| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is yuxL [H]
Identifier: 21241575
GI number: 21241575
Start: 955694
End: 958228
Strand: Direct
Name: yuxL [H]
Synonym: XAC0805
Alternate gene names: 21241575
Gene position: 955694-958228 (Clockwise)
Preceding gene: 21241573
Following gene: 21241576
Centisome position: 18.47
GC content: 67.89
Gene sequence:
>2535_bases ATGCGGGCGAAACGGCATGCGCAAGGCTGGCGGCAGCACACATGGGCGTTGGCAGGGGCGCTGGCATTGAGCGCACCGAT GATGGCCGGGGCGGCTAGCCCGGCAGTGACCAAGGTGGCAGTCGTGCAACCAGGCCCTGCGTCAGGCAGCGGTTATCAAC TTCCCTCCAAGGCGCTGCAGGCGGTGGTGGACGCCCCGCGCGCGCCGCTGCTGCAGCTCTCGCCCAGGCGCGATCTGGCC GCGATGCTGCAACTGCCGGCACTGCCGGACATCGCCGAGGTGGCCCAGCCGGAGCTGAAGCTGGCCGGCCTGCGCATCCA TCCGAAGACCTTCGCGGCCAGCCGCTTTTCGTTCGCCAGCAAGCTGTGGCTGCTGTCGGTGGCCGACGGCAGCGAGCGGC AGATCGCCGGGTTGCCCTCGCCGTTGTCGCTGGCCGATTTGAGCTGGTCGCCCGACCAACGCCATCTGGCGTTCCGCCGC GAAGACGCCGCCAGCGGCGCCAACGAACTGTGGCTGGTAGACGTGGCGACCGGGCAGGCGCGGCGTCTGGTGGCCGGCTT GAACACCAGCGTCAACGACGACTTGCGTTGGTTGCCCGATGGCAGCGGTTTGCTGCTGCAGCAGCAGGTCGCCGGGCAGG GCGCGCCACCGACCCGCGATGCGACGCCGACCGGCCCGGCTACCCAGCAGACCAGTGCGGCCGCCGGGGTGCGCTCGCTG CCCACCTACCAGGACCTGCTGCGCAGCGAGGCCGATGCGCGCGTGTTCGAGTACTACGCCACCGGTCAGCCGATCATCGT CACGGTGGCCGGGCAGGTACGTCCGATCGCCACGCCGGGCATCTATCTCAACCTGTCGGTGTCGCCGGATGGCCGTTACA TCCTGAGCGAACGCAGCGAGCGGCCGTTCTCGTATCTGGTGCCGGTAGACAACTTCGCGCGCCGCATCGAGGTGCTGGAC CTGCAGGGCAAACTGGTGCGCCAGATCGCGCAGCTGCCGTTGGTGGAAGGCTTGCCGACCGGTAACGACGCGGTGCCGAC CGGGGTGCGCGACATCGCCTGGCGGCACGATGCGCCGGCCACGCTGGTGTGGGCCGAAGCGCAGGACGGTGGCGACCCGG CACGCGAGAGCAAGGTCCGCGATGCGGTGCGGATGCAGGCCGCGCCGTTCAACCGCGCACCGGTGACGCTGGCGCAGTTG GGCAGCCGGTTCGAAGGCATCCAGTGGGGCCGCGGCGATCTGGCGATCTTGAGCGAAAGCTGGTGGAAGACCCGCCGCAC CAAGCAATGGCGCATCGCACCGGATCAACCGCAACGCGCGCCCGAACTGCTGTGGGACCGCTCCTCGCAGGACCGCTACA AGGACCCGGGCACGCCGGCGACGGTGGCCGACGGCAACGGCCGCCCGCTGCTGCAGACCAGCAGCGATGGCAACAGCCTG TTCCTGTTCGGCAAGGGCGCTTCGCCGGAAGGCGACCGCCCGTTCGTGGATCGATTCGATCTGCGCAGCAAGCAGGCCAC GCGGCTGTTCCACTCGCAGGCGCCGACCTATTCGGCACCGCTGGCCTTGTTGGACGCGCAGGCCACGCAACTGCTGCTCA GCCGCGAATCGCCGGAGGAACCGGCCAACTATGTCGTGCAACCGCTGGGCGATGGCGCCGCCGCCGCGCGCGCGTTGACG CACTTCGCACACCCGCTGCCGCAATTGCGCGGCGTGCAGAAGGAGCAGATCCGCTACAAGCGTGCCGACGGCGTGGAACT CACCGCCACACTCTTGCTGCCACCTGGTTACGACCCCAAGCGCGATGGCCCACGGCCGTTGCTGATGTGGGCCTACCCGG GCGAATTCAAAAGCGCCGACACCGCCAGCCAGGTCACCGACTCGCCGTACCGTTTCAACGCGATCAGTTACTGGGGGCCG CAGGCGTTTCTGGCGATCGGCTATGTGGTGCTCAACAACCCGAGCACGCCGATCGTGGGCGAAGGCGATGCAGAACCCAA CGACACCTATGTGCCGCAGCTGATCGCCGATGCGCAGGCGGCCGTGGACGAAGTGGTGCGGCGCGGCGTCACCGACCGCG AGCACATCGCCATCGGCGGGCATTCCTACGGTGCCTTCATGACCGCCAACCTGCTCGCGCACACGCGCCTGTTCAAGGCC GGCATCGCACGCAGCGGCGCCTACAACCGCACGCTCACCCCGTTCGGTTTCCAGGCCGAAGAGCGCAATTACTGGCAGGC GCAATCGGTGTACCAGGCGATGTCGCCATTCAATTACGCCGACAAGATCAAGGATCCGCTGCTGCTGATCCACGGCCAGG ACGACAACAATACCGGCACCTTCCCGATCCAGAGCGAGCGCATGTTCGCTGCGATCAAGGGACTGGGCGGGACTGCGCGC CTGGTCCTGTTGCCCAACGAATCGCATGCGTACCGCGCGCGGCAATCGATCATGCAGATGCTGGCCGAAAGCGAGCAGTG GTTGAAGACCAATGTCGGCGATCCCGCGCAGGCGGAAGTGCCGTCCAAGCGTTGA
Upstream 100 bases:
>100_bases CCCGTGCGGCATGAATTGCGGCCGACCCCCTACCAACGGCAGGGGAGCGGCCGACAGGCGGCTGCTATGGTCCGGAGTCG ATCATCAGCGGGGACGGACA
Downstream 100 bases:
>100_bases TCGTCGTCGCACGCAATGCGGTGCGAACGCAACGCGGATCGTCGCACCTACGCATTGCTTGCCGGTGCCGGGTGACGGAT TCCAATGGCGCGCACGAACG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 844; Mature: 844
Protein sequence:
>844_residues MRAKRHAQGWRQHTWALAGALALSAPMMAGAASPAVTKVAVVQPGPASGSGYQLPSKALQAVVDAPRAPLLQLSPRRDLA AMLQLPALPDIAEVAQPELKLAGLRIHPKTFAASRFSFASKLWLLSVADGSERQIAGLPSPLSLADLSWSPDQRHLAFRR EDAASGANELWLVDVATGQARRLVAGLNTSVNDDLRWLPDGSGLLLQQQVAGQGAPPTRDATPTGPATQQTSAAAGVRSL PTYQDLLRSEADARVFEYYATGQPIIVTVAGQVRPIATPGIYLNLSVSPDGRYILSERSERPFSYLVPVDNFARRIEVLD LQGKLVRQIAQLPLVEGLPTGNDAVPTGVRDIAWRHDAPATLVWAEAQDGGDPARESKVRDAVRMQAAPFNRAPVTLAQL GSRFEGIQWGRGDLAILSESWWKTRRTKQWRIAPDQPQRAPELLWDRSSQDRYKDPGTPATVADGNGRPLLQTSSDGNSL FLFGKGASPEGDRPFVDRFDLRSKQATRLFHSQAPTYSAPLALLDAQATQLLLSRESPEEPANYVVQPLGDGAAAARALT HFAHPLPQLRGVQKEQIRYKRADGVELTATLLLPPGYDPKRDGPRPLLMWAYPGEFKSADTASQVTDSPYRFNAISYWGP QAFLAIGYVVLNNPSTPIVGEGDAEPNDTYVPQLIADAQAAVDEVVRRGVTDREHIAIGGHSYGAFMTANLLAHTRLFKA GIARSGAYNRTLTPFGFQAEERNYWQAQSVYQAMSPFNYADKIKDPLLLIHGQDDNNTGTFPIQSERMFAAIKGLGGTAR LVLLPNESHAYRARQSIMQMLAESEQWLKTNVGDPAQAEVPSKR
Sequences:
>Translated_844_residues MRAKRHAQGWRQHTWALAGALALSAPMMAGAASPAVTKVAVVQPGPASGSGYQLPSKALQAVVDAPRAPLLQLSPRRDLA AMLQLPALPDIAEVAQPELKLAGLRIHPKTFAASRFSFASKLWLLSVADGSERQIAGLPSPLSLADLSWSPDQRHLAFRR EDAASGANELWLVDVATGQARRLVAGLNTSVNDDLRWLPDGSGLLLQQQVAGQGAPPTRDATPTGPATQQTSAAAGVRSL PTYQDLLRSEADARVFEYYATGQPIIVTVAGQVRPIATPGIYLNLSVSPDGRYILSERSERPFSYLVPVDNFARRIEVLD LQGKLVRQIAQLPLVEGLPTGNDAVPTGVRDIAWRHDAPATLVWAEAQDGGDPARESKVRDAVRMQAAPFNRAPVTLAQL GSRFEGIQWGRGDLAILSESWWKTRRTKQWRIAPDQPQRAPELLWDRSSQDRYKDPGTPATVADGNGRPLLQTSSDGNSL FLFGKGASPEGDRPFVDRFDLRSKQATRLFHSQAPTYSAPLALLDAQATQLLLSRESPEEPANYVVQPLGDGAAAARALT HFAHPLPQLRGVQKEQIRYKRADGVELTATLLLPPGYDPKRDGPRPLLMWAYPGEFKSADTASQVTDSPYRFNAISYWGP QAFLAIGYVVLNNPSTPIVGEGDAEPNDTYVPQLIADAQAAVDEVVRRGVTDREHIAIGGHSYGAFMTANLLAHTRLFKA GIARSGAYNRTLTPFGFQAEERNYWQAQSVYQAMSPFNYADKIKDPLLLIHGQDDNNTGTFPIQSERMFAAIKGLGGTAR LVLLPNESHAYRARQSIMQMLAESEQWLKTNVGDPAQAEVPSKR >Mature_844_residues MRAKRHAQGWRQHTWALAGALALSAPMMAGAASPAVTKVAVVQPGPASGSGYQLPSKALQAVVDAPRAPLLQLSPRRDLA AMLQLPALPDIAEVAQPELKLAGLRIHPKTFAASRFSFASKLWLLSVADGSERQIAGLPSPLSLADLSWSPDQRHLAFRR EDAASGANELWLVDVATGQARRLVAGLNTSVNDDLRWLPDGSGLLLQQQVAGQGAPPTRDATPTGPATQQTSAAAGVRSL PTYQDLLRSEADARVFEYYATGQPIIVTVAGQVRPIATPGIYLNLSVSPDGRYILSERSERPFSYLVPVDNFARRIEVLD LQGKLVRQIAQLPLVEGLPTGNDAVPTGVRDIAWRHDAPATLVWAEAQDGGDPARESKVRDAVRMQAAPFNRAPVTLAQL GSRFEGIQWGRGDLAILSESWWKTRRTKQWRIAPDQPQRAPELLWDRSSQDRYKDPGTPATVADGNGRPLLQTSSDGNSL FLFGKGASPEGDRPFVDRFDLRSKQATRLFHSQAPTYSAPLALLDAQATQLLLSRESPEEPANYVVQPLGDGAAAARALT HFAHPLPQLRGVQKEQIRYKRADGVELTATLLLPPGYDPKRDGPRPLLMWAYPGEFKSADTASQVTDSPYRFNAISYWGP QAFLAIGYVVLNNPSTPIVGEGDAEPNDTYVPQLIADAQAAVDEVVRRGVTDREHIAIGGHSYGAFMTANLLAHTRLFKA GIARSGAYNRTLTPFGFQAEERNYWQAQSVYQAMSPFNYADKIKDPLLLIHGQDDNNTGTFPIQSERMFAAIKGLGGTAR LVLLPNESHAYRARQSIMQMLAESEQWLKTNVGDPAQAEVPSKR
Specific function: Unknown
COG id: COG1506
COG function: function code E; Dipeptidyl aminopeptidases/acylaminoacyl-peptidases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase S9B family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011042 - InterPro: IPR011659 - InterPro: IPR001375 [H]
Pfam domain/function: PF07676 PD40; PF00326 Peptidase_S9 [H]
EC number: NA
Molecular weight: Translated: 91880; Mature: 91880
Theoretical pI: Translated: 9.21; Mature: 9.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRAKRHAQGWRQHTWALAGALALSAPMMAGAASPAVTKVAVVQPGPASGSGYQLPSKALQ CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCHHHHH AVVDAPRAPLLQLSPRRDLAAMLQLPALPDIAEVAQPELKLAGLRIHPKTFAASRFSFAS HHHCCCCCCCEEECCCHHHHHHHHCCCCCCHHHHCCCCEEEEEEEECCHHHHHHHHHHHC KLWLLSVADGSERQIAGLPSPLSLADLSWSPDQRHLAFRREDAASGANELWLVDVATGQA EEEEEEECCCCCCEECCCCCCCCEECCCCCCCHHHHHEECHHHCCCCCCEEEEEECCCCH RRLVAGLNTSVNDDLRWLPDGSGLLLQQQVAGQGAPPTRDATPTGPATQQTSAAAGVRSL HHHHHHCCCCCCCCCEECCCCCCCEEEHHHCCCCCCCCCCCCCCCCCCCCHHHHHCHHCC PTYQDLLRSEADARVFEYYATGQPIIVTVAGQVRPIATPGIYLNLSVSPDGRYILSERSE CHHHHHHHCCCCCEEEEEEECCCCEEEEECCCEEEEECCCEEEEEEECCCCCEEECCCCC RPFSYLVPVDNFARRIEVLDLQGKLVRQIAQLPLVEGLPTGNDAVPTGVRDIAWRHDAPA CCEEEECCHHHHHHEEEEEECCHHHHHHHHHCCHHCCCCCCCCCCCCCHHHHHCCCCCCC TLVWAEAQDGGDPARESKVRDAVRMQAAPFNRAPVTLAQLGSRFEGIQWGRGDLAILSES EEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCCCCCCCEEEECHH WWKTRRTKQWRIAPDQPQRAPELLWDRSSQDRYKDPGTPATVADGNGRPLLQTSSDGNSL HHHHHCCCEEEECCCCCCCCHHHHHCCCCCCCCCCCCCCCEEECCCCCEEEEECCCCCEE FLFGKGASPEGDRPFVDRFDLRSKQATRLFHSQAPTYSAPLALLDAQATQLLLSRESPEE EEEECCCCCCCCCCCHHHHHCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCC PANYVVQPLGDGAAAARALTHFAHPLPQLRGVQKEQIRYKRADGVELTATLLLPPGYDPK CHHHHEECCCCHHHHHHHHHHHHCCCHHHHCCCHHHHHHHCCCCCEEEEEEEECCCCCCC RDGPRPLLMWAYPGEFKSADTASQVTDSPYRFNAISYWGPQAFLAIGYVVLNNPSTPIVG CCCCCCEEEEECCCCCCCCCCHHHHCCCCEEEEEEEECCCHHHHHEEEEEECCCCCCEEE EGDAEPNDTYVPQLIADAQAAVDEVVRRGVTDREHIAIGGHSYGAFMTANLLAHTRLFKA CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHH GIARSGAYNRTLTPFGFQAEERNYWQAQSVYQAMSPFNYADKIKDPLLLIHGQDDNNTGT HHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHCCCCEEEEECCCCCCCCC FPIQSERMFAAIKGLGGTARLVLLPNESHAYRARQSIMQMLAESEQWLKTNVGDPAQAEV CEECCCHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCC PSKR CCCC >Mature Secondary Structure MRAKRHAQGWRQHTWALAGALALSAPMMAGAASPAVTKVAVVQPGPASGSGYQLPSKALQ CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCHHHHH AVVDAPRAPLLQLSPRRDLAAMLQLPALPDIAEVAQPELKLAGLRIHPKTFAASRFSFAS HHHCCCCCCCEEECCCHHHHHHHHCCCCCCHHHHCCCCEEEEEEEECCHHHHHHHHHHHC KLWLLSVADGSERQIAGLPSPLSLADLSWSPDQRHLAFRREDAASGANELWLVDVATGQA EEEEEEECCCCCCEECCCCCCCCEECCCCCCCHHHHHEECHHHCCCCCCEEEEEECCCCH RRLVAGLNTSVNDDLRWLPDGSGLLLQQQVAGQGAPPTRDATPTGPATQQTSAAAGVRSL HHHHHHCCCCCCCCCEECCCCCCCEEEHHHCCCCCCCCCCCCCCCCCCCCHHHHHCHHCC PTYQDLLRSEADARVFEYYATGQPIIVTVAGQVRPIATPGIYLNLSVSPDGRYILSERSE CHHHHHHHCCCCCEEEEEEECCCCEEEEECCCEEEEECCCEEEEEEECCCCCEEECCCCC RPFSYLVPVDNFARRIEVLDLQGKLVRQIAQLPLVEGLPTGNDAVPTGVRDIAWRHDAPA CCEEEECCHHHHHHEEEEEECCHHHHHHHHHCCHHCCCCCCCCCCCCCHHHHHCCCCCCC TLVWAEAQDGGDPARESKVRDAVRMQAAPFNRAPVTLAQLGSRFEGIQWGRGDLAILSES EEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCCCCCCCEEEECHH WWKTRRTKQWRIAPDQPQRAPELLWDRSSQDRYKDPGTPATVADGNGRPLLQTSSDGNSL HHHHHCCCEEEECCCCCCCCHHHHHCCCCCCCCCCCCCCCEEECCCCCEEEEECCCCCEE FLFGKGASPEGDRPFVDRFDLRSKQATRLFHSQAPTYSAPLALLDAQATQLLLSRESPEE EEEECCCCCCCCCCCHHHHHCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCC PANYVVQPLGDGAAAARALTHFAHPLPQLRGVQKEQIRYKRADGVELTATLLLPPGYDPK CHHHHEECCCCHHHHHHHHHHHHCCCHHHHCCCHHHHHHHCCCCCEEEEEEEECCCCCCC RDGPRPLLMWAYPGEFKSADTASQVTDSPYRFNAISYWGPQAFLAIGYVVLNNPSTPIVG CCCCCCEEEEECCCCCCCCCCHHHHCCCCEEEEEEEECCCHHHHHEEEEEECCCCCCEEE EGDAEPNDTYVPQLIADAQAAVDEVVRRGVTDREHIAIGGHSYGAFMTANLLAHTRLFKA CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHH GIARSGAYNRTLTPFGFQAEERNYWQAQSVYQAMSPFNYADKIKDPLLLIHGQDDNNTGT HHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHCCCCEEEEECCCCCCCCC FPIQSERMFAAIKGLGGTARLVLLPNESHAYRARQSIMQMLAESEQWLKTNVGDPAQAEV CEECCCHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCC PSKR CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9384377; 3098560 [H]