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The map label for this gene is ytfF [H]

Identifier: 21241662

GI number: 21241662

Start: 1053610

End: 1054539

Strand: Reverse

Name: ytfF [H]

Synonym: XAC0892

Alternate gene names: 21241662

Gene position: 1054539-1053610 (Counterclockwise)

Preceding gene: 21241663

Following gene: 21241661

Centisome position: 20.38

GC content: 67.53

Gene sequence:

>930_bases
ATGCGTGAACGCTTGATGGTGGGTGTCGCCTGCGGAATCGGTGCGGGTGCGCTGTGGGGGCTGGTGTTTCTGGCACCGCA
ATTGCTGGGCGCTTTTACGCCGCTGCAATTGGCGGTGGCGCGGTATCTCTCGTATGGCGTGGTGGCGGCCTTGCTGCTGG
CGCCACGCGCGCGGCAGACCGCTGCCCGGCTGGGCGCTGCCGAATGGTGGGCACTGGTGCGTTTGAGCCTGATGGGGAAT
CTGGTTTATTACGTGCTGCTTGGCAGCGCCGTGCAGTGGGCGGGCAGCGCGGCAACTGCGTTGATCATCGGGCTGTTGCC
GGTGGTGGTCACCGTGATAGGGACGCGTGCCGCCGGTGCGGTGCAATTGCGACGTCTGGCCGCGCCCTGCGTGCTGTGCG
TGATCGGCGTGACATTGGTGGCACTGGACACAGTGCAGGACGACTCCGGCCAGCAGGCGAACGATCGCCTGACGCGGATC
GCCGGCCTGCTGTGCGCGGCGGGTGCGCTGGTGTCGTGGTCGGCCTATTCGATCGCCAACGCACGCTGGTTGCGGCGGCG
CCCGGATCTGTCCGGGGGCGACTGGTCGCTGCTGACCGGCGTGGTGACCGGCGCACTGGCGTTGTTGCTGGCGCCGGCGG
CCCTCATCGGCAGTGCAGCGCATGCACCGCTCGAGTGGGCCAGTTTCTGGGGCGTGTCGCTGTTGCTGGGCATCCTGGCC
TCGATCATCGGCAACGCGCTGTGGAATCGTGCCAGCCGCGTGCTGCCGCTGACCCTGGTCGGGCAGATGATCGTGTTCGA
GACGGTGTTTGCGCTGCTGTACGGCTTCGCCTGGGAAATGCGCCTGCCTACGCCACTGGAGCTGGCCGCCATCGCCTGCC
TGCTGGTCGGCGTGCTGTGGTGCGCAGCACTGCATGCGGAAGCGAAATGA

Upstream 100 bases:

>100_bases
ACCGCTGCGGCGTGCCGGTGTTGCATACATCTGCAGCGCTCGTCTTGCTCAACTCCCTGCCGCACGGCACGCTGCAATGC
ACGCCCTGAGGAACAGCACG

Downstream 100 bases:

>100_bases
CCTCGGCACCTGATGCGCGCATCGGCCTAGATTGCAGGCTGTGTCAGCCAGCGATGCCGCCATGTGCCTCCCACCGCCAT
GCTTACGCCCACCTGCAAAC

Product: integral membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 309; Mature: 309

Protein sequence:

>309_residues
MRERLMVGVACGIGAGALWGLVFLAPQLLGAFTPLQLAVARYLSYGVVAALLLAPRARQTAARLGAAEWWALVRLSLMGN
LVYYVLLGSAVQWAGSAATALIIGLLPVVVTVIGTRAAGAVQLRRLAAPCVLCVIGVTLVALDTVQDDSGQQANDRLTRI
AGLLCAAGALVSWSAYSIANARWLRRRPDLSGGDWSLLTGVVTGALALLLAPAALIGSAAHAPLEWASFWGVSLLLGILA
SIIGNALWNRASRVLPLTLVGQMIVFETVFALLYGFAWEMRLPTPLELAAIACLLVGVLWCAALHAEAK

Sequences:

>Translated_309_residues
MRERLMVGVACGIGAGALWGLVFLAPQLLGAFTPLQLAVARYLSYGVVAALLLAPRARQTAARLGAAEWWALVRLSLMGN
LVYYVLLGSAVQWAGSAATALIIGLLPVVVTVIGTRAAGAVQLRRLAAPCVLCVIGVTLVALDTVQDDSGQQANDRLTRI
AGLLCAAGALVSWSAYSIANARWLRRRPDLSGGDWSLLTGVVTGALALLLAPAALIGSAAHAPLEWASFWGVSLLLGILA
SIIGNALWNRASRVLPLTLVGQMIVFETVFALLYGFAWEMRLPTPLELAAIACLLVGVLWCAALHAEAK
>Mature_309_residues
MRERLMVGVACGIGAGALWGLVFLAPQLLGAFTPLQLAVARYLSYGVVAALLLAPRARQTAARLGAAEWWALVRLSLMGN
LVYYVLLGSAVQWAGSAATALIIGLLPVVVTVIGTRAAGAVQLRRLAAPCVLCVIGVTLVALDTVQDDSGQQANDRLTRI
AGLLCAAGALVSWSAYSIANARWLRRRPDLSGGDWSLLTGVVTGALALLLAPAALIGSAAHAPLEWASFWGVSLLLGILA
SIIGNALWNRASRVLPLTLVGQMIVFETVFALLYGFAWEMRLPTPLELAAIACLLVGVLWCAALHAEAK

Specific function: Unknown

COG id: COG0697

COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 DUF6 domain [H]

Homologues:

Organism=Escherichia coli, GI226510990, Length=310, Percent_Identity=32.5806451612903, Blast_Score=134, Evalue=7e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 32410; Mature: 32410

Theoretical pI: Translated: 9.33; Mature: 9.33

Prosite motif: PS00041 HTH_ARAC_FAMILY_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRERLMVGVACGIGAGALWGLVFLAPQLLGAFTPLQLAVARYLSYGVVAALLLAPRARQT
CCCCEEEEHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHH
AARLGAAEWWALVRLSLMGNLVYYVLLGSAVQWAGSAATALIIGLLPVVVTVIGTRAAGA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHH
VQLRRLAAPCVLCVIGVTLVALDTVQDDSGQQANDRLTRIAGLLCAAGALVSWSAYSIAN
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ARWLRRRPDLSGGDWSLLTGVVTGALALLLAPAALIGSAAHAPLEWASFWGVSLLLGILA
HHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
SIIGNALWNRASRVLPLTLVGQMIVFETVFALLYGFAWEMRLPTPLELAAIACLLVGVLW
HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
CAALHAEAK
HHHHHHCCC
>Mature Secondary Structure
MRERLMVGVACGIGAGALWGLVFLAPQLLGAFTPLQLAVARYLSYGVVAALLLAPRARQT
CCCCEEEEHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHH
AARLGAAEWWALVRLSLMGNLVYYVLLGSAVQWAGSAATALIIGLLPVVVTVIGTRAAGA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHH
VQLRRLAAPCVLCVIGVTLVALDTVQDDSGQQANDRLTRIAGLLCAAGALVSWSAYSIAN
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ARWLRRRPDLSGGDWSLLTGVVTGALALLLAPAALIGSAAHAPLEWASFWGVSLLLGILA
HHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
SIIGNALWNRASRVLPLTLVGQMIVFETVFALLYGFAWEMRLPTPLELAAIACLLVGVLW
HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
CAALHAEAK
HHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]