| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is yaiW [H]
Identifier: 21241363
GI number: 21241363
Start: 694897
End: 695988
Strand: Reverse
Name: yaiW [H]
Synonym: XAC0592
Alternate gene names: 21241363
Gene position: 695988-694897 (Counterclockwise)
Preceding gene: 21241366
Following gene: 77748537
Centisome position: 13.45
GC content: 68.86
Gene sequence:
>1092_bases GTGATCTCACACCTGCCCCGCGCGCTCACCGTGCTCGCCATCGCCTTGCTGTCGGCCTGCGCCACACAGGCCCCGCGTGC CCCGCAACGCTCGCCCGAGGCGGTCAAGACCGATATCGCGCGTCGCCTGCCGGCAACATTGCCCGACCGCGCCGGCTGGG CCAGCGATGTGTACGTGGCGCTGTCCTCGCAGGCGTTGGACACCAGCGCCGAGCACATCTGCGCAGTGCTGGCAGTGACC GAGCAGGAATCGAGCTACCAGGCCAACCCGGTCGTGCCCAACCTGGGCAAGATCTCGCGGGCAGAGATCGACCGCCGCGC CGGTGCGCATCACATTCCCGGCTTCATGGTCGATGCCGCCTTGCGTCTGCCGTCGCCGGATGGGCGCAGCTATGCCACGC GCATCGCTGCCGCGCGCACCGAAGAGGAACTGAGCCGCATCTTCGAAGACTTCACCGGCAGCGTGCCGTTGGGCGCGCGA CTGTTCGACGGGTTCAACCCGGTGCATACCGCCGGGCCGATGCAGGTGAGCATCGCCTTCGCCGAACAGCATGCGCAGCG CTACCCCTACCCGCCCGGCGATTCGATCCGCCACGAAGTCTTCAGCCGGCGCGGTGGGCTGTGGTTCGGTACGCAGCATC TGCTGGGTTATCCCGTCAGCTACGACGCGCTGCTGTACCGCTTCGCCGATTTCAACGCCGGCTGGTACGCCAGCCGCAAT GCCGCCTTCCAGGCCGCGCTGAGCAAGGCCAGCGGTATCGCGCTGGCCCTGGACGGCGACCTGCTCACGCCGGGCGCCAG CCTGGATGCGCCCGGCGGCACCGAGCGCGCCGCACGCAGCCTGGGCAGCCAGTTGGCGATGAGCGACCGCCAGCTCCGCC GCGCACTGGAGGACGGCAACACCGCAGATTTCGCGAACTCCGACCTGTACCGCCAGGTGTTCGCACTGGCAGAGCGCAGC GCCGGCAAGCCGCTGCCGCGTGCCGTGTTGCCCGGCATCACCCTGGAAAGCCCCAAGATCACCCGCACGCTCACCACCGC CTGGTTTGCGCAGCGGGTGAACGAGCGCTGGAAGCGCTGCATGAGCAAGTAA
Upstream 100 bases:
>100_bases CGGGCACAGCAGCCTTGCGCGCCAGCAGGTGAAGCTTCCACGGCGCGGCCGCGTAAACTGCCGCACGGCAGCTGCCGCCC CTCGATCTTCCGGAGACGCC
Downstream 100 bases:
>100_bases GCGCGCGGGCGGATCTGCCATCGCTGCAGCACTCGCGCAGGCGTGCCGTGCTTAGCGAACTGGTTCCGCCATGCGCGTCG CGCTACGCAGACACGCCTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 363; Mature: 363
Protein sequence:
>363_residues MISHLPRALTVLAIALLSACATQAPRAPQRSPEAVKTDIARRLPATLPDRAGWASDVYVALSSQALDTSAEHICAVLAVT EQESSYQANPVVPNLGKISRAEIDRRAGAHHIPGFMVDAALRLPSPDGRSYATRIAAARTEEELSRIFEDFTGSVPLGAR LFDGFNPVHTAGPMQVSIAFAEQHAQRYPYPPGDSIRHEVFSRRGGLWFGTQHLLGYPVSYDALLYRFADFNAGWYASRN AAFQAALSKASGIALALDGDLLTPGASLDAPGGTERAARSLGSQLAMSDRQLRRALEDGNTADFANSDLYRQVFALAERS AGKPLPRAVLPGITLESPKITRTLTTAWFAQRVNERWKRCMSK
Sequences:
>Translated_363_residues MISHLPRALTVLAIALLSACATQAPRAPQRSPEAVKTDIARRLPATLPDRAGWASDVYVALSSQALDTSAEHICAVLAVT EQESSYQANPVVPNLGKISRAEIDRRAGAHHIPGFMVDAALRLPSPDGRSYATRIAAARTEEELSRIFEDFTGSVPLGAR LFDGFNPVHTAGPMQVSIAFAEQHAQRYPYPPGDSIRHEVFSRRGGLWFGTQHLLGYPVSYDALLYRFADFNAGWYASRN AAFQAALSKASGIALALDGDLLTPGASLDAPGGTERAARSLGSQLAMSDRQLRRALEDGNTADFANSDLYRQVFALAERS AGKPLPRAVLPGITLESPKITRTLTTAWFAQRVNERWKRCMSK >Mature_363_residues MISHLPRALTVLAIALLSACATQAPRAPQRSPEAVKTDIARRLPATLPDRAGWASDVYVALSSQALDTSAEHICAVLAVT EQESSYQANPVVPNLGKISRAEIDRRAGAHHIPGFMVDAALRLPSPDGRSYATRIAAARTEEELSRIFEDFTGSVPLGAR LFDGFNPVHTAGPMQVSIAFAEQHAQRYPYPPGDSIRHEVFSRRGGLWFGTQHLLGYPVSYDALLYRFADFNAGWYASRN AAFQAALSKASGIALALDGDLLTPGASLDAPGGTERAARSLGSQLAMSDRQLRRALEDGNTADFANSDLYRQVFALAERS AGKPLPRAVLPGITLESPKITRTLTTAWFAQRVNERWKRCMSK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1786576, Length=346, Percent_Identity=55.7803468208092, Blast_Score=405, Evalue=1e-114,
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011673 - ProDom: PD041438 [H]
Pfam domain/function: PF07759 DUF1615 [H]
EC number: NA
Molecular weight: Translated: 39369; Mature: 39369
Theoretical pI: Translated: 9.30; Mature: 9.30
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MISHLPRALTVLAIALLSACATQAPRAPQRSPEAVKTDIARRLPATLPDRAGWASDVYVA CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHEEE LSSQALDTSAEHICAVLAVTEQESSYQANPVVPNLGKISRAEIDRRAGAHHIPGFMVDAA ECCHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHH LRLPSPDGRSYATRIAAARTEEELSRIFEDFTGSVPLGARLFDGFNPVHTAGPMQVSIAF HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCCCEEEEHH AEQHAQRYPYPPGDSIRHEVFSRRGGLWFGTQHLLGYPVSYDALLYRFADFNAGWYASRN HHHHHHCCCCCCCHHHHHHHHHHCCCCEECCHHHHCCCCHHHHHHHHHHCCCCCCCCCCH AAFQAALSKASGIALALDGDLLTPGASLDAPGGTERAARSLGSQLAMSDRQLRRALEDGN HHHHHHHHHCCCEEEEECCCEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC TADFANSDLYRQVFALAERSAGKPLPRAVLPGITLESPKITRTLTTAWFAQRVNERWKRC CCCCCCHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH MSK HCC >Mature Secondary Structure MISHLPRALTVLAIALLSACATQAPRAPQRSPEAVKTDIARRLPATLPDRAGWASDVYVA CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHEEE LSSQALDTSAEHICAVLAVTEQESSYQANPVVPNLGKISRAEIDRRAGAHHIPGFMVDAA ECCHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHH LRLPSPDGRSYATRIAAARTEEELSRIFEDFTGSVPLGARLFDGFNPVHTAGPMQVSIAF HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCCCEEEEHH AEQHAQRYPYPPGDSIRHEVFSRRGGLWFGTQHLLGYPVSYDALLYRFADFNAGWYASRN HHHHHHCCCCCCCHHHHHHHHHHCCCCEECCHHHHCCCCHHHHHHHHHHCCCCCCCCCCH AAFQAALSKASGIALALDGDLLTPGASLDAPGGTERAARSLGSQLAMSDRQLRRALEDGN HHHHHHHHHCCCEEEEECCCEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC TADFANSDLYRQVFALAERSAGKPLPRAVLPGITLESPKITRTLTTAWFAQRVNERWKRC CCCCCCHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH MSK HCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]