Click here to switch to the map view.

The map label for this gene is mreD [H]

Identifier: 21241429

GI number: 21241429

Start: 779428

End: 779913

Strand: Direct

Name: mreD [H]

Synonym: XAC0658

Alternate gene names: 21241429

Gene position: 779428-779913 (Clockwise)

Preceding gene: 21241428

Following gene: 21241430

Centisome position: 15.06

GC content: 67.7

Gene sequence:

>486_bases
ATGACCCGCATGCGCAACACCTGGATCCTGCCGGCGAGCATCTTCATTGCGCTGGTCCTGGGCCTGCTGCCGTTGCCGAT
GGTGGTGCAGCCGCTGCGGCCTTACTGGCTGGCGTTGGTGCTGGCGTACTGGGTCATCGAGGAGCCGGATCGGGTCGGGC
TGGGCCTGGCCTTCGTGGCCGGCGTGCTGGCCGACCTGCTGTATGGCGGGCTGCTCGGCGAACAGGCGCTGCGGCTGGTG
ATCATGACCTTCATCCTGCAGCGCTTCCGCGCGCGCATGCGGTTTTTCCCGGTCTCGCAACAGGCGCTGGCAATCGGCGG
GCTGCTGCTCAACGACCGCATCGTGTCTTCGGCAGTGCATCTGGCCGTGGGCGAGCCGACCCTGCCGTGGAGCTACTGGT
GGGCGCCGCTGCTGGGCATGGCCTTGTGGCCGCCGCTGTTCGTGGTGCTGGATGCGGTGCGGCTGGGCAAGCGGGGCAAG
AAATAA

Upstream 100 bases:

>100_bases
GGGCAAGCAACCGCAACGCCCCGCCAACGCAGGGCGCCGCGCCTAACGATTCCCGATTCCCGATTCCCGATTCCCGTCCG
TCTCCGCCGGAGACGGACCG

Downstream 100 bases:

>100_bases
GCCATGCACGGGCGCCGTCATCCGAAGAATCCGCATGCGGAGGCCGAACAGTTCCGCCGCCGCGCGGTGCTGGGCTTTGC
GATGGTGGTGATCTGCCTGG

Product: rod shape-determining protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 161; Mature: 160

Protein sequence:

>161_residues
MTRMRNTWILPASIFIALVLGLLPLPMVVQPLRPYWLALVLAYWVIEEPDRVGLGLAFVAGVLADLLYGGLLGEQALRLV
IMTFILQRFRARMRFFPVSQQALAIGGLLLNDRIVSSAVHLAVGEPTLPWSYWWAPLLGMALWPPLFVVLDAVRLGKRGK
K

Sequences:

>Translated_161_residues
MTRMRNTWILPASIFIALVLGLLPLPMVVQPLRPYWLALVLAYWVIEEPDRVGLGLAFVAGVLADLLYGGLLGEQALRLV
IMTFILQRFRARMRFFPVSQQALAIGGLLLNDRIVSSAVHLAVGEPTLPWSYWWAPLLGMALWPPLFVVLDAVRLGKRGK
K
>Mature_160_residues
TRMRNTWILPASIFIALVLGLLPLPMVVQPLRPYWLALVLAYWVIEEPDRVGLGLAFVAGVLADLLYGGLLGEQALRLVI
MTFILQRFRARMRFFPVSQQALAIGGLLLNDRIVSSAVHLAVGEPTLPWSYWWAPLLGMALWPPLFVVLDAVRLGKRGKK

Specific function: Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins [H]

COG id: COG2891

COG function: function code M; Cell shape-determining protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mreD family [H]

Homologues:

Organism=Escherichia coli, GI1789647, Length=153, Percent_Identity=31.3725490196078, Blast_Score=68, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007227 [H]

Pfam domain/function: PF04093 MreD [H]

EC number: NA

Molecular weight: Translated: 18030; Mature: 17899

Theoretical pI: Translated: 11.07; Mature: 11.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRMRNTWILPASIFIALVLGLLPLPMVVQPLRPYWLALVLAYWVIEEPDRVGLGLAFVA
CCCCCCCEECHHHHHHHHHHHHHCHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHH
GVLADLLYGGLLGEQALRLVIMTFILQRFRARMRFFPVSQQALAIGGLLLNDRIVSSAVH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
LAVGEPTLPWSYWWAPLLGMALWPPLFVVLDAVRLGKRGKK
HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
TRMRNTWILPASIFIALVLGLLPLPMVVQPLRPYWLALVLAYWVIEEPDRVGLGLAFVA
CCCCCCEECHHHHHHHHHHHHHCHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHH
GVLADLLYGGLLGEQALRLVIMTFILQRFRARMRFFPVSQQALAIGGLLLNDRIVSSAVH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
LAVGEPTLPWSYWWAPLLGMALWPPLFVVLDAVRLGKRGKK
HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]