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The map label for this gene is xcsJ [H]

Identifier: 21241472

GI number: 21241472

Start: 830763

End: 831365

Strand: Direct

Name: xcsJ [H]

Synonym: XAC0701

Alternate gene names: 21241472

Gene position: 830763-831365 (Clockwise)

Preceding gene: 21241471

Following gene: 21241473

Centisome position: 16.05

GC content: 66.67

Gene sequence:

>603_bases
ATGATCCGCAAACAGCGCACGCGCGGCTTCACCTTGATCGAATTGTTGGTGGCCTTGGCGGTATTCGCGTTGGTGGCCGC
AGCTGCGGTGGCGGTGATGCGGCAGAGCATCGATCAGCGCGATGCCGTGCGCGCGCGACTGCAGCAGATTCGCGACTTTC
AATTGGCCCATGGCCTGCTGCGCAGCGACCTGCAGCAGGCCGCGGTGCGCCGTACCCGCAACAGCGAGGGTAGCGCCGCA
CGCAGCGCCTTTGTTGCGAGTGCGTCCGGGACGTACGGGCCCTTGTTCGGGTTTGTGCGACGTGGCTGGAGCAATCCGGA
CCAGGCGCCGCGTGCGTCGCTGCAATACGTGGAATATCGCATCGTGGATGGGCGGCTGGAGCGCAGCGCACGCTCTGCGC
TCGACGGCGGGGCAGCTGGCACGCCGCAAGTGTTGTTGCGCGGCGTACGTTCGGCGGCGGTGGCATTCCATTACCGGGCG
CAATGGAGCGATGGCTGGAGCGGTGGGCTTGAAGCGTTGCCGGATGCAGTCGCGCTGGAGCTGGACCTGGAGCACTGGGG
GCGCGTACGCCAACTGTTCCTGTTGCCGGAAGGGCGCACGTGA

Upstream 100 bases:

>100_bases
TGCCGGCTGGCGCGGCAGGCCTGTTGCGGATCGAGGTGCGCGTGCGTGCCGCAGGCCAAATGCAGGAAGTTGCCAGCCTG
AGCATGCTGCGGAGCGCAGA

Downstream 100 bases:

>100_bases
TGGCACTGCACGCACCTGCCAGGCAACGCGGCGTAGCCTTGCTCACGGTATTGCTGCTGGTTGCCGTGATGACCTTGCTG
ATGGCGGCCGTGCTGGAAGA

Product: type II secretion system protein J

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 200; Mature: 200

Protein sequence:

>200_residues
MIRKQRTRGFTLIELLVALAVFALVAAAAVAVMRQSIDQRDAVRARLQQIRDFQLAHGLLRSDLQQAAVRRTRNSEGSAA
RSAFVASASGTYGPLFGFVRRGWSNPDQAPRASLQYVEYRIVDGRLERSARSALDGGAAGTPQVLLRGVRSAAVAFHYRA
QWSDGWSGGLEALPDAVALELDLEHWGRVRQLFLLPEGRT

Sequences:

>Translated_200_residues
MIRKQRTRGFTLIELLVALAVFALVAAAAVAVMRQSIDQRDAVRARLQQIRDFQLAHGLLRSDLQQAAVRRTRNSEGSAA
RSAFVASASGTYGPLFGFVRRGWSNPDQAPRASLQYVEYRIVDGRLERSARSALDGGAAGTPQVLLRGVRSAAVAFHYRA
QWSDGWSGGLEALPDAVALELDLEHWGRVRQLFLLPEGRT
>Mature_200_residues
MIRKQRTRGFTLIELLVALAVFALVAAAAVAVMRQSIDQRDAVRARLQQIRDFQLAHGLLRSDLQQAAVRRTRNSEGSAA
RSAFVASASGTYGPLFGFVRRGWSNPDQAPRASLQYVEYRIVDGRLERSARSALDGGAAGTPQVLLRGVRSAAVAFHYRA
QWSDGWSGGLEALPDAVALELDLEHWGRVRQLFLLPEGRT

Specific function: Involved in a general secretion pathway (GSP) for the export of proteins. Required for the translocation of the multiple pectic enzymes [H]

COG id: COG4795

COG function: function code U; Type II secretory pathway, component PulJ

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GSP J family [H]

Homologues:

Organism=Escherichia coli, GI1789728, Length=200, Percent_Identity=25, Blast_Score=62, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010055
- InterPro:   IPR012902
- InterPro:   IPR001120 [H]

Pfam domain/function: PF07963 N_methyl [H]

EC number: NA

Molecular weight: Translated: 21983; Mature: 21983

Theoretical pI: Translated: 11.65; Mature: 11.65

Prosite motif: PS00409 PROKAR_NTER_METHYL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRKQRTRGFTLIELLVALAVFALVAAAAVAVMRQSIDQRDAVRARLQQIRDFQLAHGLL
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RSDLQQAAVRRTRNSEGSAARSAFVASASGTYGPLFGFVRRGWSNPDQAPRASLQYVEYR
HHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
IVDGRLERSARSALDGGAAGTPQVLLRGVRSAAVAFHYRAQWSDGWSGGLEALPDAVALE
HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCHHEEE
LDLEHWGRVRQLFLLPEGRT
ECHHHHHHHHHHEECCCCCC
>Mature Secondary Structure
MIRKQRTRGFTLIELLVALAVFALVAAAAVAVMRQSIDQRDAVRARLQQIRDFQLAHGLL
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RSDLQQAAVRRTRNSEGSAARSAFVASASGTYGPLFGFVRRGWSNPDQAPRASLQYVEYR
HHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
IVDGRLERSARSALDGGAAGTPQVLLRGVRSAAVAFHYRAQWSDGWSGGLEALPDAVALE
HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCHHEEE
LDLEHWGRVRQLFLLPEGRT
ECHHHHHHHHHHEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8407845 [H]