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The map label for this gene is ycaK [C]

Identifier: 21240862

GI number: 21240862

Start: 105661

End: 106137

Strand: Reverse

Name: ycaK [C]

Synonym: XAC0088

Alternate gene names: 21240862

Gene position: 106137-105661 (Counterclockwise)

Preceding gene: 21240863

Following gene: 21240859

Centisome position: 2.05

GC content: 61.43

Gene sequence:

>477_bases
ATGCTTTTACCCTCGCCCGATATCGCGTTTTATTTGAAGCGCGCGGCACCTGCGCCAGATGTAGCGGCCGAACACGCGCG
GTTGGATCGCGCCGATGCGCTGGTGCTGGTGTTCCCGATTTACTGGTGGTCGTTTCCCGCGCTGCTCAAAGGCTGGATCG
ACCGGGTGTTGACGCTGGGCTGGGCGTTTGATGAAAGCGCCGAGGGCAAGATCGTGAAGAAGCTGCAGCACCTTGATGTG
CACATGCTGGCCATCGGCGGTGCGGACGAGCGCACCTATGCGCGGCACGGCTACTTCGGTGCGATGAAAATGCAGATCAA
CCACGGCATCTTCGATTTCTGCGGTGCGCCGGTGCGCACCTCGGAGCTGCTGACGGTGCCGGATGCGGGCTTTCCGCAAT
CGCACTTGGACACGGCGCGCGCGATTGGTGCGCGGTTGTTTGCCGTAAGAGCATCTGCTGATAGCGCAACCAGCTGA

Upstream 100 bases:

>100_bases
AGCTAAGTAGCAGCTACCTAAGGTGATGTGAATCGTTCTAGAGTGGTTACCCGCGTCGGCCACCTTTTAAATAGACGAAT
TTGCGCAGGCAGGACCCATC

Downstream 100 bases:

>100_bases
CTCCAGGCTACAGCTGCTGCGTCATTGTGATGTGCAGGTCTGCCCAGCTGCCTGCGTGCCTGCGTGCCTGCGTGCCTGCG
TGCCTGCGTGCCAATGATGC

Product: NAD(P)H oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 158; Mature: 158

Protein sequence:

>158_residues
MLLPSPDIAFYLKRAAPAPDVAAEHARLDRADALVLVFPIYWWSFPALLKGWIDRVLTLGWAFDESAEGKIVKKLQHLDV
HMLAIGGADERTYARHGYFGAMKMQINHGIFDFCGAPVRTSELLTVPDAGFPQSHLDTARAIGARLFAVRASADSATS

Sequences:

>Translated_158_residues
MLLPSPDIAFYLKRAAPAPDVAAEHARLDRADALVLVFPIYWWSFPALLKGWIDRVLTLGWAFDESAEGKIVKKLQHLDV
HMLAIGGADERTYARHGYFGAMKMQINHGIFDFCGAPVRTSELLTVPDAGFPQSHLDTARAIGARLFAVRASADSATS
>Mature_158_residues
MLLPSPDIAFYLKRAAPAPDVAAEHARLDRADALVLVFPIYWWSFPALLKGWIDRVLTLGWAFDESAEGKIVKKLQHLDV
HMLAIGGADERTYARHGYFGAMKMQINHGIFDFCGAPVRTSELLTVPDAGFPQSHLDTARAIGARLFAVRASADSATS

Specific function: Unknown

COG id: COG2249

COG function: function code R; Putative NADPH-quinone reductase (modulator of drug activity B)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the NAD(P)H dehydrogenase (quinone) family [H]

Homologues:

Organism=Homo sapiens, GI156564357, Length=160, Percent_Identity=30.625, Blast_Score=70, Evalue=7e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003680 [H]

Pfam domain/function: PF02525 Flavodoxin_2 [H]

EC number: 1.6.99.- [C]

Molecular weight: Translated: 17350; Mature: 17350

Theoretical pI: Translated: 7.16; Mature: 7.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLPSPDIAFYLKRAAPAPDVAAEHARLDRADALVLVFPIYWWSFPALLKGWIDRVLTLG
CCCCCCCHHHHHHHCCCCCCHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHH
WAFDESAEGKIVKKLQHLDVHMLAIGGADERTYARHGYFGAMKMQINHGIFDFCGAPVRT
CCCCCCCCCHHHHHHHHCCEEEEEECCCCCCHHHHCCCEEEEEEEECCCCHHHCCCCCCC
SELLTVPDAGFPQSHLDTARAIGARLFAVRASADSATS
CCEEECCCCCCCHHHHHHHHHHHHHHEEEECCCCCCCC
>Mature Secondary Structure
MLLPSPDIAFYLKRAAPAPDVAAEHARLDRADALVLVFPIYWWSFPALLKGWIDRVLTLG
CCCCCCCHHHHHHHCCCCCCHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHH
WAFDESAEGKIVKKLQHLDVHMLAIGGADERTYARHGYFGAMKMQINHGIFDFCGAPVRT
CCCCCCCCCHHHHHHHHCCEEEEEECCCCCCHHHHCCCEEEEEEEECCCCHHHCCCCCCC
SELLTVPDAGFPQSHLDTARAIGARLFAVRASADSATS
CCEEECCCCCCCHHHHHHHHHHHHHHEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]