| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21240808
Identifier: 21240808
GI number: 21240808
Start: 43807
End: 44220
Strand: Reverse
Name: 21240808
Synonym: XAC0034
Alternate gene names: NA
Gene position: 44220-43807 (Counterclockwise)
Preceding gene: 21240810
Following gene: 21240807
Centisome position: 0.85
GC content: 65.46
Gene sequence:
>414_bases ATGCTTGCGCGTCCCCCTTTGCTGGAGTCATCGATGCGCGCTGTCCTGCCTATTGCCCGCCTGGCTTGCACCCTGGTTGT GCTGACTGCATTGACTGCCTGCAACAAACCGCAACCCGATGAGCAGGAAGCCGTCACCGCCAAGGCCCAGCACGCGGCCG AACAAGCCTCTGCGCCCGCGCCGGATGCAGCGCCGGAAGCGCCGCCGATCGGCAGCTGCGATGCCACCCAGGTGCAATCG CTGGTGGGCCAGCCGTTGACCGATGCGGTGGGCGAACAGGCACGCAGCGACGCCGGCGCCAAGTCGGTGCGTGTGCTCAA GCCCGGCCAGATGACCACCATGGAATTCAATGGCGAACGGCTCAATCTGGAAGTGGACGCCAAGAACGTGATCAGCTCGG TGCGCTGCGGCTGA
Upstream 100 bases:
>100_bases AAGGACTGGCCGCGATTGTTGGGTGCAGCAAGACTAGGCTGCGTCAACGCAGCGACAACGCCGTGTGCGCAAGCCATGCC CGTCGCGTGACTTTGTGCTT
Downstream 100 bases:
>100_bases GACGGCGTTGGCGCCTGTCGCAAGACCGGCGCCAAGCCTTCTGGCACAAGGGATTGCAGTGTTTCTCGTTGCAGCTGTAA CGGTATATTGCGGCACCGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 137; Mature: 137
Protein sequence:
>137_residues MLARPPLLESSMRAVLPIARLACTLVVLTALTACNKPQPDEQEAVTAKAQHAAEQASAPAPDAAPEAPPIGSCDATQVQS LVGQPLTDAVGEQARSDAGAKSVRVLKPGQMTTMEFNGERLNLEVDAKNVISSVRCG
Sequences:
>Translated_137_residues MLARPPLLESSMRAVLPIARLACTLVVLTALTACNKPQPDEQEAVTAKAQHAAEQASAPAPDAAPEAPPIGSCDATQVQS LVGQPLTDAVGEQARSDAGAKSVRVLKPGQMTTMEFNGERLNLEVDAKNVISSVRCG >Mature_137_residues MLARPPLLESSMRAVLPIARLACTLVVLTALTACNKPQPDEQEAVTAKAQHAAEQASAPAPDAAPEAPPIGSCDATQVQS LVGQPLTDAVGEQARSDAGAKSVRVLKPGQMTTMEFNGERLNLEVDAKNVISSVRCG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14228; Mature: 14228
Theoretical pI: Translated: 4.85; Mature: 4.85
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLARPPLLESSMRAVLPIARLACTLVVLTALTACNKPQPDEQEAVTAKAQHAAEQASAPA CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCC PDAAPEAPPIGSCDATQVQSLVGQPLTDAVGEQARSDAGAKSVRVLKPGQMTTMEFNGER CCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHCCCCCCCEEEECCCCEEEEEECCCE LNLEVDAKNVISSVRCG EEEEECHHHHHHHHCCC >Mature Secondary Structure MLARPPLLESSMRAVLPIARLACTLVVLTALTACNKPQPDEQEAVTAKAQHAAEQASAPA CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCC PDAAPEAPPIGSCDATQVQSLVGQPLTDAVGEQARSDAGAKSVRVLKPGQMTTMEFNGER CCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHCCCCCCCEEEECCCCEEEEEECCCE LNLEVDAKNVISSVRCG EEEEECHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA