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The map label for this gene is 21240874

Identifier: 21240874

GI number: 21240874

Start: 116066

End: 116254

Strand: Reverse

Name: 21240874

Synonym: XAC0100

Alternate gene names: NA

Gene position: 116254-116066 (Counterclockwise)

Preceding gene: 77748505

Following gene: 21240873

Centisome position: 2.25

GC content: 59.79

Gene sequence:

>189_bases
ATGGATAAGAACCGTATCGACGGCGCCGCCAAGCAGGTCAAGGGCTCGGTCAAGGAAGCCATCGGCCGTGTCACTGGCGA
CAAGAGCACCGAATTGGAAGGCGCCGCTGAAAAGAACGTCGGCAAGGTGCAGCGCAAGGCCGGCGAAGTCGCCGATGACG
TGCGCGATGCTGTCAAATCGACCAAGTAA

Upstream 100 bases:

>100_bases
CGCGAATGCAGTAACGCAACTAGTGCATTCGCAAGCGCACATCATGCTCACGCCGTCACGCACAGACTGGCCGGGTTCCC
CAAACGACGAGAGACATCCC

Downstream 100 bases:

>100_bases
GTCGGTTGCATGATCGGTAGGCGGATGCCTGCCGTGCTGTGAACCGCATCAGGACTATGCGTCGCGTACATCGCACGCAG
TGATGTAGCGTAAGCAGCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 62; Mature: 62

Protein sequence:

>62_residues
MDKNRIDGAAKQVKGSVKEAIGRVTGDKSTELEGAAEKNVGKVQRKAGEVADDVRDAVKSTK

Sequences:

>Translated_62_residues
MDKNRIDGAAKQVKGSVKEAIGRVTGDKSTELEGAAEKNVGKVQRKAGEVADDVRDAVKSTK
>Mature_62_residues
MDKNRIDGAAKQVKGSVKEAIGRVTGDKSTELEGAAEKNVGKVQRKAGEVADDVRDAVKSTK

Specific function: Unknown

COG id: COG3237

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0337 (CsbD) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008462 [H]

Pfam domain/function: PF05532 CsbD [H]

EC number: NA

Molecular weight: Translated: 6541; Mature: 6541

Theoretical pI: Translated: 10.20; Mature: 10.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKNRIDGAAKQVKGSVKEAIGRVTGDKSTELEGAAEKNVGKVQRKAGEVADDVRDAVKS
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
TK
CC
>Mature Secondary Structure
MDKNRIDGAAKQVKGSVKEAIGRVTGDKSTELEGAAEKNVGKVQRKAGEVADDVRDAVKS
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
TK
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12024217 [H]