| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is catD
Identifier: 21241057
GI number: 21241057
Start: 336818
End: 337519
Strand: Direct
Name: catD
Synonym: XAC0283
Alternate gene names: NA
Gene position: 336818-337519 (Clockwise)
Preceding gene: 21241056
Following gene: 21241059
Centisome position: 6.51
GC content: 68.52
Gene sequence:
>702_bases ATGAGCGCACCGCGTCCCACCTTGTTGCTGCTCCCCGGCCTGCTCAACGATGCGCAGTTGTGGCAAGCGCAGCGCGTCGC GTTGGCCGATGTCGCCGACTGCGTGGTCGGCGACATCACCCAGGGCGACAGCATGCGTGCGCTGGCAATGCAGCTGCTGG CGCAGATGCCGCTGCGTTTTGCATTGGCCGGATTTTCGTTGGGCGGCTACGTCGCGCAGGAGATCCTGCGCATCGCGCCG GAGCGTGTGGAGCGGCTGGCCTTGCTGGACACTTCCGCACGTGCCGATCCGCCCGAGCGTGCGGCGCAGCGGCGCGCGCA GGAAGCGAGCGTGCGTGGCGCCAATGCCTTCCACGGGTTCGGCGAGCGGCTGCTGCGCCACTACGTGCATCCCTCGCGCT GGCAGGACGAGGTCTTGCTGGAGCGGGTGCGTGACATGACCCAGCGCCTGGGCGTGGAGGTGTTCCTGCGGCAGAACCGG CTGCAGCGGGAAGACGGCCGCGCGTTGCTGCGCGCCTATCCCGGTCCGTTGCTGGTGCTATGCGGCCAGGGCGATGCGAT CACTCCGCCTGCATTGCATGAGGAAATGGCCGCACTAGCTGCACACGCGCGTCTGGTGCAGGTGCCTGCGTGTGGCCATT TGTCGCCACTGGAGCAGCCGCGGGCGGTGTCGGACGCACTGCGGGAATGGCTGCTCGCCTGA
Upstream 100 bases:
>100_bases TCAGGGTGCGCCTGCCCGGGCTGGCGATGGGCGTCGCTGCCCGGCACACTGTTGCGATGACGGTACCTGCTTCTGCGACC CCGGTCGGACCTTCCTGCGC
Downstream 100 bases:
>100_bases CGCTGTAACCACCGAGCTGAGGCGGCCATGCCGTGGCCATGCGGCAGGATGGCGTCGGCCAGTGCGCGAGGCTTTGAACC GCCGGTTGGGGGCGGTGATC
Product: hydrolase
Products: NA
Alternate protein names: Hydrolase; Alpha/Beta Hydrolase Fold Protein; Hydrolase Alpha/Beta Fold Family; Alpha/Beta Hydrolase Fold; Alpha/Beta Hydrolase Protein; Alpha/Beta Fold Family Hydrolase; Alpha/Beta Hydrolase Family Protein; Hydrolase Or Acyltransferase; Alpha/Beta Family Hydrolase; Hydrolase Alpha; Alpha/Beta Hydrolase Superfamily Protein; Hydrolase Alpha/Beta Hydrolase Fold Family Protein; Lipolytic
Number of amino acids: Translated: 233; Mature: 232
Protein sequence:
>233_residues MSAPRPTLLLLPGLLNDAQLWQAQRVALADVADCVVGDITQGDSMRALAMQLLAQMPLRFALAGFSLGGYVAQEILRIAP ERVERLALLDTSARADPPERAAQRRAQEASVRGANAFHGFGERLLRHYVHPSRWQDEVLLERVRDMTQRLGVEVFLRQNR LQREDGRALLRAYPGPLLVLCGQGDAITPPALHEEMAALAAHARLVQVPACGHLSPLEQPRAVSDALREWLLA
Sequences:
>Translated_233_residues MSAPRPTLLLLPGLLNDAQLWQAQRVALADVADCVVGDITQGDSMRALAMQLLAQMPLRFALAGFSLGGYVAQEILRIAP ERVERLALLDTSARADPPERAAQRRAQEASVRGANAFHGFGERLLRHYVHPSRWQDEVLLERVRDMTQRLGVEVFLRQNR LQREDGRALLRAYPGPLLVLCGQGDAITPPALHEEMAALAAHARLVQVPACGHLSPLEQPRAVSDALREWLLA >Mature_232_residues SAPRPTLLLLPGLLNDAQLWQAQRVALADVADCVVGDITQGDSMRALAMQLLAQMPLRFALAGFSLGGYVAQEILRIAPE RVERLALLDTSARADPPERAAQRRAQEASVRGANAFHGFGERLLRHYVHPSRWQDEVLLERVRDMTQRLGVEVFLRQNRL QREDGRALLRAYPGPLLVLCGQGDAITPPALHEEMAALAAHARLVQVPACGHLSPLEQPRAVSDALREWLLA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25705; Mature: 25574
Theoretical pI: Translated: 7.60; Mature: 7.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAPRPTLLLLPGLLNDAQLWQAQRVALADVADCVVGDITQGDSMRALAMQLLAQMPLRF CCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH ALAGFSLGGYVAQEILRIAPERVERLALLDTSARADPPERAAQRRAQEASVRGANAFHGF HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCHHHHHH GERLLRHYVHPSRWQDEVLLERVRDMTQRLGVEVFLRQNRLQREDGRALLRAYPGPLLVL HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE CGQGDAITPPALHEEMAALAAHARLVQVPACGHLSPLEQPRAVSDALREWLLA ECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCC >Mature Secondary Structure SAPRPTLLLLPGLLNDAQLWQAQRVALADVADCVVGDITQGDSMRALAMQLLAQMPLRF CCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH ALAGFSLGGYVAQEILRIAPERVERLALLDTSARADPPERAAQRRAQEASVRGANAFHGF HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCHHHHHH GERLLRHYVHPSRWQDEVLLERVRDMTQRLGVEVFLRQNRLQREDGRALLRAYPGPLLVL HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE CGQGDAITPPALHEEMAALAAHARLVQVPACGHLSPLEQPRAVSDALREWLLA ECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA