| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21241540
Identifier: 21241540
GI number: 21241540
Start: 913638
End: 914405
Strand: Reverse
Name: 21241540
Synonym: XAC0770
Alternate gene names: NA
Gene position: 914405-913638 (Counterclockwise)
Preceding gene: 21241556
Following gene: 21241539
Centisome position: 17.67
GC content: 69.53
Gene sequence:
>768_bases ATGTGTCTGGTCGCTCTCGCCTGGAAAGTCCACCCGCGCTGGCGTTTGCTGCTGGCGGGCAACCGCGACGAATTCCACGA ACGTCCCACTGCGGCACTGGCACGCTGGGCGGCGCCGGCCGACAACCTGCTGGCTGGCCGCGACCTGCGCTCCGGTGGCA GTTGGGTTGGCCTGGATCGGGACGGACGCGCTGCGGTGGTCACCAATGTGCGTGACCCGCTCGCCACTTCTTCGGGGCGC TCGCGCGGGCATTTGATTGCCGACTACCTGTCCGGCAGCCTGGGCGCTACCGTGTACGCCGACGCACTGGCCGGCGCCGC CCACGCGTTCCCACCTTTCAACCTGTTGCTGTGCGACGCCGACCGGTGTGAGCACCTGAGCAACCACCCGCCACTGGCGC GGCAACTGGCGGCGGGCATCCATGGCATGTCCAACGGGCCGCTGGATGCGCCGTGGCCCAAGACCGCTGCGCTGACCAAG GTGCTGCACCGCTGGTGCGCCGACGGCGACGAAGACCTGCAGCCGCTGTGGGCCGCCCTGGGCAACCCGGCCATCGCCCC CGACGCTGCGCTACCGCAGACCGGCGTGGACCTGGCGACCGAACGCCTGCTCTCGGCCGCCTTCATCAGCGGCCCCAGCT ATGGCACCCGCGCCAGCACCATCGTTGCGGTGGACCATCACGGCCATGGCTTCATCCACGAACGACGCTTCGGGCCGAAT GGGATTTTCCAGGGCGAGGCACGCCTGGAGATCCCTGGCTCGCGTTGA
Upstream 100 bases:
>100_bases AATTCAGGGCGGTGAAGGCCATGTAAACCCGACTGCCATCTCACTTCACATTGCGTCAGCGACGTATCTCAACTGCGCAA ACAAGGTGACAATCGGCGAC
Downstream 100 bases:
>100_bases CAAGCCACGCTCGTGCGCATAGCCGAGGAGTCGACGCATGAACCGCCATTACGATGTTTCTGCGCAAAAAAACCATCGAA TCTGACCGCCATGCCGACCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 255; Mature: 255
Protein sequence:
>255_residues MCLVALAWKVHPRWRLLLAGNRDEFHERPTAALARWAAPADNLLAGRDLRSGGSWVGLDRDGRAAVVTNVRDPLATSSGR SRGHLIADYLSGSLGATVYADALAGAAHAFPPFNLLLCDADRCEHLSNHPPLARQLAAGIHGMSNGPLDAPWPKTAALTK VLHRWCADGDEDLQPLWAALGNPAIAPDAALPQTGVDLATERLLSAAFISGPSYGTRASTIVAVDHHGHGFIHERRFGPN GIFQGEARLEIPGSR
Sequences:
>Translated_255_residues MCLVALAWKVHPRWRLLLAGNRDEFHERPTAALARWAAPADNLLAGRDLRSGGSWVGLDRDGRAAVVTNVRDPLATSSGR SRGHLIADYLSGSLGATVYADALAGAAHAFPPFNLLLCDADRCEHLSNHPPLARQLAAGIHGMSNGPLDAPWPKTAALTK VLHRWCADGDEDLQPLWAALGNPAIAPDAALPQTGVDLATERLLSAAFISGPSYGTRASTIVAVDHHGHGFIHERRFGPN GIFQGEARLEIPGSR >Mature_255_residues MCLVALAWKVHPRWRLLLAGNRDEFHERPTAALARWAAPADNLLAGRDLRSGGSWVGLDRDGRAAVVTNVRDPLATSSGR SRGHLIADYLSGSLGATVYADALAGAAHAFPPFNLLLCDADRCEHLSNHPPLARQLAAGIHGMSNGPLDAPWPKTAALTK VLHRWCADGDEDLQPLWAALGNPAIAPDAALPQTGVDLATERLLSAAFISGPSYGTRASTIVAVDHHGHGFIHERRFGPN GIFQGEARLEIPGSR
Specific function: Unknown
COG id: COG3332
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI190570176, Length=271, Percent_Identity=29.520295202952, Blast_Score=105, Evalue=3e-23, Organism=Caenorhabditis elegans, GI17566294, Length=264, Percent_Identity=25.3787878787879, Blast_Score=91, Evalue=7e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27177; Mature: 27177
Theoretical pI: Translated: 7.40; Mature: 7.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCLVALAWKVHPRWRLLLAGNRDEFHERPTAALARWAAPADNLLAGRDLRSGGSWVGLDR CEEEEEEEEECCCEEEEEECCHHHHHHCHHHHHHHHCCCCCHHHCCCCCCCCCCEEEECC DGRAAVVTNVRDPLATSSGRSRGHLIADYLSGSLGATVYADALAGAAHAFPPFNLLLCDA CCCEEEEECCCCCCCCCCCCCCCCEEHHHHCCCCCHHHHHHHHHHHHHCCCCCEEEEECC DRCEHLSNHPPLARQLAAGIHGMSNGPLDAPWPKTAALTKVLHRWCADGDEDLQPLWAAL HHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHH GNPAIAPDAALPQTGVDLATERLLSAAFISGPSYGTRASTIVAVDHHGHGFIHERRFGPN CCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCEEECCCCCC GIFQGEARLEIPGSR CEECCCEEEECCCCC >Mature Secondary Structure MCLVALAWKVHPRWRLLLAGNRDEFHERPTAALARWAAPADNLLAGRDLRSGGSWVGLDR CEEEEEEEEECCCEEEEEECCHHHHHHCHHHHHHHHCCCCCHHHCCCCCCCCCCEEEECC DGRAAVVTNVRDPLATSSGRSRGHLIADYLSGSLGATVYADALAGAAHAFPPFNLLLCDA CCCEEEEECCCCCCCCCCCCCCCCEEHHHHCCCCCHHHHHHHHHHHHHCCCCCEEEEECC DRCEHLSNHPPLARQLAAGIHGMSNGPLDAPWPKTAALTKVLHRWCADGDEDLQPLWAAL HHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHH GNPAIAPDAALPQTGVDLATERLLSAAFISGPSYGTRASTIVAVDHHGHGFIHERRFGPN CCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCEEECCCCCC GIFQGEARLEIPGSR CEECCCEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA