| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is engB
Identifier: 21241496
GI number: 21241496
Start: 864486
End: 865130
Strand: Direct
Name: engB
Synonym: XAC0725
Alternate gene names: 21241496
Gene position: 864486-865130 (Clockwise)
Preceding gene: 21241487
Following gene: 21241499
Centisome position: 16.7
GC content: 67.29
Gene sequence:
>645_bases ATGTCGCTCCTTATCGAACAAGCCCGCTACCACCTGTCCGCCCACAACGCCCGGCAATTGCCCGACGATGGCGGCTACGA GGTGGCCTTTGCCGGCCGCTCCAACGCCGGAAAATCCAGCGCGCTCAATGCGCTGACCCGCCAGAACGCGCTGGCGCGCG TGTCCAAGACGCCCGGCCGCACCCAGCAGCTGGTGTTCTTCCAGATCCAGCCCGAGCGCTACCTGGTGGACCTGCCCGGC TATGGCTACGCCAAGGTGCCGCAGGACCTGCAGGCGCACTGGCAGGCCTTCATCGACCGCTATTTCCGCACCCGCGAGGC CTTGCGCGGGCTGGTGGTGGTGATGGATATCCGCCACCCACTGAAGGATTACGACCTGCAGATGCTCGGTTACGCCGCCG AGCGCGGCCTGCCCGCGCACGGCTTGCTGACCAAGGCCGACAAGCTCGGCCGTGGCCAGCAGATGCAGACCCTGCAGAAG GTCAAGAAAGAAGTGACCTCGCGCTTCGGCGACAGCGTGACCGTGCAGACCTACTCGGGCGAGTCGCGCCAGGGCGTGGA CGAACTGCGCGGGATCGTCGGTGGCTGGCTGGGCCTGGATGGTGCACCGCCTGCAGCGGAGGGTGAACCGGGCCAGGCGC CATGA
Upstream 100 bases:
>100_bases TGGCAGTGGCAGGCGTGCTTCGATTATCGACACGCCTTTGCGCCAGGGTCAACGAACAGTGCAGCAAAACGGCCAGGCCC GAACGTGCGATCCTAAGGGG
Downstream 100 bases:
>100_bases CGCCCGCCCCGGCAGGCAGTTCAGGACGGCGAGCCAGGGCTCGTCGTTTTCAGGTGCGGCATCGGTGGGCACAGGGGCCG GGTTGCGCCTAGGGAGCGGG
Product: ribosome biogenesis GTP-binding protein YsxC
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 214; Mature: 213
Protein sequence:
>214_residues MSLLIEQARYHLSAHNARQLPDDGGYEVAFAGRSNAGKSSALNALTRQNALARVSKTPGRTQQLVFFQIQPERYLVDLPG YGYAKVPQDLQAHWQAFIDRYFRTREALRGLVVVMDIRHPLKDYDLQMLGYAAERGLPAHGLLTKADKLGRGQQMQTLQK VKKEVTSRFGDSVTVQTYSGESRQGVDELRGIVGGWLGLDGAPPAAEGEPGQAP
Sequences:
>Translated_214_residues MSLLIEQARYHLSAHNARQLPDDGGYEVAFAGRSNAGKSSALNALTRQNALARVSKTPGRTQQLVFFQIQPERYLVDLPG YGYAKVPQDLQAHWQAFIDRYFRTREALRGLVVVMDIRHPLKDYDLQMLGYAAERGLPAHGLLTKADKLGRGQQMQTLQK VKKEVTSRFGDSVTVQTYSGESRQGVDELRGIVGGWLGLDGAPPAAEGEPGQAP >Mature_213_residues SLLIEQARYHLSAHNARQLPDDGGYEVAFAGRSNAGKSSALNALTRQNALARVSKTPGRTQQLVFFQIQPERYLVDLPGY GYAKVPQDLQAHWQAFIDRYFRTREALRGLVVVMDIRHPLKDYDLQMLGYAAERGLPAHGLLTKADKLGRGQQMQTLQKV KKEVTSRFGDSVTVQTYSGESRQGVDELRGIVGGWLGLDGAPPAAEGEPGQAP
Specific function: Necessary for normal cell division and for the maintenance of normal septation
COG id: COG0218
COG function: function code R; Predicted GTPase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 G (guanine nucleotide-binding) domain
Homologues:
Organism=Homo sapiens, GI56549685, Length=192, Percent_Identity=29.6875, Blast_Score=80, Evalue=2e-15, Organism=Escherichia coli, GI145693205, Length=211, Percent_Identity=48.8151658767773, Blast_Score=198, Evalue=2e-52, Organism=Saccharomyces cerevisiae, GI6320543, Length=189, Percent_Identity=28.042328042328, Blast_Score=70, Evalue=3e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): ENGB_XANAC (Q8PPG1)
Other databases:
- EMBL: AE008923 - RefSeq: NP_641078.1 - ProteinModelPortal: Q8PPG1 - SMR: Q8PPG1 - GeneID: 1154796 - GenomeReviews: AE008923_GR - KEGG: xac:XAC0725 - NMPDR: fig|190486.1.peg.722 - HOGENOM: HBG447097 - OMA: THFVTSA - ProtClustDB: PRK00454 - BioCyc: XAXO190486:XAC0725-MONOMER - GO: GO:0005622 - HAMAP: MF_00321 - InterPro: IPR019987 - InterPro: IPR002917 - TIGRFAMs: TIGR03598
Pfam domain/function: PF01926 MMR_HSR1
EC number: NA
Molecular weight: Translated: 23591; Mature: 23460
Theoretical pI: Translated: 9.67; Mature: 9.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLLIEQARYHLSAHNARQLPDDGGYEVAFAGRSNAGKSSALNALTRQNALARVSKTPGR CCHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCC TQQLVFFQIQPERYLVDLPGYGYAKVPQDLQAHWQAFIDRYFRTREALRGLVVVMDIRHP CEEEEEEEECCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCC LKDYDLQMLGYAAERGLPAHGLLTKADKLGRGQQMQTLQKVKKEVTSRFGDSVTVQTYSG HHHCCHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCEEEEEECC ESRQGVDELRGIVGGWLGLDGAPPAAEGEPGQAP CCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure SLLIEQARYHLSAHNARQLPDDGGYEVAFAGRSNAGKSSALNALTRQNALARVSKTPGR CHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCC TQQLVFFQIQPERYLVDLPGYGYAKVPQDLQAHWQAFIDRYFRTREALRGLVVVMDIRHP CEEEEEEEECCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCC LKDYDLQMLGYAAERGLPAHGLLTKADKLGRGQQMQTLQKVKKEVTSRFGDSVTVQTYSG HHHCCHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCEEEEEECC ESRQGVDELRGIVGGWLGLDGAPPAAEGEPGQAP CCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12024217