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The map label for this gene is tsr [H]

Identifier: 21241382

GI number: 21241382

Start: 722047

End: 724059

Strand: Reverse

Name: tsr [H]

Synonym: XAC0611

Alternate gene names: 21241382

Gene position: 724059-722047 (Counterclockwise)

Preceding gene: 21241383

Following gene: 21241380

Centisome position: 13.99

GC content: 63.84

Gene sequence:

>2013_bases
ATGCAGCACTATGCCGATAAGGTCAAAGCAGGCGAGCTGAGCCTGGAGCAAGCCAAGGAAGCCGCACGCACCACGCTGGC
CGACATGCGTACCAACGACGGCGTGGATTACTTCTTCATCGTCGACCCGCAGATGCGCATCCTGATGCATCCCAAGCGCC
CGGTCGGCACCGACATGACCGACTACAAGAGCGATGCCGGGCAATACGTGTACCGCGATATCAAGACCGCCATCGATAGC
GGCGACGGCTTCAGCTATTACGACGCGCCCAAGCCGGGCAAGAAGGAACAGCTGCCCAAGATCAGCTACGCCAAGACCTT
TCCGGCCTGGAACTGGGTGCTGGTGATGGGCGTCTATGCCGAGGACATTCAAGTACAGGCGTGGGGCTTCACGCGCACCT
TGACGCTGATCGGCGGCGCGCTGGTGGCGCTGGTGATCGGGCTGTGCTGGTTGATCGCATCGGCCATGGCCGCGCCGCTG
CGCGCTGCCTCGCGCACTGCCGAAGCCATCGCCTCGGGCCGCTTCGACAACGACATCCGCGTGGAATCGCGCGATGAAAC
CGGCCAGCTGATGCACAGCATGCAGCAAATGCAGAACCAGCTGCAGCGCTTCAACGGCGAGATGCAGACCATGATCCGTC
TGCAACAGGGCGAGAACATCGCGCACCGCATTCCGGAAGATTTCCCAGGCGATTACGGCACGCTGGCGCACGGCGTCAAC
ACGGTGGTGTTCGAGCACCTGGACGCCATCAACGAAGCGATGGACGTGATGAGCGACTACGGCCGTGGCGATCTGCGCCG
CGACATGCGTCGCCTGCCCGGCCAGCGCGCTGCCCTGCACCAGGCGCTGGACACGGTGAAAGAGAATCTGTCTGCGATCA
ACAGCGACATCGCGCGCCTGGCCGATGCAGCGGCGCGCGGCGATTTCTCCGCACGTGGCGATCAATCGCATTATCAATTC
GCGTTTGCGGAAATGGTGCAGGCGTTGAACCGGCTGATGCAGCAGGCCGACGCTGGGTTGGACGATGTGGGCCGCATCAT
GGCCGCGATCGCCGACGGCGATCTGTCGCAGCGCGTGGAGTCGCATTACGAAGGCGCGTTCGGCCGCCTTGCCGATGCAG
CCAACCGCACTGCCATCCAATTGACCGGCATCGTGCAGGGCATCCAGCACTCGGCCGAGATGATCAACACCGCGGCAGGC
GAGATCGCCAGCGGTAATGCCGACTTGTCCACGCGCACCGAACACCAGGCAGCGAACCTGGAAGAAACCGCCGCGTCGAT
GGAAGAACTCACCTCCACCGTGCGCCAGAACGCCGACAACGCGCGCCAGGCCAACCAATTGGTCAAGGGCACCGGCGATG
TGGCCGAGAGCGGCGGCCGCGTGGTGCAGGAAGTGGTGAGCACCATGCAGGCGATCACGCAGTCGTCGGCGCGTATTTCC
GACATCATCGGAGTGATCGATGGCATCGCCTTCCAGACCAATATCCTTGCGTTGAATGCGGCCGTGGAAGCAGCGCGCGC
AGGCGAGCAAGGCCGTGGTTTTGCCGTGGTCGCCACCGAAGTGCGCGCCCTGGCGCAGCGCTCGGCCGGTGCCGCCAAGG
AAATCAAACAGCTGATTTCCGATTCGGTAGAAAAAGTGGCGCAAGGCTCGGAGCTGGTGCAACAGGCCGGCAGCACCATG
ACCGAGGTGGTCAGCTCGGTGAAGCGCGTGACCGACATCATGGCCGAGATCACGGCGGCCAGCACCGAACAAAGCGCCGG
CATCGAACAGGTCAGCACCACGGTGATGCAGCTGGACGAAATGACGCAGCAAAACGCCGCATTGGTGGAAGAAGCCACCG
CGGCGGCGCGCAGCATGGAAGACCAGGCGGCAGACCTGACCCGCGCCGTGGCGGTGTTCCGGTTGACATCGGATGCCGGC
CAGCAGCAGGCACGTAGCGCAGCCAACGCGCCTGCCACTACGAAGCCGGCGGCCGCCAGGCAAGCTGCACACGACCACAG
GCTGCGTGCATAA

Upstream 100 bases:

>100_bases
GATCCTGCTGGCGATGGCCGCCGCGCGTCTGCAATATCTGGATCTGGTGGAAGCGCGCAAGCTCAGCGTCAAGACCGAGG
TGGAGATGGGCCTGACGGTA

Downstream 100 bases:

>100_bases
GCAATGTCGCCTCCCGCACACGAGCGCTCGCTCCTGTGCGGGAGGCGATATCGGTCACATGTGCAGCGATGACGGCGACT
GATGGTTTGGAATCGTGACA

Product: chemotaxis protein

Products: NA

Alternate protein names: Citrate chemoreceptor protein [H]

Number of amino acids: Translated: 670; Mature: 670

Protein sequence:

>670_residues
MQHYADKVKAGELSLEQAKEAARTTLADMRTNDGVDYFFIVDPQMRILMHPKRPVGTDMTDYKSDAGQYVYRDIKTAIDS
GDGFSYYDAPKPGKKEQLPKISYAKTFPAWNWVLVMGVYAEDIQVQAWGFTRTLTLIGGALVALVIGLCWLIASAMAAPL
RAASRTAEAIASGRFDNDIRVESRDETGQLMHSMQQMQNQLQRFNGEMQTMIRLQQGENIAHRIPEDFPGDYGTLAHGVN
TVVFEHLDAINEAMDVMSDYGRGDLRRDMRRLPGQRAALHQALDTVKENLSAINSDIARLADAAARGDFSARGDQSHYQF
AFAEMVQALNRLMQQADAGLDDVGRIMAAIADGDLSQRVESHYEGAFGRLADAANRTAIQLTGIVQGIQHSAEMINTAAG
EIASGNADLSTRTEHQAANLEETAASMEELTSTVRQNADNARQANQLVKGTGDVAESGGRVVQEVVSTMQAITQSSARIS
DIIGVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVATEVRALAQRSAGAAKEIKQLISDSVEKVAQGSELVQQAGSTM
TEVVSSVKRVTDIMAEITAASTEQSAGIEQVSTTVMQLDEMTQQNAALVEEATAAARSMEDQAADLTRAVAVFRLTSDAG
QQQARSAANAPATTKPAAARQAAHDHRLRA

Sequences:

>Translated_670_residues
MQHYADKVKAGELSLEQAKEAARTTLADMRTNDGVDYFFIVDPQMRILMHPKRPVGTDMTDYKSDAGQYVYRDIKTAIDS
GDGFSYYDAPKPGKKEQLPKISYAKTFPAWNWVLVMGVYAEDIQVQAWGFTRTLTLIGGALVALVIGLCWLIASAMAAPL
RAASRTAEAIASGRFDNDIRVESRDETGQLMHSMQQMQNQLQRFNGEMQTMIRLQQGENIAHRIPEDFPGDYGTLAHGVN
TVVFEHLDAINEAMDVMSDYGRGDLRRDMRRLPGQRAALHQALDTVKENLSAINSDIARLADAAARGDFSARGDQSHYQF
AFAEMVQALNRLMQQADAGLDDVGRIMAAIADGDLSQRVESHYEGAFGRLADAANRTAIQLTGIVQGIQHSAEMINTAAG
EIASGNADLSTRTEHQAANLEETAASMEELTSTVRQNADNARQANQLVKGTGDVAESGGRVVQEVVSTMQAITQSSARIS
DIIGVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVATEVRALAQRSAGAAKEIKQLISDSVEKVAQGSELVQQAGSTM
TEVVSSVKRVTDIMAEITAASTEQSAGIEQVSTTVMQLDEMTQQNAALVEEATAAARSMEDQAADLTRAVAVFRLTSDAG
QQQARSAANAPATTKPAAARQAAHDHRLRA
>Mature_670_residues
MQHYADKVKAGELSLEQAKEAARTTLADMRTNDGVDYFFIVDPQMRILMHPKRPVGTDMTDYKSDAGQYVYRDIKTAIDS
GDGFSYYDAPKPGKKEQLPKISYAKTFPAWNWVLVMGVYAEDIQVQAWGFTRTLTLIGGALVALVIGLCWLIASAMAAPL
RAASRTAEAIASGRFDNDIRVESRDETGQLMHSMQQMQNQLQRFNGEMQTMIRLQQGENIAHRIPEDFPGDYGTLAHGVN
TVVFEHLDAINEAMDVMSDYGRGDLRRDMRRLPGQRAALHQALDTVKENLSAINSDIARLADAAARGDFSARGDQSHYQF
AFAEMVQALNRLMQQADAGLDDVGRIMAAIADGDLSQRVESHYEGAFGRLADAANRTAIQLTGIVQGIQHSAEMINTAAG
EIASGNADLSTRTEHQAANLEETAASMEELTSTVRQNADNARQANQLVKGTGDVAESGGRVVQEVVSTMQAITQSSARIS
DIIGVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVATEVRALAQRSAGAAKEIKQLISDSVEKVAQGSELVQQAGSTM
TEVVSSVKRVTDIMAEITAASTEQSAGIEQVSTTVMQLDEMTQQNAALVEEATAAARSMEDQAADLTRAVAVFRLTSDAG
QQQARSAANAPATTKPAAARQAAHDHRLRA

