| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
Click here to switch to the map view.
The map label for this gene is iroN [C]
Identifier: 21241477
GI number: 21241477
Start: 835346
End: 838054
Strand: Direct
Name: iroN [C]
Synonym: XAC0706
Alternate gene names: 21241477
Gene position: 835346-838054 (Clockwise)
Preceding gene: 21241476
Following gene: 21241478
Centisome position: 16.14
GC content: 60.5
Gene sequence:
>2709_bases ATGTCGCCTCTCCCGCGTGCCTCGCTGCGTTGTTGTTCGCCCTCGTCGCTGTCCCTTGCCATTGCGCTGTCGCTGCTTGC CTGCGGCGCCAACGCGCAGACACAGGACGCATCGGCGGCGGCGGCGGCGCAGATCTCCCAACTCGATGCCATCAAGGTCA CCAGCTCGTACCAGAAGAGCCTGATCACGGCCATGGACAACAAGCGCGACGACGTGCGCATGACCGACGGCATCTCTGCG CAGGACATCGGCAAGTTTCCTGCCGAAAACATCGCCGAGGCGATCCAGCGCATTCCCGGTGTGCAGATTTCCACTATCAA CGGGCGCGGTTCCACCATTAGCGTGCGTGGCCTGGGGCCGCAGTATTCGGCCACCACCATCAACGGCCAGGTGATCAAAA GCGCCGATTTCACCGATGGCTTCCGCTACGACATCATCCAGCCAGAAGTAGCCGCCGGCATCGAGGTGATCAAATCGCCA TCGGCGGACATGGACGCCGGTGGCCTATCGGGCACGGTCAACATCAACACCACCAAACCCCTGGACTACCAGCAGACCAA GCTGCTGTTCTCAGCCAAAACGCAGTACTCCGAGTTTGCCGGCGGTTCGCCAACGCCCAAGGGCGTGCTGACCTATATCG ACCAGTTCAAGTTCGGTGGCGGCGATCTTGGCGTGTTCCTCAGCGCCGGCTATCAGAAGCTCAAGGATCGCGCCGATTAT CTGTGGATCGACCGTTGGTACACGCAGGCCACCGACGCCGGCACGTTGTATATCCCACGCCGTCCGCGCTATCGCTCGAT CGAGCGCGAGACCACGCGCAAGATGTTCAATGGCGGGCTGCAATGGAAGCCTAGCGAACAGCTGGAGATGAACCTCACTG CGCTGTATTCGCAGGACAGGACCGCCAACGACATGAACCAGCTGGTGTACTCTTTCGAGCGCAGTCCGCTGACAGTGCTG CAGACCAACGGGCTGACCGCCACACAGGTGTCGGCGTCGGATTACTGGCTGGAAAATAATCACCAGATCGAACAGCACAA TCTGTCCACTCAGTTGCTCACCTACGACTTCAAGTGGACGGGCGATGCCTGGACGCTGAGTGGCGCGGCCAATTACACCC AGGGCAAGACCGACGAGAACGAGCGCGCCGCGATCCTGGGACGGATTCCCTCGGCAACGCTGCTGGATACCTCCAATCCC GACGCGATCTCGCTGACCACCGATGCCGATGCCACTGACGCCAGTGCATGGAACAAGGCCAATCTGGTGCGCAGCGAATA CCCCAACGGTTCCATCCAATCGCTCAGCAACAAGGAATGGTCGCTGCAACTGGATGCCGAACGGTATCTTGAACTGGGCG CGTTGAACGCGGTGCGCTTCGGTGCCAAATACCGTCGCGAAACCTTCGATCGCGATGTGCGCCGGCGCGACTTCCTGTAT CTGCTCAGGACCGGTGCGGTGTCCGGCTTCGACATGTTCCCGGAGCTGTCCGCAGCCAGCAGCACGGTCAGCAACTTCCT TGACGGACAACTCGCCTCGCAGGACAGCTGGGTCACCCCGGACGTGGGGGCTTATGCGCGCTCGCTGGCGGCCGCGGGCA TCACCGTGCCGGTGCTGTTTGCACCGCAGAGCAGCTACAGCATCGAGAACGACATTTCTTCGGCGTATGCGATGGCGCGC ATCGACACCGACATCGGCAGCATGCGTCTGCGCGGCAATGTCGGCATGCGCTACGAAAATACCAAACGCACCACCGATAC CTACCTGACTCAGACGCAAGCCGCCAGCGACGACGCCAATGTCGTGGTCGGCACCGCTCGCGCGCCCTACGAGTATTCCA ACTGGTTGCCCAGCCTGAATCTGGTGCTGGATATGCGCGAAGACTTGTTGCTGCGCTTTGCGGCCGCCAAGGTCCTGGTG CGGCCGATTCTGGACAGCAACACCGCGATCGCTTCGACGATTTCGACCGGCACCAATACTGGCGGCACCACCACCTATGT CGTCGCCCAGGGCCAGACCGATCTGAAGGCATTGACCGCTGACCAAGCCGACCTGAGCCTGGAGTGGTATTACGGCAACG GCGGCGCGCTGACCGTGGCCGGATTCTGGAAAAACATCAAGAACGGCACCTTCAATAGCATCGTTTGCCCGGCCGCCTTT AACGGCACCGTGCTGTCCAGCAATGCAGCCGGCGATTGTGTGAGTAGTAACGGCGATATCTACGAGATCACCGCCACCAC CAATGATCCGAGCAAGGTAAAGATTCGCGGTTACGAGCTGGGCTGGACGCAATCGCTGGATGCCTGGTTGCCGATCGATG GTTTCGGGTTCACCACCAATTTCACCCGGGTGATTCCGCAGCGCGATACCGATTTCAAGATCCGCAACCTGTCAGAAAAG ACCTGGAACGCGACCGCGTACTGGGAGAGCGCGCACTACTCGGCACGCGTGTCGCTCAATCATCGCAGCGAGTACGAACA GGACAGCAGCGACAGCTTCTTCGCGCGCGAAGGCCACATCATGAAGGCACGCACGCAGCTGGATGCAGTGCTTGGCTACC AGGTCAACGACAAGCTGAGTTTCCAGCTGGGCGGCCTGAATCTCACCAACCGAAAGGAAGAAGCGTACAAGGACATCCCC AGCCGCTGGCAGATGACCGGCGTCACTGGTCGAAGCTACTACCTGTCGATGCAGTGGGACATGCTTTGA
Upstream 100 bases:
>100_bases GTGCGCGCGTGGTTGGGTTGCCAGCGCCGGGATCTGTCATCGCTGATCGATCGGAACGCCAGTCGCGTTGTCGTCCAGCC ATTCCACTTCAGGATTTCTC
Downstream 100 bases:
>100_bases TGCTGAGGCAGCGCGCTTCGGGCCGCCGTGCACGGTTGCGTGCGGCGTCCAGCAGTGAGGGCGACAGTGCGGTTTCGTTG GAAGCGTGCCATGCAGTGCT
Product: TonB-dependent receptor
Products: NA
Alternate protein names: Nb-Dependent Receptor; NB-Dependent Receptor Plug; NB-Dependent Outer Membrane Receptor; NB-Dependent Receptor Subfamily; Nb-Dependent Outer Membrane Receptor Protein; Outer Membrane Protein; NB-Dependent Outer Membrane Receptor Protein; Outer Membrane Insertion C-Terminal Signal; NB-Dependent Receptor Subfamily Protein; NB-Dependent Receptor Protein; NB Dependent Receptor-Related Protein; Nucleoside Diphosphate Kinase; Crossover Junction Endodeoxyribonuclease RuvC; NB Dependent Receptor For Iron Chelates; Outer Membrane Receptor Proteins Mostly Fe Transport-Like; 50S Ribosomal Protein L; NB-Dependent Outer Membrane Ferripyoverdine Receptor; 3-Dehydroquinate Synthase; NB Dependent Receptor Protein; 1-(5-Phosphoribosyl)-5-; Rhodanese-Like Protein; Argininosuccinate Synthase
Number of amino acids: Translated: 902; Mature: 901
Protein sequence:
>902_residues MSPLPRASLRCCSPSSLSLAIALSLLACGANAQTQDASAAAAAQISQLDAIKVTSSYQKSLITAMDNKRDDVRMTDGISA QDIGKFPAENIAEAIQRIPGVQISTINGRGSTISVRGLGPQYSATTINGQVIKSADFTDGFRYDIIQPEVAAGIEVIKSP SADMDAGGLSGTVNINTTKPLDYQQTKLLFSAKTQYSEFAGGSPTPKGVLTYIDQFKFGGGDLGVFLSAGYQKLKDRADY LWIDRWYTQATDAGTLYIPRRPRYRSIERETTRKMFNGGLQWKPSEQLEMNLTALYSQDRTANDMNQLVYSFERSPLTVL QTNGLTATQVSASDYWLENNHQIEQHNLSTQLLTYDFKWTGDAWTLSGAANYTQGKTDENERAAILGRIPSATLLDTSNP DAISLTTDADATDASAWNKANLVRSEYPNGSIQSLSNKEWSLQLDAERYLELGALNAVRFGAKYRRETFDRDVRRRDFLY LLRTGAVSGFDMFPELSAASSTVSNFLDGQLASQDSWVTPDVGAYARSLAAAGITVPVLFAPQSSYSIENDISSAYAMAR IDTDIGSMRLRGNVGMRYENTKRTTDTYLTQTQAASDDANVVVGTARAPYEYSNWLPSLNLVLDMREDLLLRFAAAKVLV RPILDSNTAIASTISTGTNTGGTTTYVVAQGQTDLKALTADQADLSLEWYYGNGGALTVAGFWKNIKNGTFNSIVCPAAF NGTVLSSNAAGDCVSSNGDIYEITATTNDPSKVKIRGYELGWTQSLDAWLPIDGFGFTTNFTRVIPQRDTDFKIRNLSEK TWNATAYWESAHYSARVSLNHRSEYEQDSSDSFFAREGHIMKARTQLDAVLGYQVNDKLSFQLGGLNLTNRKEEAYKDIP SRWQMTGVTGRSYYLSMQWDML
Sequences:
>Translated_902_residues MSPLPRASLRCCSPSSLSLAIALSLLACGANAQTQDASAAAAAQISQLDAIKVTSSYQKSLITAMDNKRDDVRMTDGISA QDIGKFPAENIAEAIQRIPGVQISTINGRGSTISVRGLGPQYSATTINGQVIKSADFTDGFRYDIIQPEVAAGIEVIKSP SADMDAGGLSGTVNINTTKPLDYQQTKLLFSAKTQYSEFAGGSPTPKGVLTYIDQFKFGGGDLGVFLSAGYQKLKDRADY LWIDRWYTQATDAGTLYIPRRPRYRSIERETTRKMFNGGLQWKPSEQLEMNLTALYSQDRTANDMNQLVYSFERSPLTVL QTNGLTATQVSASDYWLENNHQIEQHNLSTQLLTYDFKWTGDAWTLSGAANYTQGKTDENERAAILGRIPSATLLDTSNP DAISLTTDADATDASAWNKANLVRSEYPNGSIQSLSNKEWSLQLDAERYLELGALNAVRFGAKYRRETFDRDVRRRDFLY LLRTGAVSGFDMFPELSAASSTVSNFLDGQLASQDSWVTPDVGAYARSLAAAGITVPVLFAPQSSYSIENDISSAYAMAR IDTDIGSMRLRGNVGMRYENTKRTTDTYLTQTQAASDDANVVVGTARAPYEYSNWLPSLNLVLDMREDLLLRFAAAKVLV RPILDSNTAIASTISTGTNTGGTTTYVVAQGQTDLKALTADQADLSLEWYYGNGGALTVAGFWKNIKNGTFNSIVCPAAF NGTVLSSNAAGDCVSSNGDIYEITATTNDPSKVKIRGYELGWTQSLDAWLPIDGFGFTTNFTRVIPQRDTDFKIRNLSEK TWNATAYWESAHYSARVSLNHRSEYEQDSSDSFFAREGHIMKARTQLDAVLGYQVNDKLSFQLGGLNLTNRKEEAYKDIP SRWQMTGVTGRSYYLSMQWDML >Mature_901_residues SPLPRASLRCCSPSSLSLAIALSLLACGANAQTQDASAAAAAQISQLDAIKVTSSYQKSLITAMDNKRDDVRMTDGISAQ DIGKFPAENIAEAIQRIPGVQISTINGRGSTISVRGLGPQYSATTINGQVIKSADFTDGFRYDIIQPEVAAGIEVIKSPS ADMDAGGLSGTVNINTTKPLDYQQTKLLFSAKTQYSEFAGGSPTPKGVLTYIDQFKFGGGDLGVFLSAGYQKLKDRADYL WIDRWYTQATDAGTLYIPRRPRYRSIERETTRKMFNGGLQWKPSEQLEMNLTALYSQDRTANDMNQLVYSFERSPLTVLQ TNGLTATQVSASDYWLENNHQIEQHNLSTQLLTYDFKWTGDAWTLSGAANYTQGKTDENERAAILGRIPSATLLDTSNPD AISLTTDADATDASAWNKANLVRSEYPNGSIQSLSNKEWSLQLDAERYLELGALNAVRFGAKYRRETFDRDVRRRDFLYL LRTGAVSGFDMFPELSAASSTVSNFLDGQLASQDSWVTPDVGAYARSLAAAGITVPVLFAPQSSYSIENDISSAYAMARI DTDIGSMRLRGNVGMRYENTKRTTDTYLTQTQAASDDANVVVGTARAPYEYSNWLPSLNLVLDMREDLLLRFAAAKVLVR PILDSNTAIASTISTGTNTGGTTTYVVAQGQTDLKALTADQADLSLEWYYGNGGALTVAGFWKNIKNGTFNSIVCPAAFN GTVLSSNAAGDCVSSNGDIYEITATTNDPSKVKIRGYELGWTQSLDAWLPIDGFGFTTNFTRVIPQRDTDFKIRNLSEKT WNATAYWESAHYSARVSLNHRSEYEQDSSDSFFAREGHIMKARTQLDAVLGYQVNDKLSFQLGGLNLTNRKEEAYKDIPS RWQMTGVTGRSYYLSMQWDML
Specific function: Not Yet Known. Postulated To Participate In Iron Transport. Outer Membrane Receptor For Colicins Ia And Ib. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Outer Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 99105; Mature: 98974
Theoretical pI: Translated: 5.02; Mature: 5.02
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPLPRASLRCCSPSSLSLAIALSLLACGANAQTQDASAAAAAQISQLDAIKVTSSYQKS CCCCCCCCEECCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCEEEEHHHHHHH LITAMDNKRDDVRMTDGISAQDIGKFPAENIAEAIQRIPGVQISTINGRGSTISVRGLGP HHHHHCCCCCCEEEECCCCHHHHCCCCHHHHHHHHHHCCCCEEEEECCCCCEEEEEECCC QYSATTINGQVIKSADFTDGFRYDIIQPEVAAGIEVIKSPSADMDAGGLSGTVNINTTKP CCCEEEECCEEEECCCCCCCCEEEECCCHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCC LDYQQTKLLFSAKTQYSEFAGGSPTPKGVLTYIDQFKFGGGDLGVFLSAGYQKLKDRADY CCHHHHEEEEEECCCHHHHCCCCCCCHHHHHHHHHHCCCCCCEEHHHHHHHHHHHCCCCE LWIDRWYTQATDAGTLYIPRRPRYRSIERETTRKMFNGGLQWKPSEQLEMNLTALYSQDR EEEEEHCCCCCCCCEEEECCCCCCCCHHHHHHHHHHCCCCCCCCCCHHEEEEEEEECCCC TANDMNQLVYSFERSPLTVLQTNGLTATQVSASDYWLENNHQIEQHNLSTQLLTYDFKWT CHHHHHHHHHHHCCCCEEEEEECCCEEEEECCCCEEECCCCEEHHCCCCEEEEEEEEEEC GDAWTLSGAANYTQGKTDENERAAILGRIPSATLLDTSNPDAISLTTDADATDASAWNKA CCEEEECCCCCCCCCCCCCCCCEEEEECCCCCEEEECCCCCEEEEECCCCCCCCCCCCCH NLVRSEYPNGSIQSLSNKEWSLQLDAERYLELGALNAVRFGAKYRRETFDRDVRRRDFLY HHHHHCCCCCCHHHCCCCCEEEEECHHHHHHHCCCHHHHHCHHHHHHHHHHHHHHHHHEE LLRTGAVSGFDMFPELSAASSTVSNFLDGQLASQDSWVTPDVGAYARSLAAAGITVPVLF EEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEE APQSSYSIENDISSAYAMARIDTDIGSMRLRGNVGMRYENTKRTTDTYLTQTQAASDDAN CCCCCCCCHHHHHHHEEEEEECCCCCCEEEECCCCCEECCCCCCCHHHEEECCCCCCCCC VVVGTARAPYEYSNWLPSLNLVLDMREDLLLRFAAAKVLVRPILDSNTAIASTISTGTNT EEEECCCCCCHHHHCCCCCEEEEECHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCC GGTTTYVVAQGQTDLKALTADQADLSLEWYYGNGGALTVAGFWKNIKNGTFNSIVCPAAF CCEEEEEEECCCCCCCEEECCCCCEEEEEEECCCCEEEEEEHHHHCCCCCCCEEECCCCC NGTVLSSNAAGDCVSSNGDIYEITATTNDPSKVKIRGYELGWTQSLDAWLPIDGFGFTTN CCEEEECCCCCCCCCCCCCEEEEEECCCCCCEEEEEEEECCCCCCCCCEECCCCCCCCCC FTRVIPQRDTDFKIRNLSEKTWNATAYWESAHYSARVSLNHRSEYEQDSSDSFFAREGHI EEEECCCCCCCEEEECCCCCCCCEEEEEECCCEEEEEEECCCCCCCCCCCCCEEECCCCE MKARTQLDAVLGYQVNDKLSFQLGGLNLTNRKEEAYKDIPSRWQMTGVTGRSYYLSMQWD EEHHHHHHHHCCEEECCEEEEEECCCCCCCCHHHHHHCCCCCEEEEECCCCEEEEEEEEE ML CC >Mature Secondary Structure SPLPRASLRCCSPSSLSLAIALSLLACGANAQTQDASAAAAAQISQLDAIKVTSSYQKS CCCCCCCEECCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCEEEEHHHHHHH LITAMDNKRDDVRMTDGISAQDIGKFPAENIAEAIQRIPGVQISTINGRGSTISVRGLGP HHHHHCCCCCCEEEECCCCHHHHCCCCHHHHHHHHHHCCCCEEEEECCCCCEEEEEECCC QYSATTINGQVIKSADFTDGFRYDIIQPEVAAGIEVIKSPSADMDAGGLSGTVNINTTKP CCCEEEECCEEEECCCCCCCCEEEECCCHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCC LDYQQTKLLFSAKTQYSEFAGGSPTPKGVLTYIDQFKFGGGDLGVFLSAGYQKLKDRADY CCHHHHEEEEEECCCHHHHCCCCCCCHHHHHHHHHHCCCCCCEEHHHHHHHHHHHCCCCE LWIDRWYTQATDAGTLYIPRRPRYRSIERETTRKMFNGGLQWKPSEQLEMNLTALYSQDR EEEEEHCCCCCCCCEEEECCCCCCCCHHHHHHHHHHCCCCCCCCCCHHEEEEEEEECCCC TANDMNQLVYSFERSPLTVLQTNGLTATQVSASDYWLENNHQIEQHNLSTQLLTYDFKWT CHHHHHHHHHHHCCCCEEEEEECCCEEEEECCCCEEECCCCEEHHCCCCEEEEEEEEEEC GDAWTLSGAANYTQGKTDENERAAILGRIPSATLLDTSNPDAISLTTDADATDASAWNKA CCEEEECCCCCCCCCCCCCCCCEEEEECCCCCEEEECCCCCEEEEECCCCCCCCCCCCCH NLVRSEYPNGSIQSLSNKEWSLQLDAERYLELGALNAVRFGAKYRRETFDRDVRRRDFLY HHHHHCCCCCCHHHCCCCCEEEEECHHHHHHHCCCHHHHHCHHHHHHHHHHHHHHHHHEE LLRTGAVSGFDMFPELSAASSTVSNFLDGQLASQDSWVTPDVGAYARSLAAAGITVPVLF EEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEE APQSSYSIENDISSAYAMARIDTDIGSMRLRGNVGMRYENTKRTTDTYLTQTQAASDDAN CCCCCCCCHHHHHHHEEEEEECCCCCCEEEECCCCCEECCCCCCCHHHEEECCCCCCCCC VVVGTARAPYEYSNWLPSLNLVLDMREDLLLRFAAAKVLVRPILDSNTAIASTISTGTNT EEEECCCCCCHHHHCCCCCEEEEECHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCC GGTTTYVVAQGQTDLKALTADQADLSLEWYYGNGGALTVAGFWKNIKNGTFNSIVCPAAF CCEEEEEEECCCCCCCEEECCCCCEEEEEEECCCCEEEEEEHHHHCCCCCCCEEECCCCC NGTVLSSNAAGDCVSSNGDIYEITATTNDPSKVKIRGYELGWTQSLDAWLPIDGFGFTTN CCEEEECCCCCCCCCCCCCEEEEEECCCCCCEEEEEEEECCCCCCCCCEECCCCCCCCCC FTRVIPQRDTDFKIRNLSEKTWNATAYWESAHYSARVSLNHRSEYEQDSSDSFFAREGHI EEEECCCCCCCEEEECCCCCCCCEEEEEECCCEEEEEEECCCCCCCCCCCCCEEECCCCE MKARTQLDAVLGYQVNDKLSFQLGGLNLTNRKEEAYKDIPSRWQMTGVTGRSYYLSMQWD EEHHHHHHHHCCEEECCEEEEEECCCCCCCCHHHHHHCCCCCEEEEECCCCEEEEEEEEE ML CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA