| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is xcsI
Identifier: 21241471
GI number: 21241471
Start: 830386
End: 830766
Strand: Direct
Name: xcsI
Synonym: XAC0700
Alternate gene names: NA
Gene position: 830386-830766 (Clockwise)
Preceding gene: 21241470
Following gene: 21241472
Centisome position: 16.04
GC content: 66.93
Gene sequence:
>381_bases ATGCGCCCTCTCGCTGACGCACGCGCATCGGGTGGATTTTCGCTGCTCGAACTGATGGTCGCGCTGGCGATCTTCGGCAT GGCGGTGGTCGGCCTGTTGAACCTTTCCGGCGAGAGCGCGCGCACAGCGATGGTGTTGGAAGAGCGCGCGCTTGCCGCGG TGGTGGCAGAAAACCAGGCGATTGAAGCGACGCTGGCGCCGGCTTCGGCAATCCGTGCGCCTGCGAACGGGCAGGTAATG CTCGGCGGGCGCAGCTGGGAGTGGCAACGCCAGTCGCTGCCGGCTGGCGCGGCAGGCCTGTTGCGGATCGAGGTGCGCGT GCGTGCCGCAGGCCAAATGCAGGAAGTTGCCAGCCTGAGCATGCTGCGGAGCGCAGAATGA
Upstream 100 bases:
>100_bases TTCGATCCCACCGGCGCGGCCACACCGCAGCGCGTCGCATTGGGCGATGGCCGGCAACAGATGCAGATCGTGGTAGATGC CGCAGGCGTAGTGCAGGTCG
Downstream 100 bases:
>100_bases TCCGCAAACAGCGCACGCGCGGCTTCACCTTGATCGAATTGTTGGTGGCCTTGGCGGTATTCGCGTTGGTGGCCGCAGCT GCGGTGGCGGTGATGCGGCA
Product: type II secretion system protein I
Products: NA
Alternate protein names: Type II Secretory Pathway Pseudopilin
Number of amino acids: Translated: 126; Mature: 126
Protein sequence:
>126_residues MRPLADARASGGFSLLELMVALAIFGMAVVGLLNLSGESARTAMVLEERALAAVVAENQAIEATLAPASAIRAPANGQVM LGGRSWEWQRQSLPAGAAGLLRIEVRVRAAGQMQEVASLSMLRSAE
Sequences:
>Translated_126_residues MRPLADARASGGFSLLELMVALAIFGMAVVGLLNLSGESARTAMVLEERALAAVVAENQAIEATLAPASAIRAPANGQVM LGGRSWEWQRQSLPAGAAGLLRIEVRVRAAGQMQEVASLSMLRSAE >Mature_126_residues MRPLADARASGGFSLLELMVALAIFGMAVVGLLNLSGESARTAMVLEERALAAVVAENQAIEATLAPASAIRAPANGQVM LGGRSWEWQRQSLPAGAAGLLRIEVRVRAAGQMQEVASLSMLRSAE
Specific function: Unknown
COG id: COG2165
COG function: function code NU; Type II secretory pathway, pseudopilin PulG
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13144; Mature: 13144
Theoretical pI: Translated: 6.84; Mature: 6.84
Prosite motif: PS00409 PROKAR_NTER_METHYL
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.6 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.6 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRPLADARASGGFSLLELMVALAIFGMAVVGLLNLSGESARTAMVLEERALAAVVAENQA CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCC IEATLAPASAIRAPANGQVMLGGRSWEWQRQSLPAGAAGLLRIEVRVRAAGQMQEVASLS EEEEECCHHHHCCCCCCEEEECCCCCCCHHHCCCCCCCEEEEEEEEEECCCHHHHHHHHH MLRSAE HHHCCC >Mature Secondary Structure MRPLADARASGGFSLLELMVALAIFGMAVVGLLNLSGESARTAMVLEERALAAVVAENQA CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCC IEATLAPASAIRAPANGQVMLGGRSWEWQRQSLPAGAAGLLRIEVRVRAAGQMQEVASLS EEEEECCHHHHCCCCCCEEEECCCCCCCHHHCCCCCCCEEEEEEEEEECCCHHHHHHHHH MLRSAE HHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA