| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is frp [H]
Identifier: 21241095
GI number: 21241095
Start: 382489
End: 383586
Strand: Direct
Name: frp [H]
Synonym: XAC0321
Alternate gene names: 21241095
Gene position: 382489-383586 (Clockwise)
Preceding gene: 77748522
Following gene: 21241096
Centisome position: 7.39
GC content: 65.66
Gene sequence:
>1098_bases TTGAGCCAGTTGTTCTCCCCCATCGCCTTCGGTCCGCTTGCGCTCGCCAACCGGATTGTCATTGCGCCGATGTGCCAGTA CTCGGCACAGAACGGCCGCGCCAGCGATTGGCACCGCATCCATCTGGGCACGTTGTCGCAATCCGGCGCCGGCTTGCTGA TTCTCGAAGCGGCCGCAGTGGTACCGGAAGGGCGCATCAGTTACGCCGATCTTGGGTTGTACGATGATGCGACCGAGCAG GCGCTGGCCGAGGTACTGCAATCGGTACGACGCTGGTCGCCGATGCCGATCGGCATCCAGCTGGCGCATGCCGGGCGCAA GGCCTCGACCGATCTGCCGTGGAAAGGCGGCGAGGCCATCGCGCCCGACCACGCGCATGGCTGGCAGACCGTGTCTGCAT CGGCGCTGCCGTTCCGCCAGGGACAGCCGGCGCCGCAGACACTGGATGAGGCGGGAATCGATGCCGTGGTGGACGCCTTC GTCGCATCGGCAACGCGTGCCGAACGGCTGGGCCTGGAGTTGATCGAACTGCACGCCGCGCATGGTTATCTGATGCATCA ATTCCTGTCGCCGCTGAGTAACCAGCGCAGCGATGCATATGGCGGTTCGCTGGAAAATCGCATGCGGCTGACGCTGCGCA TCTTCGATGCGGTGCGTGCGGCAGTGTCGGAAAAAATCGCCGTTGGCGTGCGTATCTCGGCCACCGACTGGGTCGAAGGC GGGTGGGATGTGCAGCAGAGCATCGCCTTGTCGCAGGCGCTGGATGCACGCGGTGCGCATTACATCCATGTCTCTAGCGG CGGGCTCGATCCACGCCAGCAGATTCCGCTGCAGGCGGGCTATCAGATTCCGTTCGCGCAGGAGATCCGCGCGCAGGTGA ACACGCCGGTGATTGGCGTAGGCTTGATCACCGAGCCGGCGCAGGCCGAGGCGATTCTGCAAGAAGGCCAGGCCGATGCG ATCGCGCTGGCGCGTGGCATCCTGTACGACCCGCGCTGGCCGTGGCATGCCGCCGCGGCGCTGGGCGCCTCGGTCACTCC GGCACCGCAATACCTGCGTTGCGAACCGCGCGATGCGCGGGGCGTGTTCGCCAACTGA
Upstream 100 bases:
>100_bases CCAGTGCACGCTCTGCATGACGCAGTGATCCATCGCAGCGGTTGTGCCGGCGCGCGCGGCGCAGTGCAATAAGCACCCCA TGTCAGCTGTGGATGCCGCC
Downstream 100 bases:
>100_bases TTTGCACCTGACGTCATACCGAACAAGGACACCGCATGCCGATAGGATTTCTGGGCTTGGGCACGATGGGCCTGCCGATG GCGCACAACCTGCTGCGTGG
Product: FMN oxidoreductase
Products: NA
Alternate protein names: Xenobiotic reductase [H]
Number of amino acids: Translated: 365; Mature: 364
Protein sequence:
>365_residues MSQLFSPIAFGPLALANRIVIAPMCQYSAQNGRASDWHRIHLGTLSQSGAGLLILEAAAVVPEGRISYADLGLYDDATEQ ALAEVLQSVRRWSPMPIGIQLAHAGRKASTDLPWKGGEAIAPDHAHGWQTVSASALPFRQGQPAPQTLDEAGIDAVVDAF VASATRAERLGLELIELHAAHGYLMHQFLSPLSNQRSDAYGGSLENRMRLTLRIFDAVRAAVSEKIAVGVRISATDWVEG GWDVQQSIALSQALDARGAHYIHVSSGGLDPRQQIPLQAGYQIPFAQEIRAQVNTPVIGVGLITEPAQAEAILQEGQADA IALARGILYDPRWPWHAAAALGASVTPAPQYLRCEPRDARGVFAN
Sequences:
>Translated_365_residues MSQLFSPIAFGPLALANRIVIAPMCQYSAQNGRASDWHRIHLGTLSQSGAGLLILEAAAVVPEGRISYADLGLYDDATEQ ALAEVLQSVRRWSPMPIGIQLAHAGRKASTDLPWKGGEAIAPDHAHGWQTVSASALPFRQGQPAPQTLDEAGIDAVVDAF VASATRAERLGLELIELHAAHGYLMHQFLSPLSNQRSDAYGGSLENRMRLTLRIFDAVRAAVSEKIAVGVRISATDWVEG GWDVQQSIALSQALDARGAHYIHVSSGGLDPRQQIPLQAGYQIPFAQEIRAQVNTPVIGVGLITEPAQAEAILQEGQADA IALARGILYDPRWPWHAAAALGASVTPAPQYLRCEPRDARGVFAN >Mature_364_residues SQLFSPIAFGPLALANRIVIAPMCQYSAQNGRASDWHRIHLGTLSQSGAGLLILEAAAVVPEGRISYADLGLYDDATEQA LAEVLQSVRRWSPMPIGIQLAHAGRKASTDLPWKGGEAIAPDHAHGWQTVSASALPFRQGQPAPQTLDEAGIDAVVDAFV ASATRAERLGLELIELHAAHGYLMHQFLSPLSNQRSDAYGGSLENRMRLTLRIFDAVRAAVSEKIAVGVRISATDWVEGG WDVQQSIALSQALDARGAHYIHVSSGGLDPRQQIPLQAGYQIPFAQEIRAQVNTPVIGVGLITEPAQAEAILQEGQADAI ALARGILYDPRWPWHAAAALGASVTPAPQYLRCEPRDARGVFAN
Specific function: Catalyzes the reduction of the double bond of an array of alpha, beta-unsaturated aldehydes and ketones. It also reduces the nitro group of nitroester and nitroaromatic compounds. It could have a role in detoxification processes [H]
COG id: COG1902
COG function: function code C; NADH:flavin oxidoreductases, Old Yellow Enzyme family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the NADH:flavin oxidoreductase/NADH oxidase family. NamA subfamily [H]
Homologues:
Organism=Escherichia coli, GI1787939, Length=347, Percent_Identity=29.6829971181556, Blast_Score=126, Evalue=2e-30, Organism=Escherichia coli, GI1789463, Length=331, Percent_Identity=24.773413897281, Blast_Score=107, Evalue=1e-24, Organism=Caenorhabditis elegans, GI72001454, Length=265, Percent_Identity=32.4528301886792, Blast_Score=123, Evalue=2e-28, Organism=Caenorhabditis elegans, GI17559802, Length=259, Percent_Identity=30.8880308880309, Blast_Score=123, Evalue=2e-28, Organism=Caenorhabditis elegans, GI17564188, Length=249, Percent_Identity=30.5220883534137, Blast_Score=120, Evalue=1e-27, Organism=Caenorhabditis elegans, GI17559804, Length=249, Percent_Identity=30.5220883534137, Blast_Score=120, Evalue=2e-27, Organism=Caenorhabditis elegans, GI17565138, Length=214, Percent_Identity=30.8411214953271, Blast_Score=109, Evalue=2e-24, Organism=Caenorhabditis elegans, GI17540738, Length=260, Percent_Identity=28.0769230769231, Blast_Score=108, Evalue=3e-24, Organism=Caenorhabditis elegans, GI17566914, Length=119, Percent_Identity=32.7731092436975, Blast_Score=79, Evalue=3e-15, Organism=Saccharomyces cerevisiae, GI6321973, Length=246, Percent_Identity=29.6747967479675, Blast_Score=89, Evalue=9e-19, Organism=Saccharomyces cerevisiae, GI6325086, Length=250, Percent_Identity=27.2, Blast_Score=87, Evalue=4e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR001155 [H]
Pfam domain/function: PF00724 Oxidored_FMN [H]
EC number: =1.6.99.1 [H]
Molecular weight: Translated: 39113; Mature: 38981
Theoretical pI: Translated: 6.12; Mature: 6.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQLFSPIAFGPLALANRIVIAPMCQYSAQNGRASDWHRIHLGTLSQSGAGLLILEAAAV CCCHHCHHHHHHHHHHCCEEEEEHHHHCCCCCCCCCEEEEEEECCCCCCCCEEEEEHHHH VPEGRISYADLGLYDDATEQALAEVLQSVRRWSPMPIGIQLAHAGRKASTDLPWKGGEAI CCCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCC APDHAHGWQTVSASALPFRQGQPAPQTLDEAGIDAVVDAFVASATRAERLGLELIELHAA CCCCCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH HGYLMHQFLSPLSNQRSDAYGGSLENRMRLTLRIFDAVRAAVSEKIAVGVRISATDWVEG HHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCCCC GWDVQQSIALSQALDARGAHYIHVSSGGLDPRQQIPLQAGYQIPFAQEIRAQVNTPVIGV CCCHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHCCCCCCCCCCHHHHHHHHCCCCEEEE GLITEPAQAEAILQEGQADAIALARGILYDPRWPWHAAAALGASVTPAPQYLRCEPRDAR EECCCCHHHHHHHHCCCCHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCEECCCCCCC GVFAN CCCCC >Mature Secondary Structure SQLFSPIAFGPLALANRIVIAPMCQYSAQNGRASDWHRIHLGTLSQSGAGLLILEAAAV CCHHCHHHHHHHHHHCCEEEEEHHHHCCCCCCCCCEEEEEEECCCCCCCCEEEEEHHHH VPEGRISYADLGLYDDATEQALAEVLQSVRRWSPMPIGIQLAHAGRKASTDLPWKGGEAI CCCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCC APDHAHGWQTVSASALPFRQGQPAPQTLDEAGIDAVVDAFVASATRAERLGLELIELHAA CCCCCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH HGYLMHQFLSPLSNQRSDAYGGSLENRMRLTLRIFDAVRAAVSEKIAVGVRISATDWVEG HHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCCCC GWDVQQSIALSQALDARGAHYIHVSSGGLDPRQQIPLQAGYQIPFAQEIRAQVNTPVIGV CCCHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHCCCCCCCCCCHHHHHHHHCCCCEEEE GLITEPAQAEAILQEGQADAIALARGILYDPRWPWHAAAALGASVTPAPQYLRCEPRDAR EECCCCHHHHHHHHCCCCHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCEECCCCCCC GVFAN CCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA