| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21241073
Identifier: 21241073
GI number: 21241073
Start: 355629
End: 356519
Strand: Reverse
Name: 21241073
Synonym: XAC0299
Alternate gene names: NA
Gene position: 356519-355629 (Counterclockwise)
Preceding gene: 21241074
Following gene: 21241072
Centisome position: 6.89
GC content: 66.22
Gene sequence:
>891_bases ATGAACGCTGCGCGCGACCTGGTCGGCTATGGCGCCACGCCGCCTGCGGCGCAATGGCCCGGCAGCGCGCGCATCGCAGT GCAGTTCGTGGTCAATTACGAAGAAGGCGCGGAGAACTGCGTGCTCAATGGCGATGCGGGGTCTGAGGCGTTCCTGTCCG AAATGGTCGGTGCGCAAGCGCACGCCGGTGCGCGCGCCATGGCAATGGAAAGCCTGTACGAATACGGCAGCCGCGCCGGT TTCTGGCGGCTGCATCGGCTGTTTACCGCACGCAACGTACCGGTGACCGTCTTCGGTGTGGCGCAGGCATTGGCGTCCAA TCCGGATGCGGTGGCCGCGATGCAGGCGGCCCAGTGGGAAATCGCCAGCCACGGTCTGCGCTGGATCGATTATCAACACG TGGACGAGGCCACCGAACGCGCGCACATTGCCGAGGCCATCGCCGTGCATACGCGCGTCACCGGCAGCCGCCCGCTGGGT TGGTATCAGGGCCGAACCAGCCCCAACACCGCCCGCCTGATTGCCGAAGAAGGCGGCTTTGTCTACGACGCCGACAGCTA CGCCGACGATGTGCCGTACTACGACCACCGCCATGGCCGCGCGCAGTTGATCGTGCCGTACACGCTGGATGCCAACGACA TGAAGTTCGTCGCCTACAACGGCTTTGCCGATGGCGAGCCGTTCTTTCGCTATTTGCGCGACAGCTTCGAGCAGTTGCGC GGCGAAGGCGGGCGCATGCTGTCGATCGGCCTGCACGGGCGCATCGTGGGCAAGCCGGCACGCGCGGCGGCGCTGGCGCG CTTTGTGGACCATGTGCTGGCCAGCGGCGATGCCTGGATTGCGCGCCGCATCGATATCGCGCGCCATTGGCTGCAGGTGC ACCCGGCATGA
Upstream 100 bases:
>100_bases TGGCCGCGCTGGAGGCGGTACTGCGCGCCGAAGGCTATGCCTGCACGCACGGCCTGGCGGTGGAAGCGGCACTGGCCGCC TGGCACGCGGAAGTGCAGGC
Downstream 100 bases:
>100_bases GCATTGCAGCCTCCGAGATCGATCTGCCCGAGGTGATCGCGCAGGTGACTGCCGCCTTCCATGCCTACGAAGCAGCGTTG ATGCGCGACGACATCGCCGC
Product: hypothetical protein
Products: NA
Alternate protein names: Urate Catabolism Protein; Polysaccharide Deacetylase Family Protein; Chitin Deacetylase; Xylanase/Chitin Deacetylase; Chitooligosaccharide Deacetylase; Polysaccharide Deacetylase Family; Chitooligosaccharide Deacetylase Protein; Uricase; Polysaccharide Deacetylase Domain Protein; Polysaccharide Deacetylase Protein Pda4B; Hydrolase; Carbohydrate Esterase Family 4 Domain Protein; Chitinase; Deacetylase Protein; Allantoinase; Deacetylase
Number of amino acids: Translated: 296; Mature: 296
Protein sequence:
>296_residues MNAARDLVGYGATPPAAQWPGSARIAVQFVVNYEEGAENCVLNGDAGSEAFLSEMVGAQAHAGARAMAMESLYEYGSRAG FWRLHRLFTARNVPVTVFGVAQALASNPDAVAAMQAAQWEIASHGLRWIDYQHVDEATERAHIAEAIAVHTRVTGSRPLG WYQGRTSPNTARLIAEEGGFVYDADSYADDVPYYDHRHGRAQLIVPYTLDANDMKFVAYNGFADGEPFFRYLRDSFEQLR GEGGRMLSIGLHGRIVGKPARAAALARFVDHVLASGDAWIARRIDIARHWLQVHPA
Sequences:
>Translated_296_residues MNAARDLVGYGATPPAAQWPGSARIAVQFVVNYEEGAENCVLNGDAGSEAFLSEMVGAQAHAGARAMAMESLYEYGSRAG FWRLHRLFTARNVPVTVFGVAQALASNPDAVAAMQAAQWEIASHGLRWIDYQHVDEATERAHIAEAIAVHTRVTGSRPLG WYQGRTSPNTARLIAEEGGFVYDADSYADDVPYYDHRHGRAQLIVPYTLDANDMKFVAYNGFADGEPFFRYLRDSFEQLR GEGGRMLSIGLHGRIVGKPARAAALARFVDHVLASGDAWIARRIDIARHWLQVHPA >Mature_296_residues MNAARDLVGYGATPPAAQWPGSARIAVQFVVNYEEGAENCVLNGDAGSEAFLSEMVGAQAHAGARAMAMESLYEYGSRAG FWRLHRLFTARNVPVTVFGVAQALASNPDAVAAMQAAQWEIASHGLRWIDYQHVDEATERAHIAEAIAVHTRVTGSRPLG WYQGRTSPNTARLIAEEGGFVYDADSYADDVPYYDHRHGRAQLIVPYTLDANDMKFVAYNGFADGEPFFRYLRDSFEQLR GEGGRMLSIGLHGRIVGKPARAAALARFVDHVLASGDAWIARRIDIARHWLQVHPA
Specific function: Unknown
COG id: COG0726
COG function: function code G; Predicted xylanase/chitin deacetylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32487; Mature: 32487
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNAARDLVGYGATPPAAQWPGSARIAVQFVVNYEEGAENCVLNGDAGSEAFLSEMVGAQA CCCHHHHHCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCEEEECCCCHHHHHHHHHCCHH HAGARAMAMESLYEYGSRAGFWRLHRLFTARNVPVTVFGVAQALASNPDAVAAMQAAQWE CCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEHHHHHHHHCCCCHHHHHHHHHHH IASHGLRWIDYQHVDEATERAHIAEAIAVHTRVTGSRPLGWYQGRTSPNTARLIAEEGGF HHHCCCEEECHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCE VYDADSYADDVPYYDHRHGRAQLIVPYTLDANDMKFVAYNGFADGEPFFRYLRDSFEQLR EEECCCCCCCCCCCCCCCCCEEEEEEEEECCCCEEEEEECCCCCCHHHHHHHHHHHHHHH GEGGRMLSIGLHGRIVGKPARAAALARFVDHVLASGDAWIARRIDIARHWLQVHPA CCCCCEEEEECCEEEECCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MNAARDLVGYGATPPAAQWPGSARIAVQFVVNYEEGAENCVLNGDAGSEAFLSEMVGAQA CCCHHHHHCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCEEEECCCCHHHHHHHHHCCHH HAGARAMAMESLYEYGSRAGFWRLHRLFTARNVPVTVFGVAQALASNPDAVAAMQAAQWE CCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEHHHHHHHHCCCCHHHHHHHHHHH IASHGLRWIDYQHVDEATERAHIAEAIAVHTRVTGSRPLGWYQGRTSPNTARLIAEEGGF HHHCCCEEECHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCE VYDADSYADDVPYYDHRHGRAQLIVPYTLDANDMKFVAYNGFADGEPFFRYLRDSFEQLR EEECCCCCCCCCCCCCCCCCEEEEEEEEECCCCEEEEEECCCCCCHHHHHHHHHHHHHHH GEGGRMLSIGLHGRIVGKPARAAALARFVDHVLASGDAWIARRIDIARHWLQVHPA CCCCCEEEEECCEEEECCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA