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The map label for this gene is soxC [H]

Identifier: 21241624

GI number: 21241624

Start: 1014835

End: 1016139

Strand: Direct

Name: soxC [H]

Synonym: XAC0854

Alternate gene names: 21241624

Gene position: 1014835-1016139 (Clockwise)

Preceding gene: 21241623

Following gene: 21241625

Centisome position: 19.61

GC content: 70.5

Gene sequence:

>1305_bases
TTGGAGCTCCCCATGAATGCTCAAGCTGTCTTTCCCTCCGATACGTCGCCGCAGCTCGGCGCGCCGACCGATGCGGCGCT
GGCGCAGCGCTTCGATCCGGTGTTTGCGCGCATCGCCGAGGGCGCACTGGCGCGCGAGCGCGAGCGCATCCTGGCCCATG
AGCCGGTTGCCTGGCTGCGGGCGGCCGGCTTCGGCGCCGTGCGCGTGCCGCAGGCCCACGGCGGCCTCGGTGCGAGCCTG
CCGCAGCTGTTGCGACTATTGGCCCGGCTCGGCGAAGCCGATTCCAATCTGCCGCAGATCCTGCGTGCGCATTTCGGCTT
CGTGGAAGGCCTGTACGGCAGTACTGCAGACGATGCGGCGTTACGCGCGCGCTGGTTTCCGCGCGTGGCCGCCGGCGCGC
TCTTCGGGGCGGCCATGGCCGAGCGCGGCCCGGCCACCGAGAACACGCTGACGCTGCGTCGCGACGGGGCGCATTGGCAG
CTGGATGGCGAGAAGTTCTATTCCACCGGCACGCTCTACGCCGACTGGATCCTGGCGGCCGCCGTGGACGGTGGCGACCA
GCTCGCGCTCGCGGTGCCTGCCGATGCTCAGGGGGTGACGCGGATCGACGATTGGGACGGCTTCGGCCAGCGCCTGACCG
GCAGCGGCAGCACCCATTTCAGGGCGGTGCGGCTGCAGGACGAGCATGTGCTGCACCGGCATCCCGCCGGGCAGGCGCGG
CCGGACAACTATCTCACCGCGTTCTACCAGAGCGTGCACCTGGCGACCTTGACCGGGATCGCGCGTGCGGTGCTGCGCGA
TGGCGTGGAATTCGTGCGCGCCCGCACCCGCGTATTCGGCGTGCCCGGGCAAACGCGGCCGGCCGACGATCCACTGGTGC
AGCGGGTGGTCGGCCGCTTGTCGAGCCTGGCCTTCGCTGCAGACGCGGTGGTGGAGCAGGTCGGCGTCTCGTTGCAGCAG
GCCCACCTCGCGCATCATGCCGGCACCGCGTCAGAGGCCGATTACATCGCCGCCGATCTGGCCGCCTATCACGGCCAGCA
GGTGGTGTTGCCACTGGTGCTGGAGGCCAGCACGCTGGTCTTCGAGGTCGGTGGCGCCTCGGCGACCGCGCGTGAGCGTG
CGCTGGACCGGCATTGGCGCAACGCGCGCACCATCGCCTCGCATAACCCGGCGATCCTGCGCGAACGTGCGCTTGGCGAC
TGGCGATTGAACGGTCGTCGTCCACGCGAGGCGTGGTTCGCCGGCACCACATCCCAGAGTGCGGCCGGCGCAGATGCGAG
CGTGTCGACGGGAGCGACTGCATGA

Upstream 100 bases:

>100_bases
AGCAGGCCCTGCGGCATCGGCGTGCGGCCATGCCGCCGGCCACGCGTTACGCCTGGGGCCGCACGCATCCCGGCAGCCCC
TGGATCGCTATTCCCTACCT

Downstream 100 bases:

>100_bases
GCGGCAATGCCGACCCCAAACAATTGCACGTCAACCTGTTCGAAATGAACTGCGTCAGTCACATCGTGCACGGCATGTGG
GCGCATCCGGACAACAACCG

Product: hypothetical protein

Products: NA

Alternate protein names: DBT sulfur dioxygenase [H]

Number of amino acids: Translated: 434; Mature: 434

Protein sequence:

>434_residues
MELPMNAQAVFPSDTSPQLGAPTDAALAQRFDPVFARIAEGALARERERILAHEPVAWLRAAGFGAVRVPQAHGGLGASL
PQLLRLLARLGEADSNLPQILRAHFGFVEGLYGSTADDAALRARWFPRVAAGALFGAAMAERGPATENTLTLRRDGAHWQ
LDGEKFYSTGTLYADWILAAAVDGGDQLALAVPADAQGVTRIDDWDGFGQRLTGSGSTHFRAVRLQDEHVLHRHPAGQAR
PDNYLTAFYQSVHLATLTGIARAVLRDGVEFVRARTRVFGVPGQTRPADDPLVQRVVGRLSSLAFAADAVVEQVGVSLQQ
AHLAHHAGTASEADYIAADLAAYHGQQVVLPLVLEASTLVFEVGGASATARERALDRHWRNARTIASHNPAILRERALGD
WRLNGRRPREAWFAGTTSQSAAGADASVSTGATA

Sequences:

>Translated_434_residues
MELPMNAQAVFPSDTSPQLGAPTDAALAQRFDPVFARIAEGALARERERILAHEPVAWLRAAGFGAVRVPQAHGGLGASL
PQLLRLLARLGEADSNLPQILRAHFGFVEGLYGSTADDAALRARWFPRVAAGALFGAAMAERGPATENTLTLRRDGAHWQ
LDGEKFYSTGTLYADWILAAAVDGGDQLALAVPADAQGVTRIDDWDGFGQRLTGSGSTHFRAVRLQDEHVLHRHPAGQAR
PDNYLTAFYQSVHLATLTGIARAVLRDGVEFVRARTRVFGVPGQTRPADDPLVQRVVGRLSSLAFAADAVVEQVGVSLQQ
AHLAHHAGTASEADYIAADLAAYHGQQVVLPLVLEASTLVFEVGGASATARERALDRHWRNARTIASHNPAILRERALGD
WRLNGRRPREAWFAGTTSQSAAGADASVSTGATA
>Mature_434_residues
MELPMNAQAVFPSDTSPQLGAPTDAALAQRFDPVFARIAEGALARERERILAHEPVAWLRAAGFGAVRVPQAHGGLGASL
PQLLRLLARLGEADSNLPQILRAHFGFVEGLYGSTADDAALRARWFPRVAAGALFGAAMAERGPATENTLTLRRDGAHWQ
LDGEKFYSTGTLYADWILAAAVDGGDQLALAVPADAQGVTRIDDWDGFGQRLTGSGSTHFRAVRLQDEHVLHRHPAGQAR
PDNYLTAFYQSVHLATLTGIARAVLRDGVEFVRARTRVFGVPGQTRPADDPLVQRVVGRLSSLAFAADAVVEQVGVSLQQ
AHLAHHAGTASEADYIAADLAAYHGQQVVLPLVLEASTLVFEVGGASATARERALDRHWRNARTIASHNPAILRERALGD
WRLNGRRPREAWFAGTTSQSAAGADASVSTGATA

Specific function: Part of a pathway to remove covalently bound sulfur from dibenzothiophene (DBT) without breaking carbon-carbon bonds. Sulfur dioxygenase which converts DBT to DBT-sulfone (DBTO2 or DBT 5,5-dioxide) [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013107
- InterPro:   IPR006092
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF08028 Acyl-CoA_dh_2; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 46374; Mature: 46374

Theoretical pI: Translated: 7.10; Mature: 7.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELPMNAQAVFPSDTSPQLGAPTDAALAQRFDPVFARIAEGALARERERILAHEPVAWLR
CCCCCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
AAGFGAVRVPQAHGGLGASLPQLLRLLARLGEADSNLPQILRAHFGFVEGLYGSTADDAA
HCCCCCEECCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCHHH
LRARWFPRVAAGALFGAAMAERGPATENTLTLRRDGAHWQLDGEKFYSTGTLYADWILAA
HHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCEEEECCHHHCCCCCHHHHHHHHH
AVDGGDQLALAVPADAQGVTRIDDWDGFGQRLTGSGSTHFRAVRLQDEHVLHRHPAGQAR
EECCCCEEEEEECCCCCCCCCCCCCCCCCCEECCCCCCEEEEEEECCCHHHHCCCCCCCC
PDNYLTAFYQSVHLATLTGIARAVLRDGVEFVRARTRVFGVPGQTRPADDPLVQRVVGRL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH
SSLAFAADAVVEQVGVSLQQAHLAHHAGTASEADYIAADLAAYHGQQVVLPLVLEASTLV
HHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCEEEEHHHHHHCEEE
FEVGGASATARERALDRHWRNARTIASHNPAILRERALGDWRLNGRRPREAWFAGTTSQS
EEECCCCHHHHHHHHHHHHHCCCHHCCCCHHHHHHHCCCCCCCCCCCCHHHHCCCCCCCC
AAGADASVSTGATA
CCCCCCCCCCCCCC
>Mature Secondary Structure
MELPMNAQAVFPSDTSPQLGAPTDAALAQRFDPVFARIAEGALARERERILAHEPVAWLR
CCCCCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
AAGFGAVRVPQAHGGLGASLPQLLRLLARLGEADSNLPQILRAHFGFVEGLYGSTADDAA
HCCCCCEECCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCHHH
LRARWFPRVAAGALFGAAMAERGPATENTLTLRRDGAHWQLDGEKFYSTGTLYADWILAA
HHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCEEEECCHHHCCCCCHHHHHHHHH
AVDGGDQLALAVPADAQGVTRIDDWDGFGQRLTGSGSTHFRAVRLQDEHVLHRHPAGQAR
EECCCCEEEEEECCCCCCCCCCCCCCCCCCEECCCCCCEEEEEEECCCHHHHCCCCCCCC
PDNYLTAFYQSVHLATLTGIARAVLRDGVEFVRARTRVFGVPGQTRPADDPLVQRVVGRL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH
SSLAFAADAVVEQVGVSLQQAHLAHHAGTASEADYIAADLAAYHGQQVVLPLVLEASTLV
HHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCEEEEHHHHHHCEEE
FEVGGASATARERALDRHWRNARTIASHNPAILRERALGDWRLNGRRPREAWFAGTTSQS
EEECCCCHHHHHHHHHHHHHCCCHHCCCCHHHHHHHCCCCCCCCCCCCHHHHCCCCCCCC
AAGADASVSTGATA
CCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7961424; 7574582 [H]