| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is blaR1 [H]
Identifier: 21240844
GI number: 21240844
Start: 82247
End: 83968
Strand: Direct
Name: blaR1 [H]
Synonym: XAC0070
Alternate gene names: 21240844
Gene position: 82247-83968 (Clockwise)
Preceding gene: 21240843
Following gene: 21240845
Centisome position: 1.59
GC content: 69.34
Gene sequence:
>1722_bases ATGTCGCCCCTGATCGAAGCGGTGTTATGGAAGCTTGGCGCCACCAGCGTGCAGACCGCGGTGCTGGTGCTGGTGGTGTG GGCGCTGTGCCGCGGCGTGCGCCGCCTTCCGGCAGCCACGCAGACCTGGTTGTGGTGGCTGGTGGGCGTGCAGGCGATGG TGGGCCTGGTGTGGAGCAACCCGGTCCAACTGCCGGTGCTGCCGGCGCACAGCGTGACGAGTGCGCTGGGCTCGGCCGAC AGCCTGGCGCCACTGGCAAACGCCACCGCCGCGGCATCCACGGCCGCGCATGCAGGCGCCACCGCGCAGGCCATGCAGGC TGGCGCGTGGTCGACCTGGCCGGTGGTATTGCTGGCGCTGTGGGCGGCCGGCGTGCTGGTGCTGGCCGCCGGCACGGCGC GCGCCTATCTACGCAGTCGTGCATTGGTGCGCGTGGCGCAGCCCTGCAATGACAAAGCCTTGGTGCAGGCGTTGCAGATG GCTGCTGAGGCGCATGGCTTGTCGCGCCCGCCGGCGCTGCGGCTGTCGGCGCAAATCGACTCGCCGCTGTTGATCGGCCC GTGGCAACCGGTGTTGCTGTTGCCTGCTGCACGGTTGCCGCACATGGCCGATGACGATCTGGACATGGCGCTGACCCACG AGTTGATCCATCTGCGTCGCCGCGACCTGTGGTGGGGCCTGCTGCCGGCGCTGGCGCAGCACCTGTTCTTCTTCCACCCG CTGGTGCATCTGGCCGTGCGCGAATATGCGATCGCCCGCGAAGCCGCCTGCGATGCCGCCGTGGTCGCCGGGCACCGCCA TTGCCGCCACGACTACGGCCGCTTGTTGCTGCAACTGGGTGTGGCCCCGCGTCCGCGCGGTGGTGTGGCAAGCGCCTCGC CTTCGTTCATCAGCTTGAAGCGCAGGCTGTCGATGTTGCAGGACACCCACGCGTTTCCGCGGCTGGCCGCGGCGATGATT TTGGCCGCGGTGGCCGTTTGCGGTGTACTGCCGCTGCGCCTGGTGGCCATGCCGGTGCCGGCACCGGTGACGTCTGCCGG CATGCAGCCGGTTGTGGTGACTGCCCCGCCAGCGCCACGTGCACAGGTCAGCAGCACGGCAGAGGCTGCCGACGCCGCAG CGCCGATGCGCGCGTTGCCTGCACCGGCGCTGCCGGCTGCGCCTGCGGAAGCGGCCGCCCCTGCCACGCACGGTGTCATC GTCGATGTGCTGGGCGCCGAACCGCTGCATGACGAGGACGCAGACCCCATGGACAGTGGCTGGAATCTCGACCTGGACCG CATCCGCCGCGATGCCAGCCGTGACGCGCAAGCCGCCGTGCACGATGCGTTCGCTGCCGACAACCACGACCTTGAACGAC AGCAAGACCGCATGCAGGCCGCACAGGACGCATTGCAGGAAGCACGCGAACAACTGGCCTCCCTCGGCCCGGAACTGGCG CAGGCCAAACAGGAGGCGCAACAGCAAGCGCGCGAAGCCCAGCAGCAGATTCGCGACGTGGCGCAGCAGCATCGTCAGGC GCAATACGCGTATGCCGCCGCGGTGCGACAAGCGGACGCGCTGTCGCGGCACCAGGTCGAACTGGCCAAGCAGGCCGCTC TTCAGGGCCGCGCCGAGGCCAGACGTGGGCAACGCGAGGCAGCGCAAGCGCAGGTAGAGGCCGAAAAAGCGCAAGCAGAG GCAGACCAGGCGCAAGCGGAAGCAGAACGCGCGAACAACTAG
Upstream 100 bases:
>100_bases GGCGTGGATGTCGCAACGCGCCGAAGTCAGCGATACCGAACTGGCCGAACTCGAAGCATTGGTCGCCAAGCTGCAGTCGC AGCGCAAGGAGGATTGAGTC
Downstream 100 bases:
>100_bases ACACCATTGACGAAACGCCTGCGCTCACGTCAGGCGGGCGTGGTGGTACGAGGAGTGAGCATGCACCACGCATAGGTTCG GGGACGCATCGCTTCTTGGC
Product: ankyrin-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 573; Mature: 572
Protein sequence:
>573_residues MSPLIEAVLWKLGATSVQTAVLVLVVWALCRGVRRLPAATQTWLWWLVGVQAMVGLVWSNPVQLPVLPAHSVTSALGSAD SLAPLANATAAASTAAHAGATAQAMQAGAWSTWPVVLLALWAAGVLVLAAGTARAYLRSRALVRVAQPCNDKALVQALQM AAEAHGLSRPPALRLSAQIDSPLLIGPWQPVLLLPAARLPHMADDDLDMALTHELIHLRRRDLWWGLLPALAQHLFFFHP LVHLAVREYAIAREAACDAAVVAGHRHCRHDYGRLLLQLGVAPRPRGGVASASPSFISLKRRLSMLQDTHAFPRLAAAMI LAAVAVCGVLPLRLVAMPVPAPVTSAGMQPVVVTAPPAPRAQVSSTAEAADAAAPMRALPAPALPAAPAEAAAPATHGVI VDVLGAEPLHDEDADPMDSGWNLDLDRIRRDASRDAQAAVHDAFAADNHDLERQQDRMQAAQDALQEAREQLASLGPELA QAKQEAQQQAREAQQQIRDVAQQHRQAQYAYAAAVRQADALSRHQVELAKQAALQGRAEARRGQREAAQAQVEAEKAQAE ADQAQAEAERANN
Sequences:
>Translated_573_residues MSPLIEAVLWKLGATSVQTAVLVLVVWALCRGVRRLPAATQTWLWWLVGVQAMVGLVWSNPVQLPVLPAHSVTSALGSAD SLAPLANATAAASTAAHAGATAQAMQAGAWSTWPVVLLALWAAGVLVLAAGTARAYLRSRALVRVAQPCNDKALVQALQM AAEAHGLSRPPALRLSAQIDSPLLIGPWQPVLLLPAARLPHMADDDLDMALTHELIHLRRRDLWWGLLPALAQHLFFFHP LVHLAVREYAIAREAACDAAVVAGHRHCRHDYGRLLLQLGVAPRPRGGVASASPSFISLKRRLSMLQDTHAFPRLAAAMI LAAVAVCGVLPLRLVAMPVPAPVTSAGMQPVVVTAPPAPRAQVSSTAEAADAAAPMRALPAPALPAAPAEAAAPATHGVI VDVLGAEPLHDEDADPMDSGWNLDLDRIRRDASRDAQAAVHDAFAADNHDLERQQDRMQAAQDALQEAREQLASLGPELA QAKQEAQQQAREAQQQIRDVAQQHRQAQYAYAAAVRQADALSRHQVELAKQAALQGRAEARRGQREAAQAQVEAEKAQAE ADQAQAEAERANN >Mature_572_residues SPLIEAVLWKLGATSVQTAVLVLVVWALCRGVRRLPAATQTWLWWLVGVQAMVGLVWSNPVQLPVLPAHSVTSALGSADS LAPLANATAAASTAAHAGATAQAMQAGAWSTWPVVLLALWAAGVLVLAAGTARAYLRSRALVRVAQPCNDKALVQALQMA AEAHGLSRPPALRLSAQIDSPLLIGPWQPVLLLPAARLPHMADDDLDMALTHELIHLRRRDLWWGLLPALAQHLFFFHPL VHLAVREYAIAREAACDAAVVAGHRHCRHDYGRLLLQLGVAPRPRGGVASASPSFISLKRRLSMLQDTHAFPRLAAAMIL AAVAVCGVLPLRLVAMPVPAPVTSAGMQPVVVTAPPAPRAQVSSTAEAADAAAPMRALPAPALPAAPAEAAAPATHGVIV DVLGAEPLHDEDADPMDSGWNLDLDRIRRDASRDAQAAVHDAFAADNHDLERQQDRMQAAQDALQEAREQLASLGPELAQ AKQEAQQQAREAQQQIRDVAQQHRQAQYAYAAAVRQADALSRHQVELAKQAALQGRAEARRGQREAAQAQVEAEKAQAEA DQAQAEAERANN
Specific function: BlaR1 is a potential penicillin-binding protein required for induction of beta-lactamase in Bacillus licheniformis [H]
COG id: COG4219
COG function: function code KT; Antirepressor regulating drug resistance, predicted signal transduction N-terminal membrane component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M56 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012338 - InterPro: IPR001460 - InterPro: IPR008756 [H]
Pfam domain/function: PF05569 Peptidase_M56; PF00905 Transpeptidase [H]
EC number: NA
Molecular weight: Translated: 61015; Mature: 60884
Theoretical pI: Translated: 7.19; Mature: 7.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPLIEAVLWKLGATSVQTAVLVLVVWALCRGVRRLPAATQTWLWWLVGVQAMVGLVWSN CCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCC PVQLPVLPAHSVTSALGSADSLAPLANATAAASTAAHAGATAQAMQAGAWSTWPVVLLAL CCCCCEECHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCHHHHHHHHH WAAGVLVLAAGTARAYLRSRALVRVAQPCNDKALVQALQMAAEAHGLSRPPALRLSAQID HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEECCC SPLLIGPWQPVLLLPAARLPHMADDDLDMALTHELIHLRRRDLWWGLLPALAQHLFFFHP CCEEECCCCHHHHCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LVHLAVREYAIAREAACDAAVVAGHRHCRHDYGRLLLQLGVAPRPRGGVASASPSFISLK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHH RRLSMLQDTHAFPRLAAAMILAAVAVCGVLPLRLVAMPVPAPVTSAGMQPVVVTAPPAPR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCEEEECCCCCC AQVSSTAEAADAAAPMRALPAPALPAAPAEAAAPATHGVIVDVLGAEPLHDEDADPMDSG HHHHHHHHHHHHHCCHHHCCCCCCCCCCCHHCCCCCCCCEEEECCCCCCCCCCCCCCCCC WNLDLDRIRRDASRDAQAAVHDAFAADNHDLERQQDRMQAAQDALQEAREQLASLGPELA CCCCHHHHHHHHCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH QAKQEAQQQAREAQQQIRDVAQQHRQAQYAYAAAVRQADALSRHQVELAKQAALQGRAEA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RRGQREAAQAQVEAEKAQAEADQAQAEAERANN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SPLIEAVLWKLGATSVQTAVLVLVVWALCRGVRRLPAATQTWLWWLVGVQAMVGLVWSN CHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCC PVQLPVLPAHSVTSALGSADSLAPLANATAAASTAAHAGATAQAMQAGAWSTWPVVLLAL CCCCCEECHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCHHHHHHHHH WAAGVLVLAAGTARAYLRSRALVRVAQPCNDKALVQALQMAAEAHGLSRPPALRLSAQID HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEECCC SPLLIGPWQPVLLLPAARLPHMADDDLDMALTHELIHLRRRDLWWGLLPALAQHLFFFHP CCEEECCCCHHHHCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LVHLAVREYAIAREAACDAAVVAGHRHCRHDYGRLLLQLGVAPRPRGGVASASPSFISLK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHH RRLSMLQDTHAFPRLAAAMILAAVAVCGVLPLRLVAMPVPAPVTSAGMQPVVVTAPPAPR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCEEEECCCCCC AQVSSTAEAADAAAPMRALPAPALPAAPAEAAAPATHGVIVDVLGAEPLHDEDADPMDSG HHHHHHHHHHHHHCCHHHCCCCCCCCCCCHHCCCCCCCCEEEECCCCCCCCCCCCCCCCC WNLDLDRIRRDASRDAQAAVHDAFAADNHDLERQQDRMQAAQDALQEAREQLASLGPELA CCCCHHHHHHHHCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH QAKQEAQQQAREAQQQIRDVAQQHRQAQYAYAAAVRQADALSRHQVELAKQAALQGRAEA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RRGQREAAQAQVEAEKAQAEADQAQAEAERANN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 3040663; 3260234; 2404938 [H]