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The map label for this gene is hrcC [H]

Identifier: 21241188

GI number: 21241188

Start: 484443

End: 486266

Strand: Direct

Name: hrcC [H]

Synonym: XAC0415

Alternate gene names: 21241188

Gene position: 484443-486266 (Clockwise)

Preceding gene: 21241187

Following gene: 21241190

Centisome position: 9.36

GC content: 64.25

Gene sequence:

>1824_bases
ATGGCTCCTGCCTGTACCACAGTCCACCGCCGACGTGCTCCATTGGCCGCCGTCCTGATGCTCAGCCTGCTGCCAGTGTT
GTCGCCACATGCCGACGCCGCCCAGGTCCCGTGGCATTCGCGCACGTTCAAATACGTCGCCGACAACAAGGATCTCAAAG
AGGTGCTGCGTGATTTGTCCGCCAGCCAGTCCATCGCCACCTGGATCTCGCCAGAAGTCACCGGTACGCTGAGCGGCAAA
TTCGAAACATCTCCGCAGAAATTCCTCGACGACCTGGCGGCCACCTACGGCTTCGTCTGGTACTACGATGGCGCCGTGCT
CAGGATCTGGGGCGCAAACGAATCCAAGAGCGCGACCTTGAGTCTGGGGACCGCATCGACGAAGTCACTGCGCGACGCGC
TTGCGCGCATGCGCCTGGACGATCCGCGCTTTCCGGTGCGTTACGACGAGACCGCGCATGTGGCAGTGGTCTCCGGACCG
CCAGGGTATGTGGATACCGTTTCGGCGATTGCCAAGCAGGTCGAGCAGGGCGCGCGTCAGCGCGATGCCACCGAAGTGCA
GGTGTTTCAGCTGCATTATGCGCAAGCGGCCGACCACACGACGCGCATCGGCGGTCAGGACGTGCAGATTCCAGGCATGG
CCAGTCTGTTGCGCAGCATGTACGGCGCACGCGGCGCACCGGTCGCGGCAATACCGGGGCCTGGCGCCAACTTTGGCCGG
GTACAGCCGATCGGCGGCGGGTCCTCCAACACATTCGGCAATGCCGCACAGGGTCAAGGCGGCGGAGCCAGCGGCATCCT
GGGGCTGCCTTCGTCCTGGTTCGGCGGGGCCTCGTCGTCCGATCGCGTACCGGTCAGCCCGCCGTTGCCCGGCAGTGGAA
CTGCTGCGACTGCGGGCTCGCCCGCCAGCGTCTGGCCGGAGCTCAGCAAGGGACGGCGCGACGAGTCCACTCCGATCGAC
GCCGGTGGCGGCGCGGAGCTGGCCTCCGATGCGCCGGTGATCGAAGCCGATCCGCGCACCAACACCATCCTGATCCGCGA
TCGACCCGAGCGGATGCAGAGCTATGGCACCCTGATCCAACAGTTGGATAACCGGCCCAAGTTGCTGCAGATCGATGCCA
CCATCATCGAGATCCGCGATGGCGCCATGCAGGATCTCGGTGTCGACTGGCGCTTCCACAGCCAGCACACGGACATACAG
ACCGGCAACGGCAGTGGCGGTCAGTTGGGCTTCAACGGCGCATTGAGCGGCGCTGCCACCGATGGCGCGACCACGCCGGC
TGGGGGCACCTTGACGGCCGTGCTGGGAGACGCCGGGCGCTACCTGATGACGCGCGTGTCGGCGTTGGAGACGACCAACA
AGGCCAAGATCGTGTCTTCGCCCCAGGTTGCGACGCTGGACAACGTCGAGGCGGTCATGGACCACAAGCAACAGGCATTC
GTCCGGGTCAGCGGATACGCATCGGCCGATCTTTATAACCTCTCCGCCGGGGTGTCGTTGCGGGTATTGCCCAGCGTGGT
GCCAGGCTCGCCGAACGGTCAGATGCGGCTGGATGTGCGTATTGAGGATGGCCAGCTTGGATCCAACACCGTGGACGGCA
TCCCGGTCATTACCTCCAGCGAGATCACGACCCAGGCCTTCGTCAATGAAGGGCAGAGCCTGCTGATTGCAGGATACGCC
TACGATGCCGACGAGACCGATCTGAATGCGGTGCCGGGCCTGTCGAAGATTCCGTTGCTCGGTAACCTGTTCAAGCACCG
CCAAAAAAGTGGGTCGCGCATGCAACGGCTGTTTCTGCTGACCCCGCATGTGGTGTCACCCTGA

Upstream 100 bases:

>100_bases
GAGAGCCGCGTCGCACTGATCTTTATTGAGACATTCCCGGCTTTGCACTTCCTACACTGATCGCTACCGACTTCTTCACT
TGCCTAGCAGAGGGAACGCC

Downstream 100 bases:

>100_bases
TGGATGGTGTGCGAAAAGCCATCGGTGGCAGCTGCGAGTGCCTGATACTCGGTGAATACCAAAGCCCGAATAAGGACGGG
ATTGTTTGAGAAATCATCAG

Product: HrcC protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 607; Mature: 606

Protein sequence:

>607_residues
MAPACTTVHRRRAPLAAVLMLSLLPVLSPHADAAQVPWHSRTFKYVADNKDLKEVLRDLSASQSIATWISPEVTGTLSGK
FETSPQKFLDDLAATYGFVWYYDGAVLRIWGANESKSATLSLGTASTKSLRDALARMRLDDPRFPVRYDETAHVAVVSGP
PGYVDTVSAIAKQVEQGARQRDATEVQVFQLHYAQAADHTTRIGGQDVQIPGMASLLRSMYGARGAPVAAIPGPGANFGR
VQPIGGGSSNTFGNAAQGQGGGASGILGLPSSWFGGASSSDRVPVSPPLPGSGTAATAGSPASVWPELSKGRRDESTPID
AGGGAELASDAPVIEADPRTNTILIRDRPERMQSYGTLIQQLDNRPKLLQIDATIIEIRDGAMQDLGVDWRFHSQHTDIQ
TGNGSGGQLGFNGALSGAATDGATTPAGGTLTAVLGDAGRYLMTRVSALETTNKAKIVSSPQVATLDNVEAVMDHKQQAF
VRVSGYASADLYNLSAGVSLRVLPSVVPGSPNGQMRLDVRIEDGQLGSNTVDGIPVITSSEITTQAFVNEGQSLLIAGYA
YDADETDLNAVPGLSKIPLLGNLFKHRQKSGSRMQRLFLLTPHVVSP

Sequences:

>Translated_607_residues
MAPACTTVHRRRAPLAAVLMLSLLPVLSPHADAAQVPWHSRTFKYVADNKDLKEVLRDLSASQSIATWISPEVTGTLSGK
FETSPQKFLDDLAATYGFVWYYDGAVLRIWGANESKSATLSLGTASTKSLRDALARMRLDDPRFPVRYDETAHVAVVSGP
PGYVDTVSAIAKQVEQGARQRDATEVQVFQLHYAQAADHTTRIGGQDVQIPGMASLLRSMYGARGAPVAAIPGPGANFGR
VQPIGGGSSNTFGNAAQGQGGGASGILGLPSSWFGGASSSDRVPVSPPLPGSGTAATAGSPASVWPELSKGRRDESTPID
AGGGAELASDAPVIEADPRTNTILIRDRPERMQSYGTLIQQLDNRPKLLQIDATIIEIRDGAMQDLGVDWRFHSQHTDIQ
TGNGSGGQLGFNGALSGAATDGATTPAGGTLTAVLGDAGRYLMTRVSALETTNKAKIVSSPQVATLDNVEAVMDHKQQAF
VRVSGYASADLYNLSAGVSLRVLPSVVPGSPNGQMRLDVRIEDGQLGSNTVDGIPVITSSEITTQAFVNEGQSLLIAGYA
YDADETDLNAVPGLSKIPLLGNLFKHRQKSGSRMQRLFLLTPHVVSP
>Mature_606_residues
APACTTVHRRRAPLAAVLMLSLLPVLSPHADAAQVPWHSRTFKYVADNKDLKEVLRDLSASQSIATWISPEVTGTLSGKF
ETSPQKFLDDLAATYGFVWYYDGAVLRIWGANESKSATLSLGTASTKSLRDALARMRLDDPRFPVRYDETAHVAVVSGPP
GYVDTVSAIAKQVEQGARQRDATEVQVFQLHYAQAADHTTRIGGQDVQIPGMASLLRSMYGARGAPVAAIPGPGANFGRV
QPIGGGSSNTFGNAAQGQGGGASGILGLPSSWFGGASSSDRVPVSPPLPGSGTAATAGSPASVWPELSKGRRDESTPIDA
GGGAELASDAPVIEADPRTNTILIRDRPERMQSYGTLIQQLDNRPKLLQIDATIIEIRDGAMQDLGVDWRFHSQHTDIQT
GNGSGGQLGFNGALSGAATDGATTPAGGTLTAVLGDAGRYLMTRVSALETTNKAKIVSSPQVATLDNVEAVMDHKQQAFV
RVSGYASADLYNLSAGVSLRVLPSVVPGSPNGQMRLDVRIEDGQLGSNTVDGIPVITSSEITTQAFVNEGQSLLIAGYAY
DADETDLNAVPGLSKIPLLGNLFKHRQKSGSRMQRLFLLTPHVVSP

Specific function: Necessary for both basic pathogenicity and the induction of the hypersensitive response in resistant plants. Could be a part of a specific transport apparatus or a secretion apparatus that is required for pathogenicity. Hrp proteins may form a complex (tu

COG id: COG1450

COG function: function code NU; Type II secretory pathway, component PulD

Gene ontology:

Cell location: Cell outer membrane; Peripheral membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GSP D family [H]

Homologues:

Organism=Escherichia coli, GI1789793, Length=302, Percent_Identity=27.1523178807947, Blast_Score=88, Evalue=2e-18,
Organism=Escherichia coli, GI87082242, Length=295, Percent_Identity=25.4237288135593, Blast_Score=77, Evalue=5e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005644
- InterPro:   IPR004846
- InterPro:   IPR004845
- InterPro:   IPR003522 [H]

Pfam domain/function: PF00263 Secretin; PF03958 Secretin_N [H]

EC number: NA

Molecular weight: Translated: 63945; Mature: 63813

Theoretical pI: Translated: 6.60; Mature: 6.60

Prosite motif: PS00875 T2SP_D

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAPACTTVHRRRAPLAAVLMLSLLPVLSPHADAAQVPWHSRTFKYVADNKDLKEVLRDLS
CCCCHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHC
ASQSIATWISPEVTGTLSGKFETSPQKFLDDLAATYGFVWYYDGAVLRIWGANESKSATL
CCCHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHCEEEEECCEEEEEECCCCCCCEEE
SLGTASTKSLRDALARMRLDDPRFPVRYDETAHVAVVSGPPGYVDTVSAIAKQVEQGARQ
EECCCCHHHHHHHHHHHCCCCCCCCEEECCCEEEEEEECCCCHHHHHHHHHHHHHHHHHH
RDATEVQVFQLHYAQAADHTTRIGGQDVQIPGMASLLRSMYGARGAPVAAIPGPGANFGR
CCCCEEEEEEEEHHHHCCCHHCCCCCCEECCCHHHHHHHHHCCCCCCEEECCCCCCCCCE
VQPIGGGSSNTFGNAAQGQGGGASGILGLPSSWFGGASSSDRVPVSPPLPGSGTAATAGS
EEECCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PASVWPELSKGRRDESTPIDAGGGAELASDAPVIEADPRTNTILIRDRPERMQSYGTLIQ
CHHHCHHHHCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCEEEEECCHHHHHHHHHHHH
QLDNRPKLLQIDATIIEIRDGAMQDLGVDWRFHSQHTDIQTGNGSGGQLGFNGALSGAAT
HHCCCCCEEEEEEEEEEECCCCHHHCCCCEEECCCCCCEECCCCCCCCCCCCCCCCCCCC
DGATTPAGGTLTAVLGDAGRYLMTRVSALETTNKAKIVSSPQVATLDNVEAVMDHKQQAF
CCCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCEEEECCCCEEECCCHHHHHCCCHHEE
VRVSGYASADLYNLSAGVSLRVLPSVVPGSPNGQMRLDVRIEDGQLGSNTVDGIPVITSS
EEEECCCCCCEEEECCCCEEEEECCCCCCCCCCCEEEEEEEECCCCCCCCCCCEEEEECC
EITTQAFVNEGQSLLIAGYAYDADETDLNAVPGLSKIPLLGNLFKHRQKSGSRMQRLFLL
CHHHHHHHCCCCEEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCHHHHEEEEEE
TPHVVSP
CCCCCCC
>Mature Secondary Structure 
APACTTVHRRRAPLAAVLMLSLLPVLSPHADAAQVPWHSRTFKYVADNKDLKEVLRDLS
CCCHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHC
ASQSIATWISPEVTGTLSGKFETSPQKFLDDLAATYGFVWYYDGAVLRIWGANESKSATL
CCCHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHCEEEEECCEEEEEECCCCCCCEEE
SLGTASTKSLRDALARMRLDDPRFPVRYDETAHVAVVSGPPGYVDTVSAIAKQVEQGARQ
EECCCCHHHHHHHHHHHCCCCCCCCEEECCCEEEEEEECCCCHHHHHHHHHHHHHHHHHH
RDATEVQVFQLHYAQAADHTTRIGGQDVQIPGMASLLRSMYGARGAPVAAIPGPGANFGR
CCCCEEEEEEEEHHHHCCCHHCCCCCCEECCCHHHHHHHHHCCCCCCEEECCCCCCCCCE
VQPIGGGSSNTFGNAAQGQGGGASGILGLPSSWFGGASSSDRVPVSPPLPGSGTAATAGS
EEECCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PASVWPELSKGRRDESTPIDAGGGAELASDAPVIEADPRTNTILIRDRPERMQSYGTLIQ
CHHHCHHHHCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCEEEEECCHHHHHHHHHHHH
QLDNRPKLLQIDATIIEIRDGAMQDLGVDWRFHSQHTDIQTGNGSGGQLGFNGALSGAAT
HHCCCCCEEEEEEEEEEECCCCHHHCCCCEEECCCCCCEECCCCCCCCCCCCCCCCCCCC
DGATTPAGGTLTAVLGDAGRYLMTRVSALETTNKAKIVSSPQVATLDNVEAVMDHKQQAF
CCCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCEEEECCCCEEECCCHHHHHCCCHHEE
VRVSGYASADLYNLSAGVSLRVLPSVVPGSPNGQMRLDVRIEDGQLGSNTVDGIPVITSS
EEEECCCCCCEEEECCCCEEEEECCCCCCCCCCCEEEEEEEECCCCCCCCCCCEEEEECC
EITTQAFVNEGQSLLIAGYAYDADETDLNAVPGLSKIPLLGNLFKHRQKSGSRMQRLFLL
CHHHHHHHCCCCEEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCHHHHEEEEEE
TPHVVSP
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1472717 [H]