Specific function: Acts as a receptor for citrate and mediates taxis away from phenol. Also mediates an attractant response to metal-citrate complexes [H]

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI2367378, Length=341, Percent_Identity=56.3049853372434, Blast_Score=297, Evalue=1e-81,
Organism=Escherichia coli, GI1788195, Length=333, Percent_Identity=54.3543543543543, Blast_Score=291, Evalue=1e-79,
Organism=Escherichia coli, GI1787690, Length=298, Percent_Identity=56.0402684563758, Blast_Score=279, Evalue=3e-76,
Organism=Escherichia coli, GI1788194, Length=255, Percent_Identity=60.7843137254902, Blast_Score=277, Evalue=1e-75,
Organism=Escherichia coli, GI1789453, Length=232, Percent_Identity=44.3965517241379, Blast_Score=181, Evalue=9e-47,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR003122
- InterPro:   IPR004091
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 72240; Mature: 72240

Theoretical pI: Translated: 4.87; Mature: 4.87

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.1 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.1 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQHYADKVKAGELSLEQAKEAARTTLADMRTNDGVDYFFIVDPQMRILMHPKRPVGTDMT
CCCHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEECCCCCCCCCCH
DYKSDAGQYVYRDIKTAIDSGDGFSYYDAPKPGKKEQLPKISYAKTFPAWNWVLVMGVYA
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHCCCCCHHHHCCCCCCHHHEEEEHH
EDIQVQAWGFTRTLTLIGGALVALVIGLCWLIASAMAAPLRAASRTAEAIASGRFDNDIR
CCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCE
VESRDETGQLMHSMQQMQNQLQRFNGEMQTMIRLQQGENIAHRIPEDFPGDYGTLAHGVN
ECCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHCCCCCCCCHHHHHHHHH
TVVFEHLDAINEAMDVMSDYGRGDLRRDMRRLPGQRAALHQALDTVKENLSAINSDIARL
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
ADAAARGDFSARGDQSHYQFAFAEMVQALNRLMQQADAGLDDVGRIMAAIADGDLSQRVE
HHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHH
SHYEGAFGRLADAANRTAIQLTGIVQGIQHSAEMINTAAGEIASGNADLSTRTEHQAANL
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCH
EETAASMEELTSTVRQNADNARQANQLVKGTGDVAESGGRVVQEVVSTMQAITQSSARIS
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHH
DIIGVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVATEVRALAQRSAGAAKEIKQLIS
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHCCCHHHHHHHHHH
DSVEKVAQGSELVQQAGSTMTEVVSSVKRVTDIMAEITAASTEQSAGIEQVSTTVMQLDE
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHH
MTQQNAALVEEATAAARSMEDQAADLTRAVAVFRLTSDAGQQQARSAANAPATTKPAAAR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH
QAAHDHRLRA
HHHHHHCCCC
>Mature Secondary Structure
MQHYADKVKAGELSLEQAKEAARTTLADMRTNDGVDYFFIVDPQMRILMHPKRPVGTDMT
CCCHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEECCCCCCCCCCH
DYKSDAGQYVYRDIKTAIDSGDGFSYYDAPKPGKKEQLPKISYAKTFPAWNWVLVMGVYA
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHCCCCCHHHHCCCCCCHHHEEEEHH
EDIQVQAWGFTRTLTLIGGALVALVIGLCWLIASAMAAPLRAASRTAEAIASGRFDNDIR
CCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCE
VESRDETGQLMHSMQQMQNQLQRFNGEMQTMIRLQQGENIAHRIPEDFPGDYGTLAHGVN
ECCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHCCCCCCCCHHHHHHHHH
TVVFEHLDAINEAMDVMSDYGRGDLRRDMRRLPGQRAALHQALDTVKENLSAINSDIARL
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
ADAAARGDFSARGDQSHYQFAFAEMVQALNRLMQQADAGLDDVGRIMAAIADGDLSQRVE
HHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHH
SHYEGAFGRLADAANRTAIQLTGIVQGIQHSAEMINTAAGEIASGNADLSTRTEHQAANL
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCH
EETAASMEELTSTVRQNADNARQANQLVKGTGDVAESGGRVVQEVVSTMQAITQSSARIS
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHH
DIIGVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVATEVRALAQRSAGAAKEIKQLIS
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHCCCHHHHHHHHHH
DSVEKVAQGSELVQQAGSTMTEVVSSVKRVTDIMAEITAASTEQSAGIEQVSTTVMQLDE
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHH
MTQQNAALVEEATAAARSMEDQAADLTRAVAVFRLTSDAGQQQARSAANAPATTKPAAAR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH
QAAHDHRLRA
HHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8419927; 11677609 [H]