| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is frmB [H]
Identifier: 21241507
GI number: 21241507
Start: 875951
End: 876781
Strand: Direct
Name: frmB [H]
Synonym: XAC0736
Alternate gene names: 21241507
Gene position: 875951-876781 (Clockwise)
Preceding gene: 21241506
Following gene: 21241509
Centisome position: 16.92
GC content: 62.33
Gene sequence:
>831_bases ATGGAACGTATCGAACACCGCGCCTGCTTCGGCGGCTGGCAGGATGTCTATCGGCATCAGTCGCACACCTTGAACTGCAG CATGCAGGTGGGCGTTTACCTGCCGCCGCAAGCCGCGGACGGCCCGTTGCCGGTGCTGTACTGGTTGAGCGGTTTGACCT GCACCGAACAGAATTTCATCAGCAAGGCCGGCGCGCAGCGCTATGCGGCCGAACATGGCGTGATCCTAATTGCGCCCGAC ACCAGCCCACGGGGCGAGGATGTGGCGGATGCGGACGGTTACGACATCGGCAAGGGCGCCGGCTTCTACGTCGATGCCAC GCAAGCGCCATGGGCGGCGCATTACCGCATGTACGATTACGTGGTGAACGAATTGCCGGCGTTGATCGAAGCGACTTTCG CCACCACCGGTGCGCGTGCGATCAGTGGCCATTCGATGGGTGGGCACGGCGCCTTGACCATCGCACTGAAGAACCCGGGC CGCTATCGCAGCGTGTCGGCGTTTTCGCCGATCGTGGCGCCCAGCCAGGTGCCGTGGGGCGAGAAAGCATTTGGCCAGTA TCTGGGCAACGACCGCACGACCTGGAAAGCCTACGATGCCACCGCATTGATTGCCGACGCTCAGGAGCGTTTGCCGCTGC TGATCGATCAGGGCGATGCGGACGAATTTCTGCAAAACCAGCTGAAAACCGCGCTATTTGAAGGCGCCGCCAAGGCCGCG GGCTACCCGGTGACGGTGCGGCTGCAGCCCGGTTATGACCACAGCTACTACTTCATTTCCAGCTTCATCGGCGAGCACAT TGCGCATCATGCTGCGGCCTTGCGTGGGTGA
Upstream 100 bases:
>100_bases CTGTCGGCCCATGTGGCACGCAAGAAGGGTCTGTTGCATTGATGGTCCAACCCTGCAACCGGCGATCCGGCTGCAGGGTT TTCTCTTCGTAAGGAATCTC
Downstream 100 bases:
>100_bases GTGCAGGCGCTCGTGTGCATGACCTAAAGACGCGCAGCGCAGCTGGGAGTTGCATGACACAGGCATCGGTTGCGCCTGTA CGCTGCCGCACCCTGGCTAT
Product: esterase
Products: NA
Alternate protein names: FGH [H]
Number of amino acids: Translated: 276; Mature: 276
Protein sequence:
>276_residues MERIEHRACFGGWQDVYRHQSHTLNCSMQVGVYLPPQAADGPLPVLYWLSGLTCTEQNFISKAGAQRYAAEHGVILIAPD TSPRGEDVADADGYDIGKGAGFYVDATQAPWAAHYRMYDYVVNELPALIEATFATTGARAISGHSMGGHGALTIALKNPG RYRSVSAFSPIVAPSQVPWGEKAFGQYLGNDRTTWKAYDATALIADAQERLPLLIDQGDADEFLQNQLKTALFEGAAKAA GYPVTVRLQPGYDHSYYFISSFIGEHIAHHAAALRG
Sequences:
>Translated_276_residues MERIEHRACFGGWQDVYRHQSHTLNCSMQVGVYLPPQAADGPLPVLYWLSGLTCTEQNFISKAGAQRYAAEHGVILIAPD TSPRGEDVADADGYDIGKGAGFYVDATQAPWAAHYRMYDYVVNELPALIEATFATTGARAISGHSMGGHGALTIALKNPG RYRSVSAFSPIVAPSQVPWGEKAFGQYLGNDRTTWKAYDATALIADAQERLPLLIDQGDADEFLQNQLKTALFEGAAKAA GYPVTVRLQPGYDHSYYFISSFIGEHIAHHAAALRG >Mature_276_residues MERIEHRACFGGWQDVYRHQSHTLNCSMQVGVYLPPQAADGPLPVLYWLSGLTCTEQNFISKAGAQRYAAEHGVILIAPD TSPRGEDVADADGYDIGKGAGFYVDATQAPWAAHYRMYDYVVNELPALIEATFATTGARAISGHSMGGHGALTIALKNPG RYRSVSAFSPIVAPSQVPWGEKAFGQYLGNDRTTWKAYDATALIADAQERLPLLIDQGDADEFLQNQLKTALFEGAAKAA GYPVTVRLQPGYDHSYYFISSFIGEHIAHHAAALRG
Specific function: Serine hydrolase involved in the detoxification of formaldehyde. Hydrolyzes S-formylglutathione to glutathione and formate [H]
COG id: COG0627
COG function: function code R; Predicted esterase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the esterase D family [H]
Homologues:
Organism=Homo sapiens, GI33413400, Length=279, Percent_Identity=56.989247311828, Blast_Score=323, Evalue=1e-88, Organism=Escherichia coli, GI1786551, Length=275, Percent_Identity=59.6363636363636, Blast_Score=362, Evalue=1e-101, Organism=Escherichia coli, GI1788477, Length=276, Percent_Identity=59.7826086956522, Blast_Score=350, Evalue=6e-98, Organism=Caenorhabditis elegans, GI17510185, Length=280, Percent_Identity=47.8571428571429, Blast_Score=264, Evalue=4e-71, Organism=Saccharomyces cerevisiae, GI6322393, Length=296, Percent_Identity=43.5810810810811, Blast_Score=224, Evalue=1e-59, Organism=Drosophila melanogaster, GI45551932, Length=281, Percent_Identity=52.3131672597865, Blast_Score=286, Evalue=8e-78, Organism=Drosophila melanogaster, GI24648347, Length=281, Percent_Identity=52.3131672597865, Blast_Score=286, Evalue=1e-77,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000801 - InterPro: IPR014186 [H]
Pfam domain/function: PF00756 Esterase [H]
EC number: =3.1.2.12 [H]
Molecular weight: Translated: 29995; Mature: 29995
Theoretical pI: Translated: 6.11; Mature: 6.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MERIEHRACFGGWQDVYRHQSHTLNCSMQVGVYLPPQAADGPLPVLYWLSGLTCTEQNFI CCCCHHHHHHCCHHHHHHCCCCEEEEEEEEEEEECCCCCCCCCHHHHHHCCCCCCHHHHH SKAGAQRYAAEHGVILIAPDTSPRGEDVADADGYDIGKGAGFYVDATQAPWAAHYRMYDY HHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHH VVNELPALIEATFATTGARAISGHSMGGHGALTIALKNPGRYRSVSAFSPIVAPSQVPWG HHHHHHHHHHHHHHHCCCCEECCCCCCCCEEEEEEECCCCCCCCHHHCCCCCCCCCCCCC EKAFGQYLGNDRTTWKAYDATALIADAQERLPLLIDQGDADEFLQNQLKTALFEGAAKAA HHHHHHHHCCCCCEEEECCCEEEEECHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHHHC GYPVTVRLQPGYDHSYYFISSFIGEHIAHHAAALRG CCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MERIEHRACFGGWQDVYRHQSHTLNCSMQVGVYLPPQAADGPLPVLYWLSGLTCTEQNFI CCCCHHHHHHCCHHHHHHCCCCEEEEEEEEEEEECCCCCCCCCHHHHHHCCCCCCHHHHH SKAGAQRYAAEHGVILIAPDTSPRGEDVADADGYDIGKGAGFYVDATQAPWAAHYRMYDY HHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHH VVNELPALIEATFATTGARAISGHSMGGHGALTIALKNPGRYRSVSAFSPIVAPSQVPWG HHHHHHHHHHHHHHHCCCCEECCCCCCCCEEEEEEECCCCCCCCHHHCCCCCCCCCCCCC EKAFGQYLGNDRTTWKAYDATALIADAQERLPLLIDQGDADEFLQNQLKTALFEGAAKAA HHHHHHHHCCCCCEEEECCCEEEEECHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHHHC GYPVTVRLQPGYDHSYYFISSFIGEHIAHHAAALRG CCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA