| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21241289
Identifier: 21241289
GI number: 21241289
Start: 609014
End: 610510
Strand: Direct
Name: 21241289
Synonym: XAC0518
Alternate gene names: NA
Gene position: 609014-610510 (Clockwise)
Preceding gene: 21241288
Following gene: 21241290
Centisome position: 11.77
GC content: 69.47
Gene sequence:
>1497_bases ATGAGCAACGCACCCGATTCCGCTCAGCGCGAACCGCAACACGCCACGCCAGCGCAGCGGGCGCTGTGGCAGCGGCTGCA GGGCTACCGCTTTGGCCAGGACGACGCGGCGTTTGCGGCCTTCGTTCGGCGCGTGGCCAAGCAGGCACAGTGCAGCACCG CGCAAGCGCAGGCGTTGGTGGAGGAGTACCGACGGTTCTGTTTTCTTGCCTGCACCGACACCCACGAGGTCACCCCCAGC CCGTTGGTCGACCAGGTCTGGCATACGCATCTGACCGACACCCGCGAGTACTGGCAGCAGTTCTGCCCGCACGTGCTGCA GACCACCCTGCATCATCAACCCGGACGCGGCGATGCCGGCGAACAGGCGCGGTTCCAGGCGCAGTACCGCCAGACGCTGG AGCGTTACCGCACGCAGTTCGGCGAGCCGCCGGCGCAATGGTGGCCTGCGGCGCGACCGCAGCAATCGACGCTGGATCCG CTCCACGAGGACACTGCCGAACAGACCTTGCAGGCCTTGCGTGGAGCGCCGCAGTTGTCTGGGCCGCAGCGCGGTGTGCC GTATGCCGTCTTCGCGTGGGCGATCATCGCGGTGGTGGTGGGCATGGCCTGTCGCGCGGCCAATGGCGGGGGGCTGTCGC CGCTGCACTGGCGCGGTGTCTATTTCCTGCCGCTGTTCATCGCGCTGATCGGTCTGGCCTGGTCGATGGCGGCATGGTTG CGACGGGTGCTGCGACGCGGTCGCACCGCAGCAGCACTGGATGCCAGCGAGCTTGCGTATCTGGCCGGCGGTGCCGATCG CGTGGCCGACCTGTGGTTCACCGAGTTACTGGTGCGCAATGCGGTGTATCTGGAGCGCGACGCAACCGAACCGGCACGCC ACTGGGTGCGCTGCCACCGGCAGATTGCGGTTCCGCCTGCGCTGGAGCCGGCACTGGAAGCGGTGCGCACCACCGAAGAC CCGGTGTGGGCCTTGCGCGCGTTGCGCGCGCTGGCCGCACCGCTGGAGCAGCGCTTGATCGACAAGGGCCTGTGGCTGAG CCAGGCGCAGGCACGCGCGGTGCGTCTGGCATGTACCGTGCCGGTGGCGCTGGTATGGGGGCTTGGCCTGTGCAAGCTGG TCATCGGCGTGCAGGGCAACCATCCGGTGGGCTATCTGCTGTGTCTGATGGTGCTGACCACATTGCTGGTGCTGGGCTTT GCGCTGGTGCGCGTGCGGCGCACGCTCGGCGGCGAGGCCCGCCTTGCGACACTGCGTCACACGCGGCGACGCGATGCGGC GCGCACCGGCGGTGATCCAGGCGAGGCAGTGGCGCTGTACGGCACCGCGGCACTGATCGGGACCGCTTGGGCCGACTACC ACAGCCTGCGTGCGCCGCATGGCCACGCCGGTGGCAGCGGCAGCAGCTGCGGCGGGAGCGGCGGCGACAGCGGCGGCGAT GGTGATAACAGCGATGGTGGCGGCGGCTGTGGCGGCTGCGGTGGAGGAGGCGACTGA
Upstream 100 bases:
>100_bases CGCGCTGCGCCGGCATGCGCCGCCTGCTGCGTTGGCAGCTGGCAAGCGTGGTGGTGCAACTGCTGTTGGTGGCTGCGGCG CTCGCTCTCGGGATCTTCAG
Downstream 100 bases:
>100_bases TGCAACACGGACAGCAACAGCGGCAGCTGCAATGGGCGCGCGTGCTGCGCGGGCGTGGCGCCACGCCCAATGGCGTGTCG TGGGTAAGCATCGCGTTTGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 498; Mature: 497
Protein sequence:
>498_residues MSNAPDSAQREPQHATPAQRALWQRLQGYRFGQDDAAFAAFVRRVAKQAQCSTAQAQALVEEYRRFCFLACTDTHEVTPS PLVDQVWHTHLTDTREYWQQFCPHVLQTTLHHQPGRGDAGEQARFQAQYRQTLERYRTQFGEPPAQWWPAARPQQSTLDP LHEDTAEQTLQALRGAPQLSGPQRGVPYAVFAWAIIAVVVGMACRAANGGGLSPLHWRGVYFLPLFIALIGLAWSMAAWL RRVLRRGRTAAALDASELAYLAGGADRVADLWFTELLVRNAVYLERDATEPARHWVRCHRQIAVPPALEPALEAVRTTED PVWALRALRALAAPLEQRLIDKGLWLSQAQARAVRLACTVPVALVWGLGLCKLVIGVQGNHPVGYLLCLMVLTTLLVLGF ALVRVRRTLGGEARLATLRHTRRRDAARTGGDPGEAVALYGTAALIGTAWADYHSLRAPHGHAGGSGSSCGGSGGDSGGD GDNSDGGGGCGGCGGGGD
Sequences:
>Translated_498_residues MSNAPDSAQREPQHATPAQRALWQRLQGYRFGQDDAAFAAFVRRVAKQAQCSTAQAQALVEEYRRFCFLACTDTHEVTPS PLVDQVWHTHLTDTREYWQQFCPHVLQTTLHHQPGRGDAGEQARFQAQYRQTLERYRTQFGEPPAQWWPAARPQQSTLDP LHEDTAEQTLQALRGAPQLSGPQRGVPYAVFAWAIIAVVVGMACRAANGGGLSPLHWRGVYFLPLFIALIGLAWSMAAWL RRVLRRGRTAAALDASELAYLAGGADRVADLWFTELLVRNAVYLERDATEPARHWVRCHRQIAVPPALEPALEAVRTTED PVWALRALRALAAPLEQRLIDKGLWLSQAQARAVRLACTVPVALVWGLGLCKLVIGVQGNHPVGYLLCLMVLTTLLVLGF ALVRVRRTLGGEARLATLRHTRRRDAARTGGDPGEAVALYGTAALIGTAWADYHSLRAPHGHAGGSGSSCGGSGGDSGGD GDNSDGGGGCGGCGGGGD >Mature_497_residues SNAPDSAQREPQHATPAQRALWQRLQGYRFGQDDAAFAAFVRRVAKQAQCSTAQAQALVEEYRRFCFLACTDTHEVTPSP LVDQVWHTHLTDTREYWQQFCPHVLQTTLHHQPGRGDAGEQARFQAQYRQTLERYRTQFGEPPAQWWPAARPQQSTLDPL HEDTAEQTLQALRGAPQLSGPQRGVPYAVFAWAIIAVVVGMACRAANGGGLSPLHWRGVYFLPLFIALIGLAWSMAAWLR RVLRRGRTAAALDASELAYLAGGADRVADLWFTELLVRNAVYLERDATEPARHWVRCHRQIAVPPALEPALEAVRTTEDP VWALRALRALAAPLEQRLIDKGLWLSQAQARAVRLACTVPVALVWGLGLCKLVIGVQGNHPVGYLLCLMVLTTLLVLGFA LVRVRRTLGGEARLATLRHTRRRDAARTGGDPGEAVALYGTAALIGTAWADYHSLRAPHGHAGGSGSSCGGSGGDSGGDG DNSDGGGGCGGCGGGGD
Specific function: Unknown
COG id: COG4278
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53983; Mature: 53852
Theoretical pI: Translated: 8.43; Mature: 8.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNAPDSAQREPQHATPAQRALWQRLQGYRFGQDDAAFAAFVRRVAKQAQCSTAQAQALV CCCCCCCHHCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH EEYRRFCFLACTDTHEVTPSPLVDQVWHTHLTDTREYWQQFCPHVLQTTLHHQPGRGDAG HHHHHHEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC EQARFQAQYRQTLERYRTQFGEPPAQWWPAARPQQSTLDPLHEDTAEQTLQALRGAPQLS HHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCHHCCHHHHHHHHHHHHHHHCCCCCC GPQRGVPYAVFAWAIIAVVVGMACRAANGGGLSPLHWRGVYFLPLFIALIGLAWSMAAWL CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH RRVLRRGRTAAALDASELAYLAGGADRVADLWFTELLVRNAVYLERDATEPARHWVRCHR HHHHHCCCCCHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH QIAVPPALEPALEAVRTTEDPVWALRALRALAAPLEQRLIDKGLWLSQAQARAVRLACTV HHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH PVALVWGLGLCKLVIGVQGNHPVGYLLCLMVLTTLLVLGFALVRVRRTLGGEARLATLRH HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH TRRRDAARTGGDPGEAVALYGTAALIGTAWADYHSLRAPHGHAGGSGSSCGGSGGDSGGD HHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC GDNSDGGGGCGGCGGGGD CCCCCCCCCCCCCCCCCC >Mature Secondary Structure SNAPDSAQREPQHATPAQRALWQRLQGYRFGQDDAAFAAFVRRVAKQAQCSTAQAQALV CCCCCCHHCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH EEYRRFCFLACTDTHEVTPSPLVDQVWHTHLTDTREYWQQFCPHVLQTTLHHQPGRGDAG HHHHHHEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC EQARFQAQYRQTLERYRTQFGEPPAQWWPAARPQQSTLDPLHEDTAEQTLQALRGAPQLS HHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCHHCCHHHHHHHHHHHHHHHCCCCCC GPQRGVPYAVFAWAIIAVVVGMACRAANGGGLSPLHWRGVYFLPLFIALIGLAWSMAAWL CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH RRVLRRGRTAAALDASELAYLAGGADRVADLWFTELLVRNAVYLERDATEPARHWVRCHR HHHHHCCCCCHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH QIAVPPALEPALEAVRTTEDPVWALRALRALAAPLEQRLIDKGLWLSQAQARAVRLACTV HHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH PVALVWGLGLCKLVIGVQGNHPVGYLLCLMVLTTLLVLGFALVRVRRTLGGEARLATLRH HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH TRRRDAARTGGDPGEAVALYGTAALIGTAWADYHSLRAPHGHAGGSGSSCGGSGGDSGGD HHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC GDNSDGGGGCGGCGGGGD CCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA