| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21240859
Identifier: 21240859
GI number: 21240859
Start: 103084
End: 104085
Strand: Reverse
Name: 21240859
Synonym: XAC0085
Alternate gene names: NA
Gene position: 104085-103084 (Counterclockwise)
Preceding gene: 21240862
Following gene: 21240857
Centisome position: 2.01
GC content: 61.78
Gene sequence:
>1002_bases TTGGCCGTGGGCATTGCCCGCCCGGCCGCATTACCGCGCACCGCGGCAGATGCGGCCACCCTCAAGCGCCTGCTGCGCAA GGGCGCGCGCAGCCTGGTGCGTACGCTGCCTTGGCGGCACCAGGACCGGCTGTACTTCCTGCATACGTTTGGACGCCTGC CGGATCTGTACGCGCCGAAATGCTTCAACGAGAAGATCCTCTACCGCAAGTGTGTGCATGGTGATTACCTGCAATACCAG CGGTTGGCCGACAAGTTTGCGGTGCGGCCGTATGTGGCGGCCAAGATCGGCCAGGCGCATCTGATCCCGCTATTACTGGA CACCACCGATCCGCAAGATTTGCTGCGCTTGCCGCAATGGCAGCAGACGGTGATCAAGGCCAACCACGGCGCGGCCATGG TGGAAGTGGTGCGCGAAGAGCCGGATGCGCAGCAGAAACGCCGCATCATCGCGCGTTGCGGCCAATGGATGCGCACGGAT TTTTCCGACATGGTGCGCGAGATCCATTACCGCGATATTCCGCCACGCATTCTGGTGGAAAAATACATCGGCGATGCGCA GCAAGTGCCGGTGGACTACAAGTTCCATATGTTTCGGCAGGCCGATGGCACCTTCAAGTACGTGCTGCAAGTGATTTACG GCCGCTTCGACACCCCGAAATTGTCGATGACGTTCTTCGTCGGCAACTTGCACGATGCGTTTCACCGCATCCGCGACGAC GGTCGCGCGCCGCCGTGTGCGCCGGAACTTCTCGAGCAGGCGCTGGAACTGAGCAAGGTGCTGGCCAGCGACTTCGACTA TGTGCGAGTGGATTGGTATATCCAGCACGGGCAGGTGTATTTCGGCGAACTCACCTTTACCCCGGGCGCCGGGTTGGTAA CCGGATTGGACCGTGGGCTGGACCGGATGATGGGCGATATGTGGGTGCAGCGGCGCGCGCCTGGGGAACCGTGTCTGCCG ATGCAAGGGTTTGGTGTGGGTGTGCGCGTGCCACAGCGGTGA
Upstream 100 bases:
>100_bases GAAGGATCTGGATATGGCCGAGAACAGGATGGGGCTGCAGACGCAGCCGATGGGTGCGCATGGGGCCGCCGGGCAACCAT GGGCCGCGTTGCTGCCAGCG
Downstream 100 bases:
>100_bases GGCGTCAACGCAGCTGCAGTGCCCATGCGATGCCTGCAGTGCTCCGGCACGCGGTGCACGGCGGCCGATGATGGCTGACA GCGATGCGCGGATGGTGCAG
Product: hypothetical protein
Products: NA
Alternate protein names: Glycosyl Transferase; Conserved Protein; Sugar Transferase
Number of amino acids: Translated: 333; Mature: 332
Protein sequence:
>333_residues MAVGIARPAALPRTAADAATLKRLLRKGARSLVRTLPWRHQDRLYFLHTFGRLPDLYAPKCFNEKILYRKCVHGDYLQYQ RLADKFAVRPYVAAKIGQAHLIPLLLDTTDPQDLLRLPQWQQTVIKANHGAAMVEVVREEPDAQQKRRIIARCGQWMRTD FSDMVREIHYRDIPPRILVEKYIGDAQQVPVDYKFHMFRQADGTFKYVLQVIYGRFDTPKLSMTFFVGNLHDAFHRIRDD GRAPPCAPELLEQALELSKVLASDFDYVRVDWYIQHGQVYFGELTFTPGAGLVTGLDRGLDRMMGDMWVQRRAPGEPCLP MQGFGVGVRVPQR
Sequences:
>Translated_333_residues MAVGIARPAALPRTAADAATLKRLLRKGARSLVRTLPWRHQDRLYFLHTFGRLPDLYAPKCFNEKILYRKCVHGDYLQYQ RLADKFAVRPYVAAKIGQAHLIPLLLDTTDPQDLLRLPQWQQTVIKANHGAAMVEVVREEPDAQQKRRIIARCGQWMRTD FSDMVREIHYRDIPPRILVEKYIGDAQQVPVDYKFHMFRQADGTFKYVLQVIYGRFDTPKLSMTFFVGNLHDAFHRIRDD GRAPPCAPELLEQALELSKVLASDFDYVRVDWYIQHGQVYFGELTFTPGAGLVTGLDRGLDRMMGDMWVQRRAPGEPCLP MQGFGVGVRVPQR >Mature_332_residues AVGIARPAALPRTAADAATLKRLLRKGARSLVRTLPWRHQDRLYFLHTFGRLPDLYAPKCFNEKILYRKCVHGDYLQYQR LADKFAVRPYVAAKIGQAHLIPLLLDTTDPQDLLRLPQWQQTVIKANHGAAMVEVVREEPDAQQKRRIIARCGQWMRTDF SDMVREIHYRDIPPRILVEKYIGDAQQVPVDYKFHMFRQADGTFKYVLQVIYGRFDTPKLSMTFFVGNLHDAFHRIRDDG RAPPCAPELLEQALELSKVLASDFDYVRVDWYIQHGQVYFGELTFTPGAGLVTGLDRGLDRMMGDMWVQRRAPGEPCLPM QGFGVGVRVPQR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38338; Mature: 38207
Theoretical pI: Translated: 9.73; Mature: 9.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVGIARPAALPRTAADAATLKRLLRKGARSLVRTLPWRHQDRLYFLHTFGRLPDLYAPK CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEHHCCCCCCCCCC CFNEKILYRKCVHGDYLQYQRLADKFAVRPYVAAKIGQAHLIPLLLDTTDPQDLLRLPQW CCCHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHCCCHHEEEEEECCCCHHHHHHCCHH QQTVIKANHGAAMVEVVREEPDAQQKRRIIARCGQWMRTDFSDMVREIHYRDIPPRILVE HHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHH KYIGDAQQVPVDYKFHMFRQADGTFKYVLQVIYGRFDTPKLSMTFFVGNLHDAFHRIRDD HHHCCHHHCCCCHHHHHHHCCCCHHHHHHHHHHCCCCCCCEEEEEEECHHHHHHHHHHHC GRAPPCAPELLEQALELSKVLASDFDYVRVDWYIQHGQVYFGELTFTPGAGLVTGLDRGL CCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCEEEEEEEEECCCCCHHHHHHHHH DRMMGDMWVQRRAPGEPCLPMQGFGVGVRVPQR HHHHHHHHHHHCCCCCCCCCCCCCCCCEECCCC >Mature Secondary Structure AVGIARPAALPRTAADAATLKRLLRKGARSLVRTLPWRHQDRLYFLHTFGRLPDLYAPK CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEHHCCCCCCCCCC CFNEKILYRKCVHGDYLQYQRLADKFAVRPYVAAKIGQAHLIPLLLDTTDPQDLLRLPQW CCCHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHCCCHHEEEEEECCCCHHHHHHCCHH QQTVIKANHGAAMVEVVREEPDAQQKRRIIARCGQWMRTDFSDMVREIHYRDIPPRILVE HHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHH KYIGDAQQVPVDYKFHMFRQADGTFKYVLQVIYGRFDTPKLSMTFFVGNLHDAFHRIRDD HHHCCHHHCCCCHHHHHHHCCCCHHHHHHHHHHCCCCCCCEEEEEEECHHHHHHHHHHHC GRAPPCAPELLEQALELSKVLASDFDYVRVDWYIQHGQVYFGELTFTPGAGLVTGLDRGL CCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCEEEEEEEEECCCCCHHHHHHHHH DRMMGDMWVQRRAPGEPCLPMQGFGVGVRVPQR HHHHHHHHHHHCCCCCCCCCCCCCCCCEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA