| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21240845
Identifier: 21240845
GI number: 21240845
Start: 84643
End: 85683
Strand: Direct
Name: 21240845
Synonym: XAC0071
Alternate gene names: NA
Gene position: 84643-85683 (Clockwise)
Preceding gene: 21240844
Following gene: 21240846
Centisome position: 1.64
GC content: 67.05
Gene sequence:
>1041_bases ATGATCCAGACCACTTCCCCTGTGCTGTGCCTGCGTTCGGCGTTGCTGGTGGCCCTTGCCGCAGTTGCCGGCAGCGCGGC CATCGTACACGCCTCTGCCGTGCCTGCAGTTGCCGGTGTGCGCACCTCACCTGCTGCGCCGGTTTTTGCTGGTTTTGCTA CGCCTTCAACGACGCAGGCTGCACCCATTGCCGATGTCGTGCGTGTGGGTGGCATCGCAACGCCTGCAGTAACACCGGAG ATGAACTTTGCACGAACCGCGCCGGTTGTCGCTGCGCTGCGCGCGCCTGCGACCACTCCGCTAGCCGCGACCACACCCAC GGCACCTGCGCTTGCCATTGCCGGTGCCGCCCGGGCAGCACCAGCAGCGCCCCCGGCCAATGCAGGACCTGCCGGACCTG CTGCACCTGCCATTTCTCCGGCAACACCGGTCGCTCCCACCGCAGCCGCTGCACCGGCACGGCCGCGCGTCGGCACGCAT GAATCCTGCGGCCATGCCACTGCAAACACGCAGAGCCAAGGCGATGCCTACGTGCTGGTGCATGGCGAGGGCGAAGTGAT GCACGGCACGCCCGATGACCTGCACACGGCGCGCCGCTACGCTGGCGATGGAAGACGCGTGCTGTGGTTTCGCGCCGATG GGAAGCAATACCTGGTGCGTGATCCAACCTTGCTCCATCAACTGGCTGTGGCGTATCTGCGCAGCCAGCAACTGGCCGAT GCTCAAGCCAGGTTGGCCGCACGTCAGCAAGCCTTGAGCGAACGGCAGGCTGCACTCGCCGCGCAGCTGTCTGCGCATGC CGAGCCGCGCCTGCTGCAGGCCTCGACACGCACAGCATCTGCCACGACGTCCACCGCGGCGCAGCCGCCTGCGACGCCCG ATGCGCTGCAGGCGTTGGCCAGGCAGCAACAGGCACTGGCGCAGCGACAGGCCGTGTTGGCGAGCAAGCAGGCCGGTGCA TCCCGCCTGGCCACGCAACAGGCATTGAAGGTATTGCGCGAAGCACTGAGAAGCGGGCTGGCGACGCGTATCGACGGTTA G
Upstream 100 bases:
>100_bases TGCAGCGTCGGCAACGCCGTGGCCGCGTGATCGCTGTTTCCATCCGCCTGCGTGCCCTGCGCAGGCGCACTCAACTCACT GTGCCTTTCGTGGAGATCTC
Downstream 100 bases:
>100_bases CCGGACTGCGCCGGTCGCGTGCATGTGCGTGCATCGTGGTGCGCTCGCCGATACTGTGCACAGACACAGGCGGCGAGCAG GCCATGACGTATCGGGTAGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 346; Mature: 346
Protein sequence:
>346_residues MIQTTSPVLCLRSALLVALAAVAGSAAIVHASAVPAVAGVRTSPAAPVFAGFATPSTTQAAPIADVVRVGGIATPAVTPE MNFARTAPVVAALRAPATTPLAATTPTAPALAIAGAARAAPAAPPANAGPAGPAAPAISPATPVAPTAAAAPARPRVGTH ESCGHATANTQSQGDAYVLVHGEGEVMHGTPDDLHTARRYAGDGRRVLWFRADGKQYLVRDPTLLHQLAVAYLRSQQLAD AQARLAARQQALSERQAALAAQLSAHAEPRLLQASTRTASATTSTAAQPPATPDALQALARQQQALAQRQAVLASKQAGA SRLATQQALKVLREALRSGLATRIDG
Sequences:
>Translated_346_residues MIQTTSPVLCLRSALLVALAAVAGSAAIVHASAVPAVAGVRTSPAAPVFAGFATPSTTQAAPIADVVRVGGIATPAVTPE MNFARTAPVVAALRAPATTPLAATTPTAPALAIAGAARAAPAAPPANAGPAGPAAPAISPATPVAPTAAAAPARPRVGTH ESCGHATANTQSQGDAYVLVHGEGEVMHGTPDDLHTARRYAGDGRRVLWFRADGKQYLVRDPTLLHQLAVAYLRSQQLAD AQARLAARQQALSERQAALAAQLSAHAEPRLLQASTRTASATTSTAAQPPATPDALQALARQQQALAQRQAVLASKQAGA SRLATQQALKVLREALRSGLATRIDG >Mature_346_residues MIQTTSPVLCLRSALLVALAAVAGSAAIVHASAVPAVAGVRTSPAAPVFAGFATPSTTQAAPIADVVRVGGIATPAVTPE MNFARTAPVVAALRAPATTPLAATTPTAPALAIAGAARAAPAAPPANAGPAGPAAPAISPATPVAPTAAAAPARPRVGTH ESCGHATANTQSQGDAYVLVHGEGEVMHGTPDDLHTARRYAGDGRRVLWFRADGKQYLVRDPTLLHQLAVAYLRSQQLAD AQARLAARQQALSERQAALAAQLSAHAEPRLLQASTRTASATTSTAAQPPATPDALQALARQQQALAQRQAVLASKQAGA SRLATQQALKVLREALRSGLATRIDG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34905; Mature: 34905
Theoretical pI: Translated: 11.55; Mature: 11.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIQTTSPVLCLRSALLVALAAVAGSAAIVHASAVPAVAGVRTSPAAPVFAGFATPSTTQA CCCCCCHHHHHHHHHHHHHHHHHCCHHEEEHHHHHHHHCCCCCCCCCCEECCCCCCCCCC APIADVVRVGGIATPAVTPEMNFARTAPVVAALRAPATTPLAATTPTAPALAIAGAARAA CHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCC PAAPPANAGPAGPAAPAISPATPVAPTAAAAPARPRVGTHESCGHATANTQSQGDAYVLV CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEE HGEGEVMHGTPDDLHTARRYAGDGRRVLWFRADGKQYLVRDPTLLHQLAVAYLRSQQLAD ECCCCEECCCCHHHHHHHHHCCCCCEEEEEEECCCEEEECCHHHHHHHHHHHHHHHHHHH AQARLAARQQALSERQAALAAQLSAHAEPRLLQASTRTASATTSTAAQPPATPDALQALA HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHCCCCCCCCCCCCCCCCCCHHHHHHHH RQQQALAQRQAVLASKQAGASRLATQQALKVLREALRSGLATRIDG HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHCCCC >Mature Secondary Structure MIQTTSPVLCLRSALLVALAAVAGSAAIVHASAVPAVAGVRTSPAAPVFAGFATPSTTQA CCCCCCHHHHHHHHHHHHHHHHHCCHHEEEHHHHHHHHCCCCCCCCCCEECCCCCCCCCC APIADVVRVGGIATPAVTPEMNFARTAPVVAALRAPATTPLAATTPTAPALAIAGAARAA CHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCC PAAPPANAGPAGPAAPAISPATPVAPTAAAAPARPRVGTHESCGHATANTQSQGDAYVLV CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEE HGEGEVMHGTPDDLHTARRYAGDGRRVLWFRADGKQYLVRDPTLLHQLAVAYLRSQQLAD ECCCCEECCCCHHHHHHHHHCCCCCEEEEEEECCCEEEECCHHHHHHHHHHHHHHHHHHH AQARLAARQQALSERQAALAAQLSAHAEPRLLQASTRTASATTSTAAQPPATPDALQALA HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHCCCCCCCCCCCCCCCCCCHHHHHHHH RQQQALAQRQAVLASKQAGASRLATQQALKVLREALRSGLATRIDG HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA