| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21240868
Identifier: 21240868
GI number: 21240868
Start: 110518
End: 111015
Strand: Direct
Name: 21240868
Synonym: XAC0094
Alternate gene names: NA
Gene position: 110518-111015 (Clockwise)
Preceding gene: 21240865
Following gene: 77748506
Centisome position: 2.14
GC content: 62.65
Gene sequence:
>498_bases GTGCCCCATGCGCGCACCTTCTTCCACCGCCTGGCCCACCAAGCGCTTGATCTCGCAGGAAGAAATGTGGGGAAACCTCA GGGTCAGGTTTACTTACCCACCCAAACACCGCTGCCACCCACCCGCAGCAGCCGCCACCTGCTCCCATCCATTGCGCAGC CGCTTCATCGCTTGCCCGCCCACGCATGCATAACCCAGCTGCTTGGCTTCTGCAGTGCCAAGACCCGGCAATGTGATGAC GGAGTCCGATGGGGCAGGGCGCCCCTGACGTTGCGCTTCATTGCGCAGCATCATGTTCTCGACGCCTTGGCAGTAACGCA CCATGCCCGGATGCGGGTGCGTGCGGTATTGCTCGCAGTTGAAGGGCGTGGTGTCGTGCGCCATCGAGTTATACGGCTGT TGCGTTGGCGCAATGTACTTGCTTGTTGCCGTGCCGGTGGCCGAGCGCATGCCTTGTGCATGCGCCGGCTGCACGTATGC CGCGCCACACAGCACTGA
Upstream 100 bases:
>100_bases GTAACGCATGCATCCCGGAGAGTGAGTTAGACAGGCACTTCTGCAATACTTCGCTGGCGCGCATGGTCGGCACTCTTCTC TGGCTTAATCACCTTGAAGC
Downstream 100 bases:
>100_bases CGTTGCCAGCACGAGGCATCGCGCGATGGTGGTGATCCTGTCCATGGTGTTCCCCCTGTATGCACCGATCCTAGCCCACG CGCTGCATGCGCGTGTGGAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 165; Mature: 164
Protein sequence:
>165_residues MPHARTFFHRLAHQALDLAGRNVGKPQGQVYLPTQTPLPPTRSSRHLLPSIAQPLHRLPAHACITQLLGFCSAKTRQCDD GVRWGRAPLTLRFIAQHHVLDALAVTHHARMRVRAVLLAVEGRGVVRHRVIRLLRWRNVLACCRAGGRAHALCMRRLHVC RATQH
Sequences:
>Translated_165_residues MPHARTFFHRLAHQALDLAGRNVGKPQGQVYLPTQTPLPPTRSSRHLLPSIAQPLHRLPAHACITQLLGFCSAKTRQCDD GVRWGRAPLTLRFIAQHHVLDALAVTHHARMRVRAVLLAVEGRGVVRHRVIRLLRWRNVLACCRAGGRAHALCMRRLHVC RATQH >Mature_164_residues PHARTFFHRLAHQALDLAGRNVGKPQGQVYLPTQTPLPPTRSSRHLLPSIAQPLHRLPAHACITQLLGFCSAKTRQCDDG VRWGRAPLTLRFIAQHHVLDALAVTHHARMRVRAVLLAVEGRGVVRHRVIRLLRWRNVLACCRAGGRAHALCMRRLHVCR ATQH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18606; Mature: 18475
Theoretical pI: Translated: 12.36; Mature: 12.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 4.3 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPHARTFFHRLAHQALDLAGRNVGKPQGQVYLPTQTPLPPTRSSRHLLPSIAQPLHRLPA CCCHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCH HACITQLLGFCSAKTRQCDDGVRWGRAPLTLRFIAQHHVLDALAVTHHARMRVRAVLLAV HHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EGRGVVRHRVIRLLRWRNVLACCRAGGRAHALCMRRLHVCRATQH CCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure PHARTFFHRLAHQALDLAGRNVGKPQGQVYLPTQTPLPPTRSSRHLLPSIAQPLHRLPA CCHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCH HACITQLLGFCSAKTRQCDDGVRWGRAPLTLRFIAQHHVLDALAVTHHARMRVRAVLLAV HHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EGRGVVRHRVIRLLRWRNVLACCRAGGRAHALCMRRLHVCRATQH CCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA