| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is proP [H]
Identifier: 21240884
GI number: 21240884
Start: 127200
End: 128672
Strand: Direct
Name: proP [H]
Synonym: XAC0110
Alternate gene names: 21240884
Gene position: 127200-128672 (Clockwise)
Preceding gene: 21240883
Following gene: 21240886
Centisome position: 2.46
GC content: 65.65
Gene sequence:
>1473_bases ATGCGTTCGCACTTTGGCTGGTTCAAACGCCGCCGCCAGCTGCAACTGGATGAGGTCACCGTGGTGGACCGCAGCATGCT GCGCAGGGCCGTCGGCGCTGCGGCGCTCGGCAATGCGATGGAGTGGTTCGACTTCGGCGTGTACGGCTATCTGGCGGTGA CGCTGGGCCAGGTGTTCTTCCCGGCAAGCAACCCTACCGCACAATTGATCGCGACCTTCGCCACCTTCACCGTGGCCTTT CTGGTGCGGCCGATCGGCGGCATGGTCTTCGGACCGCTCGGCGACCGCTACGGGCGCCAGAAAGTCCTGGCCGCCACGAT GATCCTGATGGCGCTGGGCACCTTCAGTATCGGACTGATTCCGGCCTACCAGCGCATTGGCCTGTGGGCGCCTGCACTGC TGTTGCTGGCGCGCGTGCTGCAGGGATTTTCCACCGGCGGCGAATACGGTGGCGCGGCCACCTTCATTGCCGAATACGCC ACCGACCGCAATCGCGGCCTGATGGGCAGCTGGCTGGAGTTCGGCACGCTGGGTGGCTACATCGCCGGCGCCGCCACCGT GACCGCCTTGCACATGAGCGTGACTCCGGCGCAGATGCTCGATTGGGGCTGGCGCGTGCCGTTCCTGATCGCCGGGCCGT TGGGGCTGCTGGGCCTGTACATGCGCATGAAGCTGGAGGAGACCCCGGCATTTCGCGCCCATACCGAACAATCCGAACAG CGCGAGCGGCAGACCGCCGCGCAGGGCCTGACCACGCTGCTGCGCCTGCATTGGCCGCAACTGCTCAAGTGCGTGGGCCT GGTACTGGTGTTCAACGTCACCGACTACATGCTGCTGACCTACATGCCCAGCTACCTCAGCGTCACGATGGGTTACGCCG AGAGCAAGGGCTTGTTGCTGATCATCCTGGTGATGCTGGTGATGATGCCGCTCAACATCGTCGGTGGCATGTTCAGCGAC AAACTGGGCCGGCGGCCGATGATCATCGGTGCCTGCATCGCACTGTTTGCGTTGGCGATCCCGTGCCTGTTGCTGGTCGG CAGCGGCAACGATGGGCTGATCTTCGCCGGACTGATGCTGCTTGGCCTGGCCCTGGTGTGCTTCACCAGCTCGATGCCGT CCACCTTGCCGGCGCTGTTCTACACGCCGGTGCGCTACAGCGCGTTGTCGATTGCCTTCAACGTTTCGGTGTCGTTGTTT GGCGGCACCACGCCGTTGGTCACTGCCTGGCTGGTGGAGCGCACCGGCGACCCGCTGGTGCCGGCCTACTACCTGATGGG CGCAGCGGCGATCGGCTTGTTGACCATGCTGTTCGTGCGCGAAACCGCAGGATTGCCGCTACGCGGCTCGCCGCCGGCGG TGGCCAGCGATGCCGAAGCGCGCGCCCTGCTGCAGGCCGACAGCCCGGTGACGGTGGATGCGCAGTTGCCCGTCACCACC GCAGCCTCGATGGGCCAACCGCGCACGGCGTGA
Upstream 100 bases:
>100_bases GTCCTGTGCGTTGCCAGGGCGAGCGGGTAGCGACGGCCTGCGCCCGGCGAGATATCCCGGGCGCAATTTACGGAGACCAT AGATGCACGATGCCCGCGCG
Downstream 100 bases:
>100_bases GTTGTCAGCTTTTCCGCACGACATGCATCCGCGCCACAGGCGCATATCGTGCTGTTGCAGCAACCGGTGACATAACGCAA GACGCGATGCCGGCGATGGC
Product: proline-betaine transporter
Products: betaine [Cytoplasm]; Proton [Cytoplasm]; L-proline [Cytoplasm] [C]
Alternate protein names: Proline porter II; PPII [H]
Number of amino acids: Translated: 490; Mature: 490
Protein sequence:
>490_residues MRSHFGWFKRRRQLQLDEVTVVDRSMLRRAVGAAALGNAMEWFDFGVYGYLAVTLGQVFFPASNPTAQLIATFATFTVAF LVRPIGGMVFGPLGDRYGRQKVLAATMILMALGTFSIGLIPAYQRIGLWAPALLLLARVLQGFSTGGEYGGAATFIAEYA TDRNRGLMGSWLEFGTLGGYIAGAATVTALHMSVTPAQMLDWGWRVPFLIAGPLGLLGLYMRMKLEETPAFRAHTEQSEQ RERQTAAQGLTTLLRLHWPQLLKCVGLVLVFNVTDYMLLTYMPSYLSVTMGYAESKGLLLIILVMLVMMPLNIVGGMFSD KLGRRPMIIGACIALFALAIPCLLLVGSGNDGLIFAGLMLLGLALVCFTSSMPSTLPALFYTPVRYSALSIAFNVSVSLF GGTTPLVTAWLVERTGDPLVPAYYLMGAAAIGLLTMLFVRETAGLPLRGSPPAVASDAEARALLQADSPVTVDAQLPVTT AASMGQPRTA
Sequences:
>Translated_490_residues MRSHFGWFKRRRQLQLDEVTVVDRSMLRRAVGAAALGNAMEWFDFGVYGYLAVTLGQVFFPASNPTAQLIATFATFTVAF LVRPIGGMVFGPLGDRYGRQKVLAATMILMALGTFSIGLIPAYQRIGLWAPALLLLARVLQGFSTGGEYGGAATFIAEYA TDRNRGLMGSWLEFGTLGGYIAGAATVTALHMSVTPAQMLDWGWRVPFLIAGPLGLLGLYMRMKLEETPAFRAHTEQSEQ RERQTAAQGLTTLLRLHWPQLLKCVGLVLVFNVTDYMLLTYMPSYLSVTMGYAESKGLLLIILVMLVMMPLNIVGGMFSD KLGRRPMIIGACIALFALAIPCLLLVGSGNDGLIFAGLMLLGLALVCFTSSMPSTLPALFYTPVRYSALSIAFNVSVSLF GGTTPLVTAWLVERTGDPLVPAYYLMGAAAIGLLTMLFVRETAGLPLRGSPPAVASDAEARALLQADSPVTVDAQLPVTT AASMGQPRTA >Mature_490_residues MRSHFGWFKRRRQLQLDEVTVVDRSMLRRAVGAAALGNAMEWFDFGVYGYLAVTLGQVFFPASNPTAQLIATFATFTVAF LVRPIGGMVFGPLGDRYGRQKVLAATMILMALGTFSIGLIPAYQRIGLWAPALLLLARVLQGFSTGGEYGGAATFIAEYA TDRNRGLMGSWLEFGTLGGYIAGAATVTALHMSVTPAQMLDWGWRVPFLIAGPLGLLGLYMRMKLEETPAFRAHTEQSEQ RERQTAAQGLTTLLRLHWPQLLKCVGLVLVFNVTDYMLLTYMPSYLSVTMGYAESKGLLLIILVMLVMMPLNIVGGMFSD KLGRRPMIIGACIALFALAIPCLLLVGSGNDGLIFAGLMLLGLALVCFTSSMPSTLPALFYTPVRYSALSIAFNVSVSLF GGTTPLVTAWLVERTGDPLVPAYYLMGAAAIGLLTMLFVRETAGLPLRGSPPAVASDAEARALLQADSPVTVDAQLPVTT AASMGQPRTA
Specific function: Proton symporter that senses osmotic shifts and responds by importing osmolytes such as proline, glycine betaine, stachydrine, pipecolic acid, ectoine and taurine. It is both an osmosensor and an osmoregulator which is available to participate early in th
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family [H]
Homologues:
Organism=Escherichia coli, GI1790550, Length=460, Percent_Identity=52.3913043478261, Blast_Score=507, Evalue=1e-145, Organism=Escherichia coli, GI1789941, Length=425, Percent_Identity=35.7647058823529, Blast_Score=191, Evalue=6e-50, Organism=Escherichia coli, GI1788942, Length=434, Percent_Identity=30.8755760368664, Blast_Score=190, Evalue=2e-49, Organism=Escherichia coli, GI1788292, Length=436, Percent_Identity=31.8807339449541, Blast_Score=185, Evalue=7e-48, Organism=Escherichia coli, GI87082231, Length=438, Percent_Identity=23.0593607305936, Blast_Score=79, Evalue=1e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004736 - InterPro: IPR020846 - InterPro: IPR016196 - InterPro: IPR015041 - InterPro: IPR005828 - InterPro: IPR005829 [H]
Pfam domain/function: PF08946 Osmo_CC; PF00083 Sugar_tr [H]
EC number: NA
Molecular weight: Translated: 52736; Mature: 52736
Theoretical pI: Translated: 9.35; Mature: 9.35
Prosite motif: PS50850 MFS ; PS00216 SUGAR_TRANSPORT_1 ; PS00217 SUGAR_TRANSPORT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 4.9 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSHFGWFKRRRQLQLDEVTVVDRSMLRRAVGAAALGNAMEWFDFGVYGYLAVTLGQVFF CCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHC PASNPTAQLIATFATFTVAFLVRPIGGMVFGPLGDRYGRQKVLAATMILMALGTFSIGLI CCCCCHHHHHHHHHHHHHHHHHHHHCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHH PAYQRIGLWAPALLLLARVLQGFSTGGEYGGAATFIAEYATDRNRGLMGSWLEFGTLGGY HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHCCCHH IAGAATVTALHMSVTPAQMLDWGWRVPFLIAGPLGLLGLYMRMKLEETPAFRAHTEQSEQ HHHHHHHHHHHCCCCHHHHHCCCCCCCCEEECHHHHHHHHHHHHHCCCCCHHHHCHHHHH RERQTAAQGLTTLLRLHWPQLLKCVGLVLVFNVTDYMLLTYMPSYLSVTMGYAESKGLLL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH IILVMLVMMPLNIVGGMFSDKLGRRPMIIGACIALFALAIPCLLLVGSGNDGLIFAGLML HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHH LGLALVCFTSSMPSTLPALFYTPVRYSALSIAFNVSVSLFGGTTPLVTAWLVERTGDPLV HHHHHHHHHCCCCCHHHHHHHCCHHHHHEEEEEEEEEEEECCCHHHHHHHHHHCCCCCCH PAYYLMGAAAIGLLTMLFVRETAGLPLRGSPPAVASDAEARALLQADSPVTVDAQLPVTT HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCCCEEEECCCCCHH AASMGQPRTA HHCCCCCCCC >Mature Secondary Structure MRSHFGWFKRRRQLQLDEVTVVDRSMLRRAVGAAALGNAMEWFDFGVYGYLAVTLGQVFF CCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHC PASNPTAQLIATFATFTVAFLVRPIGGMVFGPLGDRYGRQKVLAATMILMALGTFSIGLI CCCCCHHHHHHHHHHHHHHHHHHHHCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHH PAYQRIGLWAPALLLLARVLQGFSTGGEYGGAATFIAEYATDRNRGLMGSWLEFGTLGGY HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHCCCHH IAGAATVTALHMSVTPAQMLDWGWRVPFLIAGPLGLLGLYMRMKLEETPAFRAHTEQSEQ HHHHHHHHHHHCCCCHHHHHCCCCCCCCEEECHHHHHHHHHHHHHCCCCCHHHHCHHHHH RERQTAAQGLTTLLRLHWPQLLKCVGLVLVFNVTDYMLLTYMPSYLSVTMGYAESKGLLL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH IILVMLVMMPLNIVGGMFSDKLGRRPMIIGACIALFALAIPCLLLVGSGNDGLIFAGLML HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHH LGLALVCFTSSMPSTLPALFYTPVRYSALSIAFNVSVSLFGGTTPLVTAWLVERTGDPLV HHHHHHHHHCCCCCHHHHHHHCCHHHHHEEEEEEEEEEEECCCHHHHHHHHHHCCCCCCH PAYYLMGAAAIGLLTMLFVRETAGLPLRGSPPAVASDAEARALLQADSPVTVDAQLPVTT HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCCCEEEECCCCCHH AASMGQPRTA HHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: betaine [Periplasm]; Proton [Periplasm]; L-proline [Periplasm] [C]
Specific reaction: Proton [Periplasm] + betaine [Periplasm] = Proton [Cytoplasm] + betaine [Cytoplasm] Proton [Periplasm] + L-proline [Periplasm] = Proton [Cytoplasm] + L-proline [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]