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The map label for this gene is ybcI [H]

Identifier: 21241534

GI number: 21241534

Start: 908287

End: 908826

Strand: Reverse

Name: ybcI [H]

Synonym: XAC0763

Alternate gene names: 21241534

Gene position: 908826-908287 (Counterclockwise)

Preceding gene: 21241535

Following gene: 21241533

Centisome position: 17.56

GC content: 68.15

Gene sequence:

>540_bases
ATGCCAACCATCATGACCCACGCTGCCGTGCCATTGGCGCTGTGGTGCGCCAGCGAATGCGGCCGCATCTCGCCACGCCT
GCTCGCGGCCGGCGTGGTGGCGGCGATGCTGCCCGATGCCGATGTGCTGGCGTTCGCGCTGCGCATTCCCTACGCCGATG
CGTTCGGCCATCGCGGCGCCAGCCACTCGCTGTTGTTCGCCAGCGTCATCGCACTGCTCGGCATCGCGGCGCATCGCAGC
CTGCGTGCGGATGCCGTGCAGGCGTCTGTATTTTTGTTCGCCTGCGCCGCATCGCACCCGCTGCTGGATGCGATGACCTC
CGGCGGCCTGGGCGTTGCGCTGGGCTGGCCGTGGAGCCAGACGCGTTGGTTCGCACCATGGCGGCCGATTCGGGTGTCAC
CATTCGCGACCGGCTTCTTCAACGCGCGCGGCCTGAGCACGTTGCTCTCCGAGCTGCGCTGGGTCTGGTTGCCGCTCACC
GTCGCCGTGCTGGGGTGGAAATGCATCCAGCGCGCGGCACCACAGGATCGCATGTCATGA

Upstream 100 bases:

>100_bases
TCGATGCCAGCGGCGAACCGCCGGTATTGCACTGGATCCGCGACGCATTCCGCGCCGACGATTGCTGACCGCCACCGAAC
GCTCACGCCAACGTTTTTTC

Downstream 100 bases:

>100_bases
CCGATGTACTTCCCACCGCACTTGCCGAGTTGTTGGCCGCGCGCCTGGGTACCGATGGATGGTTGACCGGCGACGATGCG
CGCCGCCGCTATGGCGAAGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 179; Mature: 178

Protein sequence:

>179_residues
MPTIMTHAAVPLALWCASECGRISPRLLAAGVVAAMLPDADVLAFALRIPYADAFGHRGASHSLLFASVIALLGIAAHRS
LRADAVQASVFLFACAASHPLLDAMTSGGLGVALGWPWSQTRWFAPWRPIRVSPFATGFFNARGLSTLLSELRWVWLPLT
VAVLGWKCIQRAAPQDRMS

Sequences:

>Translated_179_residues
MPTIMTHAAVPLALWCASECGRISPRLLAAGVVAAMLPDADVLAFALRIPYADAFGHRGASHSLLFASVIALLGIAAHRS
LRADAVQASVFLFACAASHPLLDAMTSGGLGVALGWPWSQTRWFAPWRPIRVSPFATGFFNARGLSTLLSELRWVWLPLT
VAVLGWKCIQRAAPQDRMS
>Mature_178_residues
PTIMTHAAVPLALWCASECGRISPRLLAAGVVAAMLPDADVLAFALRIPYADAFGHRGASHSLLFASVIALLGIAAHRSL
RADAVQASVFLFACAASHPLLDAMTSGGLGVALGWPWSQTRWFAPWRPIRVSPFATGFFNARGLSTLLSELRWVWLPLTV
AVLGWKCIQRAAPQDRMS

Specific function: Unknown

COG id: COG1988

COG function: function code R; Predicted membrane-bound metal-dependent hydrolases

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786738, Length=171, Percent_Identity=47.953216374269, Blast_Score=137, Evalue=4e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007404 [H]

Pfam domain/function: PF04307 DUF457 [H]

EC number: NA

Molecular weight: Translated: 19233; Mature: 19102

Theoretical pI: Translated: 10.41; Mature: 10.41

Prosite motif: PS00290 IG_MHC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTIMTHAAVPLALWCASECGRISPRLLAAGVVAAMLPDADVLAFALRIPYADAFGHRGA
CCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHCCCCC
SHSLLFASVIALLGIAAHRSLRADAVQASVFLFACAASHPLLDAMTSGGLGVALGWPWSQ
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCEEEECCCCCC
TRWFAPWRPIRVSPFATGFFNARGLSTLLSELRWVWLPLTVAVLGWKCIQRAAPQDRMS
CEEECCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
PTIMTHAAVPLALWCASECGRISPRLLAAGVVAAMLPDADVLAFALRIPYADAFGHRGA
CCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHCCCCC
SHSLLFASVIALLGIAAHRSLRADAVQASVFLFACAASHPLLDAMTSGGLGVALGWPWSQ
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCEEEECCCCCC
TRWFAPWRPIRVSPFATGFFNARGLSTLLSELRWVWLPLTVAVLGWKCIQRAAPQDRMS
CEEECCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503; 7567469 [H]