Click here to switch to the map view.

The map label for this gene is hpa2 [H]

Identifier: 21241190

GI number: 21241190

Start: 487918

End: 488334

Strand: Direct

Name: hpa2 [H]

Synonym: XAC0417

Alternate gene names: 21241190

Gene position: 487918-488334 (Clockwise)

Preceding gene: 21241188

Following gene: 21241193

Centisome position: 9.43

GC content: 58.99

Gene sequence:

>417_bases
TTGTTTGCAGCAGCACTGGCATGCGCGGCGCCTTTCGCGCGCGCGGATTGCTTCGAGGAGGCCGCCGGATATCAGCACGT
CAACCCTTGGGTGCTGCGTGCCATTGCCTGGCAGGAATCGCGCGGTCGTGCCGACGCAGTCCATCGCAACAACAACGGCA
CGGTTGATTACGGGAAGATGCAGATCAACTCCATCCATCTGCGGCGGTTATCCAGCTACGGAATCTCCAGGGACGCATTG
ATGCATCCGTGCATCAGTGTGTATGTGGCAGCGTGGCGGTTGCGCGAGATGACCAACAAATACGGAAATACCTGGGCTGC
AGTAGGGGCCTACCATTCCGAAACGCCGGGGGAACGCGACAAGTATGCGCATGCCATTCACTCGATTCTGCTCAGGCGCG
GTGTGATTGCCGAATAG

Upstream 100 bases:

>100_bases
TTTGCAGTTGGGGTTCTCGTCCGGGCCTTCGCCAAAACGACGCGTGCGCGCGAAAAGGTCAGGATGTGGTCGTCGGGCAG
GAGCTGGTCCGCAGCGTATT

Downstream 100 bases:

>100_bases
CGCGAAGGCCACTGCAGGCGTGCGTAGATAGGTGCAGCCCAGGTGTGTGGAGAGGCCCGGGCATGAGGTGGCGCAGGATC
GTGCAAGGCGGCGACACGCT

Product: Hpa2 protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 138; Mature: 138

Protein sequence:

>138_residues
MFAAALACAAPFARADCFEEAAGYQHVNPWVLRAIAWQESRGRADAVHRNNNGTVDYGKMQINSIHLRRLSSYGISRDAL
MHPCISVYVAAWRLREMTNKYGNTWAAVGAYHSETPGERDKYAHAIHSILLRRGVIAE

Sequences:

>Translated_138_residues
MFAAALACAAPFARADCFEEAAGYQHVNPWVLRAIAWQESRGRADAVHRNNNGTVDYGKMQINSIHLRRLSSYGISRDAL
MHPCISVYVAAWRLREMTNKYGNTWAAVGAYHSETPGERDKYAHAIHSILLRRGVIAE
>Mature_138_residues
MFAAALACAAPFARADCFEEAAGYQHVNPWVLRAIAWQESRGRADAVHRNNNGTVDYGKMQINSIHLRRLSSYGISRDAL
MHPCISVYVAAWRLREMTNKYGNTWAAVGAYHSETPGERDKYAHAIHSILLRRGVIAE

Specific function: Unknown

COG id: COG0741

COG function: function code M; Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the iagB/ipgF/P19 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008258 [H]

Pfam domain/function: PF01464 SLT [H]

EC number: NA

Molecular weight: Translated: 15460; Mature: 15460

Theoretical pI: Translated: 9.15; Mature: 9.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFAAALACAAPFARADCFEEAAGYQHVNPWVLRAIAWQESRGRADAVHRNNNGTVDYGKM
CCHHHHHHHCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCEEECCCCCEEECCE
QINSIHLRRLSSYGISRDALMHPCISVYVAAWRLREMTNKYGNTWAAVGAYHSETPGERD
EEHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCHH
KYAHAIHSILLRRGVIAE
HHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MFAAALACAAPFARADCFEEAAGYQHVNPWVLRAIAWQESRGRADAVHRNNNGTVDYGKM
CCHHHHHHHCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCEEECCCCCEEECCE
QINSIHLRRLSSYGISRDALMHPCISVYVAAWRLREMTNKYGNTWAAVGAYHSETPGERD
EEHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCHH
KYAHAIHSILLRRGVIAE
HHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8478058; 11115111; 11292750; 12384590 [H]