| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21240819
Identifier: 21240819
GI number: 21240819
Start: 55159
End: 56427
Strand: Reverse
Name: 21240819
Synonym: XAC0045
Alternate gene names: NA
Gene position: 56427-55159 (Counterclockwise)
Preceding gene: 77748501
Following gene: 21240814
Centisome position: 1.09
GC content: 66.82
Gene sequence:
>1269_bases ATGACCGCTGGCGCGCCTGCGCGCCAGCCTGCGCAGACCGGGCTGGTGGCCGTGTGCCTGGGCCTCTACCTGCTGTTCTG TCTGCAGCAAGTGGTGTTGACCGGCCGCTACTTCGGGGTCGGTCTGTCGCTAGGATCGATGGCCATCCGCGGCGTTGCGC TTGGCCTGAGTGCATGGGCGTTATGGCGGCACGGCGTTCCGGCATGCCTGCGCTGGCCATTGCTGTCGATCCTGCTGTGT ATGACTGCGCTGGCAGCGTCGGTGCTGGCGTCCGACCACTCGGCCTTGGCATTCAAGTACGCCGTGCGTTATGCCACTGC CTTGCTGTGGCTATGGGCCTTGTTGAATCTGGCGGTGGCGTGGCCGCAGTGGCCGCGCGCGGCGGCGCTGGCGGCGTTGA TCGCGGTGTGGATCAATCTTGCGTTGGGTATGGCGGTACGGCTGCAGTGGCCGCCGGCATTGGAGTGGTCGTTGGCCTTC CATGCGCAGGGCAGCTTCAAGTACCTGCCTCGGGTGTCGGGCATGTACGACCATCCCGCATTGCTGGCCGCAACTGCCGT CATCGTCGGGTTGCTCACGATCCAGTTGTATCAGCGGCACGCGGTCGGGCGCGCGCAACTGGCGGCGGCCGTGCTGGCTG CAATCGGCGCGCTGGCGCTGAGTGAAGTACGTAACCCGTTGCTGCCGGTGGCCGGGTTGATCCTCTGGTGGGCGTGGTCG CGCCGCGCTGGCGAACGTCCTCGCCGCCGCACGGTCTGGGCCGCCGCGCTCGGCCTGCTGGCCGTTGCTGGCTTCGTGCT TTGGCAGCGCTACGCGGAGATGACCAGCGCAGTGCACGAAAGCCCGCTGACCGCGTTCTCGTTGGGGCGCACCTACCTGT GGTCGGGCGCGATCGAGGCATGGCGCAGCCACCCCTGGTTCGGGCTCGGCGCCGGTGTCTTCCAGTTTCTGGTGCCCGAT TACACCGGCGGTCGCTTCGATCGCGGCGAGCTGCACGCACACAACGGCCTGCTGGCGGTGTTGTCGGAAACCGGGCTGTG CGGGCTGCTCGCCTGCGTGTGCATGCTTTGGGCGCTCTGGGCGCCGTTGCTGCGCAACCCTGCCGAACGTGGCTGGGCGC TGATCTGGCTGCTGTTCCTGCTGGGCTTGAACGTGTTCGATTTCTATCCGCTGTTCTATCCCTTTTCCCTGCATGCGGCC CTGGCGGTGGCGCTGCTGTACGCCCACCACGTTGAGCTCAACGGCGCACCGAAATCCGGGATGTCATGA
Upstream 100 bases:
>100_bases CCTGGCGCTATCTGCGCACCAATGCGGCGTATCTGCTGCTGTTGCTGCGCGCCCGCCTCAGCCGACGCTACCGCGCGCGG GCGCTGACGACCTGGCCCAC
Downstream 100 bases:
>100_bases GGCCGTCCCAGCGCTCGGCTCTGCGTCGCGTCTAGAACCAGCCATGCCATCGCGCGCCTGCGCGCTGAGACCTTCGCTAC GCGCCGCCTACGCGTGCTGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 422; Mature: 421
Protein sequence:
>422_residues MTAGAPARQPAQTGLVAVCLGLYLLFCLQQVVLTGRYFGVGLSLGSMAIRGVALGLSAWALWRHGVPACLRWPLLSILLC MTALAASVLASDHSALAFKYAVRYATALLWLWALLNLAVAWPQWPRAAALAALIAVWINLALGMAVRLQWPPALEWSLAF HAQGSFKYLPRVSGMYDHPALLAATAVIVGLLTIQLYQRHAVGRAQLAAAVLAAIGALALSEVRNPLLPVAGLILWWAWS RRAGERPRRRTVWAAALGLLAVAGFVLWQRYAEMTSAVHESPLTAFSLGRTYLWSGAIEAWRSHPWFGLGAGVFQFLVPD YTGGRFDRGELHAHNGLLAVLSETGLCGLLACVCMLWALWAPLLRNPAERGWALIWLLFLLGLNVFDFYPLFYPFSLHAA LAVALLYAHHVELNGAPKSGMS
Sequences:
>Translated_422_residues MTAGAPARQPAQTGLVAVCLGLYLLFCLQQVVLTGRYFGVGLSLGSMAIRGVALGLSAWALWRHGVPACLRWPLLSILLC MTALAASVLASDHSALAFKYAVRYATALLWLWALLNLAVAWPQWPRAAALAALIAVWINLALGMAVRLQWPPALEWSLAF HAQGSFKYLPRVSGMYDHPALLAATAVIVGLLTIQLYQRHAVGRAQLAAAVLAAIGALALSEVRNPLLPVAGLILWWAWS RRAGERPRRRTVWAAALGLLAVAGFVLWQRYAEMTSAVHESPLTAFSLGRTYLWSGAIEAWRSHPWFGLGAGVFQFLVPD YTGGRFDRGELHAHNGLLAVLSETGLCGLLACVCMLWALWAPLLRNPAERGWALIWLLFLLGLNVFDFYPLFYPFSLHAA LAVALLYAHHVELNGAPKSGMS >Mature_421_residues TAGAPARQPAQTGLVAVCLGLYLLFCLQQVVLTGRYFGVGLSLGSMAIRGVALGLSAWALWRHGVPACLRWPLLSILLCM TALAASVLASDHSALAFKYAVRYATALLWLWALLNLAVAWPQWPRAAALAALIAVWINLALGMAVRLQWPPALEWSLAFH AQGSFKYLPRVSGMYDHPALLAATAVIVGLLTIQLYQRHAVGRAQLAAAVLAAIGALALSEVRNPLLPVAGLILWWAWSR RAGERPRRRTVWAAALGLLAVAGFVLWQRYAEMTSAVHESPLTAFSLGRTYLWSGAIEAWRSHPWFGLGAGVFQFLVPDY TGGRFDRGELHAHNGLLAVLSETGLCGLLACVCMLWALWAPLLRNPAERGWALIWLLFLLGLNVFDFYPLFYPFSLHAAL AVALLYAHHVELNGAPKSGMS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45914; Mature: 45783
Theoretical pI: Translated: 9.89; Mature: 9.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAGAPARQPAQTGLVAVCLGLYLLFCLQQVVLTGRYFGVGLSLGSMAIRGVALGLSAWA CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH LWRHGVPACLRWPLLSILLCMTALAASVLASDHSALAFKYAVRYATALLWLWALLNLAVA HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC WPQWPRAAALAALIAVWINLALGMAVRLQWPPALEWSLAFHAQGSFKYLPRVSGMYDHPA CCCCCHHHHHHHHHHHHHHHHHHHHEEECCCCCCCEEEEEECCCCCCCCCCCCCCCCCHH LLAATAVIVGLLTIQLYQRHAVGRAQLAAAVLAAIGALALSEVRNPLLPVAGLILWWAWS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH RRAGERPRRRTVWAAALGLLAVAGFVLWQRYAEMTSAVHESPLTAFSLGRTYLWSGAIEA HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCHHHHHHHHHHH WRSHPWFGLGAGVFQFLVPDYTGGRFDRGELHAHNGLLAVLSETGLCGLLACVCMLWALW HHCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHCCCHHHHHHCCCHHHHHHHHHHHHHHH APLLRNPAERGWALIWLLFLLGLNVFDFYPLFYPFSLHAALAVALLYAHHVELNGAPKSG HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCC MS CC >Mature Secondary Structure TAGAPARQPAQTGLVAVCLGLYLLFCLQQVVLTGRYFGVGLSLGSMAIRGVALGLSAWA CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH LWRHGVPACLRWPLLSILLCMTALAASVLASDHSALAFKYAVRYATALLWLWALLNLAVA HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC WPQWPRAAALAALIAVWINLALGMAVRLQWPPALEWSLAFHAQGSFKYLPRVSGMYDHPA CCCCCHHHHHHHHHHHHHHHHHHHHEEECCCCCCCEEEEEECCCCCCCCCCCCCCCCCHH LLAATAVIVGLLTIQLYQRHAVGRAQLAAAVLAAIGALALSEVRNPLLPVAGLILWWAWS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH RRAGERPRRRTVWAAALGLLAVAGFVLWQRYAEMTSAVHESPLTAFSLGRTYLWSGAIEA HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCHHHHHHHHHHH WRSHPWFGLGAGVFQFLVPDYTGGRFDRGELHAHNGLLAVLSETGLCGLLACVCMLWALW HHCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHCCCHHHHHHCCCHHHHHHHHHHHHHHH APLLRNPAERGWALIWLLFLLGLNVFDFYPLFYPFSLHAALAVALLYAHHVELNGAPKSG HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCC MS CC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA