| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21241059
Identifier: 21241059
GI number: 21241059
Start: 338728
End: 339228
Strand: Direct
Name: 21241059
Synonym: XAC0285
Alternate gene names: NA
Gene position: 338728-339228 (Clockwise)
Preceding gene: 21241057
Following gene: 21241063
Centisome position: 6.54
GC content: 61.08
Gene sequence:
>501_bases GTGACAGCATTCAAACGACTAGCTCACTTGATTCTCACGACCGATGGTGTGAATTATGTTGCACAGCAGCATCGGAGCCG CACAATGCTCGACCCACGCATCGAAAAGGTAGACCTGGCGCTTACCGAGATTGCCCAGGACCCATCGGAAAAGGTGGCAT TGTGGCAATGGGCATGCCGCGAGATGCTGCACGAGACGTTGATCGGCATGCACCAGCTTTCGCACTTGGCCGGCATCGCA AGGCAGGTGGCCAACGACTGGCGCGAGCCGGTGGATGTCATCGCTCCTGCAAAGCCCTACCTGGCCGCATCTGCGCTTGC CGATCGCCGTCTGCCGCAGGTGCTCGACGGCCTGGGCAGCACGCACGACGACAACGACCGCGCCACCTTATGGCGGCTGC GTTACGCGAGCCTGATCGCTTCGACCTTGCAAGGCATGCAGGCGCTTGCGGAAAAGCACCGCATCGACCGCCAGGCGATG GCGATCGGGTCGTTGAACTAG
Upstream 100 bases:
>100_bases CGGCGCAGGACGTCGCCATGGGCAGGAAGTCAGGGTGCCGGTAGTGCACGCGATGGCAGACGCTAGTCGCGAAGCGTGAA CCCGGTCGAGCATCGGCGCA
Downstream 100 bases:
>100_bases CGGCGATCGGTCCGCACCTCGCGGTTATGTGTCTTGCACGTGGGTAGCAGCTGACGCTTGCGCGTCCGTTCAAAGGCCCA TCTCACCGGGCAGCATTACC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 166; Mature: 165
Protein sequence:
>166_residues MTAFKRLAHLILTTDGVNYVAQQHRSRTMLDPRIEKVDLALTEIAQDPSEKVALWQWACREMLHETLIGMHQLSHLAGIA RQVANDWREPVDVIAPAKPYLAASALADRRLPQVLDGLGSTHDDNDRATLWRLRYASLIASTLQGMQALAEKHRIDRQAM AIGSLN
Sequences:
>Translated_166_residues MTAFKRLAHLILTTDGVNYVAQQHRSRTMLDPRIEKVDLALTEIAQDPSEKVALWQWACREMLHETLIGMHQLSHLAGIA RQVANDWREPVDVIAPAKPYLAASALADRRLPQVLDGLGSTHDDNDRATLWRLRYASLIASTLQGMQALAEKHRIDRQAM AIGSLN >Mature_165_residues TAFKRLAHLILTTDGVNYVAQQHRSRTMLDPRIEKVDLALTEIAQDPSEKVALWQWACREMLHETLIGMHQLSHLAGIAR QVANDWREPVDVIAPAKPYLAASALADRRLPQVLDGLGSTHDDNDRATLWRLRYASLIASTLQGMQALAEKHRIDRQAMA IGSLN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18625; Mature: 18493
Theoretical pI: Translated: 7.81; Mature: 7.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAFKRLAHLILTTDGVNYVAQQHRSRTMLDPRIEKVDLALTEIAQDPSEKVALWQWACR CCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHH EMLHETLIGMHQLSHLAGIARQVANDWREPVDVIAPAKPYLAASALADRRLPQVLDGLGS HHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCC THDDNDRATLWRLRYASLIASTLQGMQALAEKHRIDRQAMAIGSLN CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure TAFKRLAHLILTTDGVNYVAQQHRSRTMLDPRIEKVDLALTEIAQDPSEKVALWQWACR CHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHH EMLHETLIGMHQLSHLAGIARQVANDWREPVDVIAPAKPYLAASALADRRLPQVLDGLGS HHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCC THDDNDRATLWRLRYASLIASTLQGMQALAEKHRIDRQAMAIGSLN CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA