Click here to switch to the map view.

The map label for this gene is ssuD

Identifier: 21241620

GI number: 21241620

Start: 1009376

End: 1010539

Strand: Reverse

Name: ssuD

Synonym: XAC0850

Alternate gene names: 21241620

Gene position: 1010539-1009376 (Counterclockwise)

Preceding gene: 21241621

Following gene: 21241619

Centisome position: 19.53

GC content: 65.98

Gene sequence:

>1164_bases
ATGGACATGTTCTGGTTCATCCCCACCCACGGCGATAGCCGCTACCTGGGCACCAGCGATGGCGCGCGCCAGGTCAGCGC
CGAATACGTCACCCAGGTGGCGGTCGCCGCCGATACGCTGGGCTATGAGGGTGTACTGATTCCGACCGGCCGTTCCTGTG
AGGATCCGTGGGTCATCGCATCGAGCCTGATCAATGCGACGCGCCGGCTGAAGTTTCTGGTCGCGCTGCGTCCCGGCCTG
ATGGCGCCCGCGCTGGCCGCGCGCACGGCGGCCAGCTTCGACCGCCTCTCCGGCGGGCGCCTGCTGGTGAACCTGGTCAC
CGGCGGCGACCGCGGCGAACTGGAAGGCGATGGCGTCTTTCTGGACCACGCAGAACGCTATGAAGCATCGGCAGAATTCA
TCCGCATCTGGCGCGAGATCATCGCCCACAGCCACAGCGGCGAGAGCTACGACTTCGACGGCAAACATCTGCAAGTGAAG
GCGGCCAAGCTGTTGTATCCCACCGTGCAGAGGCCGTATCCGCCAGTGTGGTTCGGTGGCTCTTCCGACGCTGCGCACGA
TCTGGCCGCCGAGCAGGTCGATACCTATCTGACCTGGGGCGAACCACCGGATGCGGTTGCGGAAAAGATCGCCTCGGTCC
GCAGCAAGGCCGCGGCGCTGGGGCGCACGCTTACCTTCGGCATCCGCCTGCACGTGATCGTGCGCGAGACCGAGGCAGAA
GCGTGGGCGGCGGCCGAGTCGCTGATCAGTCATCTCGACGACGAAACCGTGGAACGCGCGCAAAGTGCATTTGCGCGCAT
GGATTCGGTCGGCCAGCGACGCATGGCCGCACTGCACAGCCGCGGTCAGCGCCGTACCCGCGCCGATCTGGAAGTCAGCC
CCAACCTGTGGGCTGGCGTCGGCCTGGTGCGTGGTGGTGCCGGCACCGCGCTGGTGGGCGATCCGCAGACCGTGGCCAAG
CGGATCGAAGAATATGCCGCGCTCGGCATCGATACCTTCATCTTCTCGGGCTACCCGCATCTGGAAGAAGCCTACCGTTT
CGCCGAGCTGGTGTTCCCGCTGCTGCCGCGCACGGTCAAGCAAAAACTTCCTGGCCAGGCACTGAGCGGACCCTTCGGCG
AAGTCATCGCCAACACCATCGTGCCGCGCGCTTCGGCGCGCTGA

Upstream 100 bases:

>100_bases
CGCCTGGTCGAAACCGAACACGCTTGCAACGAACTCCCCATTCAATCCCTGCACATGATGTGCGGGCTGCTGCGAGGGAC
GCGCATGACCGAGACCCACC

Downstream 100 bases:

>100_bases
CGGGAGCACTCATGAAGCGTCGCAACCTGCTCAAATTCGGAACCCTCGCCGGCGTCGCGCTCGGCGCCCCGCCGTTGCTG
TCCGGCACCGCCTTCGCGCA

Product: alkanesulfonate monooxygenase

Products: NA

Alternate protein names: FMNH2-dependent aliphatic sulfonate monooxygenase

Number of amino acids: Translated: 387; Mature: 387

Protein sequence:

>387_residues
MDMFWFIPTHGDSRYLGTSDGARQVSAEYVTQVAVAADTLGYEGVLIPTGRSCEDPWVIASSLINATRRLKFLVALRPGL
MAPALAARTAASFDRLSGGRLLVNLVTGGDRGELEGDGVFLDHAERYEASAEFIRIWREIIAHSHSGESYDFDGKHLQVK
AAKLLYPTVQRPYPPVWFGGSSDAAHDLAAEQVDTYLTWGEPPDAVAEKIASVRSKAAALGRTLTFGIRLHVIVRETEAE
AWAAAESLISHLDDETVERAQSAFARMDSVGQRRMAALHSRGQRRTRADLEVSPNLWAGVGLVRGGAGTALVGDPQTVAK
RIEEYAALGIDTFIFSGYPHLEEAYRFAELVFPLLPRTVKQKLPGQALSGPFGEVIANTIVPRASAR

Sequences:

>Translated_387_residues
MDMFWFIPTHGDSRYLGTSDGARQVSAEYVTQVAVAADTLGYEGVLIPTGRSCEDPWVIASSLINATRRLKFLVALRPGL
MAPALAARTAASFDRLSGGRLLVNLVTGGDRGELEGDGVFLDHAERYEASAEFIRIWREIIAHSHSGESYDFDGKHLQVK
AAKLLYPTVQRPYPPVWFGGSSDAAHDLAAEQVDTYLTWGEPPDAVAEKIASVRSKAAALGRTLTFGIRLHVIVRETEAE
AWAAAESLISHLDDETVERAQSAFARMDSVGQRRMAALHSRGQRRTRADLEVSPNLWAGVGLVRGGAGTALVGDPQTVAK
RIEEYAALGIDTFIFSGYPHLEEAYRFAELVFPLLPRTVKQKLPGQALSGPFGEVIANTIVPRASAR
>Mature_387_residues
MDMFWFIPTHGDSRYLGTSDGARQVSAEYVTQVAVAADTLGYEGVLIPTGRSCEDPWVIASSLINATRRLKFLVALRPGL
MAPALAARTAASFDRLSGGRLLVNLVTGGDRGELEGDGVFLDHAERYEASAEFIRIWREIIAHSHSGESYDFDGKHLQVK
AAKLLYPTVQRPYPPVWFGGSSDAAHDLAAEQVDTYLTWGEPPDAVAEKIASVRSKAAALGRTLTFGIRLHVIVRETEAE
AWAAAESLISHLDDETVERAQSAFARMDSVGQRRMAALHSRGQRRTRADLEVSPNLWAGVGLVRGGAGTALVGDPQTVAK
RIEEYAALGIDTFIFSGYPHLEEAYRFAELVFPLLPRTVKQKLPGQALSGPFGEVIANTIVPRASAR

Specific function: Catalyzes the desulfonation of aliphatic sulfonates

COG id: COG2141

COG function: function code C; Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the SsuD family

Homologues:

Organism=Escherichia coli, GI1787166, Length=387, Percent_Identity=65.374677002584, Blast_Score=515, Evalue=1e-147,
Organism=Escherichia coli, GI1787247, Length=312, Percent_Identity=25.6410256410256, Blast_Score=69, Evalue=4e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): SSUD_XANAC (Q8PP38)

Other databases:

- EMBL:   AE008923
- RefSeq:   NP_641202.1
- ProteinModelPortal:   Q8PP38
- SMR:   Q8PP38
- GeneID:   1154921
- GenomeReviews:   AE008923_GR
- KEGG:   xac:XAC0850
- NMPDR:   fig|190486.1.peg.846
- HOGENOM:   HBG639644
- OMA:   REVRFGI
- ProtClustDB:   PRK00719
- BioCyc:   XAXO190486:XAC0850-MONOMER
- BRENDA:   1.14.14.5
- HAMAP:   MF_01229
- InterPro:   IPR019911
- InterPro:   IPR011251
- InterPro:   IPR016048
- Gene3D:   G3DSA:3.20.20.30
- TIGRFAMs:   TIGR03565

Pfam domain/function: PF00296 Bac_luciferase; SSF51679 Luciferase_like

EC number: =1.14.14.5

Molecular weight: Translated: 42084; Mature: 42084

Theoretical pI: Translated: 6.36; Mature: 6.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDMFWFIPTHGDSRYLGTSDGARQVSAEYVTQVAVAADTLGYEGVLIPTGRSCEDPWVIA
CCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHH
SSLINATRRLKFLVALRPGLMAPALAARTAASFDRLSGGRLLVNLVTGGDRGELEGDGVF
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCEE
LDHAERYEASAEFIRIWREIIAHSHSGESYDFDGKHLQVKAAKLLYPTVQRPYPPVWFGG
ECCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEHHHHHHHHHCCCCCCEEECC
SSDAAHDLAAEQVDTYLTWGEPPDAVAEKIASVRSKAAALGRTLTFGIRLHVIVRETEAE
CCCHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEEEECCHH
AWAAAESLISHLDDETVERAQSAFARMDSVGQRRMAALHSRGQRRTRADLEVSPNLWAGV
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCEECCCHHHCC
GLVRGGAGTALVGDPQTVAKRIEEYAALGIDTFIFSGYPHLEEAYRFAELVFPLLPRTVK
CEEECCCCCEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHH
QKLPGQALSGPFGEVIANTIVPRASAR
HHCCCCCCCCCHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MDMFWFIPTHGDSRYLGTSDGARQVSAEYVTQVAVAADTLGYEGVLIPTGRSCEDPWVIA
CCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHH
SSLINATRRLKFLVALRPGLMAPALAARTAASFDRLSGGRLLVNLVTGGDRGELEGDGVF
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCEE
LDHAERYEASAEFIRIWREIIAHSHSGESYDFDGKHLQVKAAKLLYPTVQRPYPPVWFGG
ECCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEHHHHHHHHHCCCCCCEEECC
SSDAAHDLAAEQVDTYLTWGEPPDAVAEKIASVRSKAAALGRTLTFGIRLHVIVRETEAE
CCCHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEEEECCHH
AWAAAESLISHLDDETVERAQSAFARMDSVGQRRMAALHSRGQRRTRADLEVSPNLWAGV
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCEECCCHHHCC
GLVRGGAGTALVGDPQTVAKRIEEYAALGIDTFIFSGYPHLEEAYRFAELVFPLLPRTVK
CEEECCCCCEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHH
QKLPGQALSGPFGEVIANTIVPRASAR
HHCCCCCCCCCHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12024217