQN HHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCC NSTVH CCCCC >Mature Secondary Structure TFQPSPSGHPGRDQRLLEQAHDVFVPALAQVFAAAVAHFDDVLFDRAESAGASQLLFLD CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH GMRELRRKREEVARQFRQQLEDGWQALVLGTPLSAEVVLAGDMGTGPLSLVPEHVLESRL HHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCEEEECCCCCCCHHHHHHHHHHHHH AVRNLATVLLRDFKQVLARVDRRLGWIAGGLELMADTNPIGPEHLGVAIHEAFATCDLAP HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCHHHHHHHHHHHHHHCCCCH EVRLVLIKLCERDLAEPIGKLYARLDETLAKAGVMPEISQAKRAPPRMQSRGEMPDERVQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCHHHCCCCCHHHHC AEPQGGHAEMGGDNQGDQYAPAWANRFLDRWAHSRGRMQAATQRGHADGGGDGGMDGEAD CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCCCCC HPGGSQGMLLEALHELLQQTRSVRDTAASAATVAVGQQRPLSQREMMSVLSLLQATPSAT CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCHH LQAAIGDDTESLAQRLKNEVLSSATRLGVDPATAKLDPMDEDAIDLVGMLFDVMLDERDL HHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCHHHH ENRSREMIGRLVVPFVKVALLDRKMFVQKTHPARRLLNSLAEACEGNNGDSAAERVLMGK HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHH VEEIVDRLVAEFNENLAIFLTLEEEFRDFLSQHRRRVEIAERRATETQRGQEKLELARSR HHHHHHHHHHHHCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALSELEQRAPEGAGLPKAVDDFLRQPWLHHLTMAILRDGEEGPGTIEALAVADGVLEELA HHHHHHHHCCCCCCCCHHHHHHHHCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH EARRHIVGKPWLQVWQPALHRVFASVGLHGDAVVVAITALHDTLQAIAEARPELEKALPE HHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHCCC LPQVNLPPPATESVSVVLGAEAVAQSIDSADAERFRAMDIGTWLDFVDKDGKVQAGKLSW CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCHH VSPISQRLLFVNRRGVRFCVASPEELAVMVRLGRLREHINDGAFDSAMQGVIDRLDPLQN HHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCC NSTVH CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA