| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21240800
Identifier: 21240800
GI number: 21240800
Start: 28096
End: 29892
Strand: Direct
Name: 21240800
Synonym: XAC0026
Alternate gene names: NA
Gene position: 28096-29892 (Clockwise)
Preceding gene: 21240799
Following gene: 21240805
Centisome position: 0.54
GC content: 67.06
Gene sequence:
>1797_bases ATGCCCCGCAAGATCCTGTTGTGCCTGGCCGCGACGCTGGCCCTGGCCGGCTGCAAACGCGAACCCGCCGATGCGCCCAG CGCGCCTGCCGCGCAGACGCCGACCGATAGCGCGCCCAGCGCACCGGTCAGCCGCCACACCTTCTCCCCGGACATGACCA CTGGCGACTTCGCCGAACTGGTCAAGACGCTGGCGTCGGACGACTTCGAAGGCCGCGGCCCGGGGACGCCCGGCGAAGAA AAGACCGTGACCTACATTCGCGACCAGATGCAGCGCATCGGGCTGCAGCCCGGCAATGGCGACAGCTGGTTCCAGGAGGT GCCGATGGTGGAAACCACCGCCGATGCATCCACCGCCCCCAGCCTGCGCAGCGGCGAGCAGACCCGCACCCTCGCCTTCG GCACCGACATCGTGGTCGGCACCCGCACCGGGCAAGCCGAGGTCAAGCTGGACAACAGCGAGCTGGTGTTCGTCGGTTAC GGCGTGGATGCGCCCGAGCAGCAGTGGAACGACTACGCCGGCCAGGAATGGAAGGGCAAGACGGTGGTGATGTTCGTCAA CGACCCGGGCTTCCACACCGACGATGCCAAGTTGTTCGACGGCAAGCGCATGACCTACTACGGGCGCTGGACCTACAAGT TCGAAGAAGCCGCGCGCAAGGGCGCGGCTGCGGCGTTGATCGTGCACGACACGCCCGGTGCCAGCTATGGCTGGGACGTG GTGAAAAATTCTTGGTCCGGCCCGCAATACGACTTGCCGGCCAAGGACGACCCCGACCCGCGCCTGCCGGTGCAGGGCTG GATCAGCGCCGAGACCGCCAGGCAATTGTTCGCCAATGCCGGACTGGACCTGACGCAGGCCTACAAGGACGCCAGCAAGC GCGGCTTCAAGCCGGTGCCCTTGAAGGCCAGCTGGTCGGTCGACCTCAAGAGCACGATCGCGGCGAAGACCTCGCGCAAT GTGGTCGGCGTGCTGCCGGGCACCAGCCACGCCGACGAGGCGGTGCTGTACATGGCGCATTGGGACCACCTGGGCAAGCA TCCGGGTGAACGCGGCGACAACATCTACAACGGCGCGGTGGACAACGCCACCGGCGTGGCCGGCATCCTGGAAATCGCCG ACGCATTCGCCCATCAAGACCCCAAGCCGACGCGCTCGGTGGTGTTCCTGGCGGTGACGCTGGAAGAATCCGGCCTGCTG GGTTCCAAATACTACGTGGCCAACCCGAGCTTCCCGCTGGACAAGATCGCGGCGGTGATCAATCTGGATGCGATGTCGGT GGCCGGGCGCGCCCGCGATGTCACCGTGGTGGGGATGGGCAGCTCGGAGCTGGAGGACATCCTCAAGCCGATCGCCGCGA TGCAGGGGCGCACCCTGCACGCGGAAGCCACCCCGCAAAGCGGCTCGTATTTCCGTTCGGATCACTTCAACTTCGCCAAG GCCGGCGTGCCGGCGTTGTATGCCGATGGCGGCGAAGACCTGCGCGAGGGCGGCACTGCCGCCGGACGTGCCGCGGCCGA GGACTACGGACGCCATCGTTATCACGCGCCTGGCGACGAATACGACGCCGCCACCTGGAAGCTCGATGGCACCATCGAAG ATCTGCAGGTGGTCTATGGCGTGGGCAAGGAGGTCGCTGCTGGCGAACGTTGGCCCAACTGGTACCCCGGCAACCCGTTC AAGGCCGCGCGCGATCGCATGATGGCCGGCAGGCCTGGCACAAGTGCGGCGAGCGCGCAGCCGGCCGACGCCACCAGTAG GGCTACGCAGACGAACATGGCCAAGCCCCCACGCTGA
Upstream 100 bases:
>100_bases TGCCCGGCCCGCCATGCGACTGCAGCGCACGCAGCGACGCGCTCACCTCGCCATGCGGCGCAGGCTCTAAGATCGGGATT CCGCCGCACGAGGAGTTCCG
Downstream 100 bases:
>100_bases GGCTTGCCGATCCACTGCTGCCACACGGTGTAGCAGCAACGCACCAGCACACCAGCACTCCGGTTCGCGCCACCATCGGT GAGAATCTTCTGTTACGCAA
Product: hypothetical protein
Products: NA
Alternate protein names: Aminopeptidase; Peptidase; M28 Family Peptidase; Peptidase Family M; Glutamate Carboxypeptidase II; M20/M25/M40 Family Peptidase; Aminopeptidase Family; M28 Family Aminopeptidase; M23B Family Peptidase; WD40-Like Beta Propeller; Peptidase Family Protein; PDZ Domain-Containing Protein
Number of amino acids: Translated: 598; Mature: 597
Protein sequence:
>598_residues MPRKILLCLAATLALAGCKREPADAPSAPAAQTPTDSAPSAPVSRHTFSPDMTTGDFAELVKTLASDDFEGRGPGTPGEE KTVTYIRDQMQRIGLQPGNGDSWFQEVPMVETTADASTAPSLRSGEQTRTLAFGTDIVVGTRTGQAEVKLDNSELVFVGY GVDAPEQQWNDYAGQEWKGKTVVMFVNDPGFHTDDAKLFDGKRMTYYGRWTYKFEEAARKGAAAALIVHDTPGASYGWDV VKNSWSGPQYDLPAKDDPDPRLPVQGWISAETARQLFANAGLDLTQAYKDASKRGFKPVPLKASWSVDLKSTIAAKTSRN VVGVLPGTSHADEAVLYMAHWDHLGKHPGERGDNIYNGAVDNATGVAGILEIADAFAHQDPKPTRSVVFLAVTLEESGLL GSKYYVANPSFPLDKIAAVINLDAMSVAGRARDVTVVGMGSSELEDILKPIAAMQGRTLHAEATPQSGSYFRSDHFNFAK AGVPALYADGGEDLREGGTAAGRAAAEDYGRHRYHAPGDEYDAATWKLDGTIEDLQVVYGVGKEVAAGERWPNWYPGNPF KAARDRMMAGRPGTSAASAQPADATSRATQTNMAKPPR
Sequences:
>Translated_598_residues MPRKILLCLAATLALAGCKREPADAPSAPAAQTPTDSAPSAPVSRHTFSPDMTTGDFAELVKTLASDDFEGRGPGTPGEE KTVTYIRDQMQRIGLQPGNGDSWFQEVPMVETTADASTAPSLRSGEQTRTLAFGTDIVVGTRTGQAEVKLDNSELVFVGY GVDAPEQQWNDYAGQEWKGKTVVMFVNDPGFHTDDAKLFDGKRMTYYGRWTYKFEEAARKGAAAALIVHDTPGASYGWDV VKNSWSGPQYDLPAKDDPDPRLPVQGWISAETARQLFANAGLDLTQAYKDASKRGFKPVPLKASWSVDLKSTIAAKTSRN VVGVLPGTSHADEAVLYMAHWDHLGKHPGERGDNIYNGAVDNATGVAGILEIADAFAHQDPKPTRSVVFLAVTLEESGLL GSKYYVANPSFPLDKIAAVINLDAMSVAGRARDVTVVGMGSSELEDILKPIAAMQGRTLHAEATPQSGSYFRSDHFNFAK AGVPALYADGGEDLREGGTAAGRAAAEDYGRHRYHAPGDEYDAATWKLDGTIEDLQVVYGVGKEVAAGERWPNWYPGNPF KAARDRMMAGRPGTSAASAQPADATSRATQTNMAKPPR >Mature_597_residues PRKILLCLAATLALAGCKREPADAPSAPAAQTPTDSAPSAPVSRHTFSPDMTTGDFAELVKTLASDDFEGRGPGTPGEEK TVTYIRDQMQRIGLQPGNGDSWFQEVPMVETTADASTAPSLRSGEQTRTLAFGTDIVVGTRTGQAEVKLDNSELVFVGYG VDAPEQQWNDYAGQEWKGKTVVMFVNDPGFHTDDAKLFDGKRMTYYGRWTYKFEEAARKGAAAALIVHDTPGASYGWDVV KNSWSGPQYDLPAKDDPDPRLPVQGWISAETARQLFANAGLDLTQAYKDASKRGFKPVPLKASWSVDLKSTIAAKTSRNV VGVLPGTSHADEAVLYMAHWDHLGKHPGERGDNIYNGAVDNATGVAGILEIADAFAHQDPKPTRSVVFLAVTLEESGLLG SKYYVANPSFPLDKIAAVINLDAMSVAGRARDVTVVGMGSSELEDILKPIAAMQGRTLHAEATPQSGSYFRSDHFNFAKA GVPALYADGGEDLREGGTAAGRAAAEDYGRHRYHAPGDEYDAATWKLDGTIEDLQVVYGVGKEVAAGERWPNWYPGNPFK AARDRMMAGRPGTSAASAQPADATSRATQTNMAKPPR
Specific function: Unknown
COG id: COG2234
COG function: function code R; Predicted aminopeptidases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 64175; Mature: 64044
Theoretical pI: Translated: 5.28; Mature: 5.28
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRKILLCLAATLALAGCKREPADAPSAPAAQTPTDSAPSAPVSRHTFSPDMTTGDFAEL CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH VKTLASDDFEGRGPGTPGEEKTVTYIRDQMQRIGLQPGNGDSWFQEVPMVETTADASTAP HHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHCCCEEECCCCCCCC SLRSGEQTRTLAFGTDIVVGTRTGQAEVKLDNSELVFVGYGVDAPEQQWNDYAGQEWKGK CCCCCCCCEEEEECCEEEEECCCCCEEEEECCCCEEEEEECCCCCHHHHHHCCCCCCCCC TVVMFVNDPGFHTDDAKLFDGKRMTYYGRWTYKFEEAARKGAAAALIVHDTPGASYGWDV EEEEEECCCCCCCCCCEEECCCEEEEEEEEEEEHHHHHCCCCEEEEEEECCCCCCCCHHH VKNSWSGPQYDLPAKDDPDPRLPVQGWISAETARQLFANAGLDLTQAYKDASKRGFKPVP HHCCCCCCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCC LKASWSVDLKSTIAAKTSRNVVGVLPGTSHADEAVLYMAHWDHLGKHPGERGDNIYNGAV CCCCCCCCHHHHHHHHCCCCEEEECCCCCCCCCEEEEEEHHHHHHCCCCCCCCCCCCCCC DNATGVAGILEIADAFAHQDPKPTRSVVFLAVTLEESGLLGSKYYVANPSFPLDKIAAVI CCCCHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEECCCCCCCEEEEECCCCCHHHHHHHH NLDAMSVAGRARDVTVVGMGSSELEDILKPIAAMQGRTLHAEATPQSGSYFRSDHFNFAK CCHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCHHH AGVPALYADGGEDLREGGTAAGRAAAEDYGRHRYHAPGDEYDAATWKLDGTIEDLQVVYG CCCCEEECCCCHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCCEEEEECCCHHHHHHHHH VGKEVAAGERWPNWYPGNPFKAARDRMMAGRPGTSAASAQPADATSRATQTNMAKPPR CCCHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCCCCCC >Mature Secondary Structure PRKILLCLAATLALAGCKREPADAPSAPAAQTPTDSAPSAPVSRHTFSPDMTTGDFAEL CHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH VKTLASDDFEGRGPGTPGEEKTVTYIRDQMQRIGLQPGNGDSWFQEVPMVETTADASTAP HHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHCCCEEECCCCCCCC SLRSGEQTRTLAFGTDIVVGTRTGQAEVKLDNSELVFVGYGVDAPEQQWNDYAGQEWKGK CCCCCCCCEEEEECCEEEEECCCCCEEEEECCCCEEEEEECCCCCHHHHHHCCCCCCCCC TVVMFVNDPGFHTDDAKLFDGKRMTYYGRWTYKFEEAARKGAAAALIVHDTPGASYGWDV EEEEEECCCCCCCCCCEEECCCEEEEEEEEEEEHHHHHCCCCEEEEEEECCCCCCCCHHH VKNSWSGPQYDLPAKDDPDPRLPVQGWISAETARQLFANAGLDLTQAYKDASKRGFKPVP HHCCCCCCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCC LKASWSVDLKSTIAAKTSRNVVGVLPGTSHADEAVLYMAHWDHLGKHPGERGDNIYNGAV CCCCCCCCHHHHHHHHCCCCEEEECCCCCCCCCEEEEEEHHHHHHCCCCCCCCCCCCCCC DNATGVAGILEIADAFAHQDPKPTRSVVFLAVTLEESGLLGSKYYVANPSFPLDKIAAVI CCCCHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEECCCCCCCEEEEECCCCCHHHHHHHH NLDAMSVAGRARDVTVVGMGSSELEDILKPIAAMQGRTLHAEATPQSGSYFRSDHFNFAK CCHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCHHH AGVPALYADGGEDLREGGTAAGRAAAEDYGRHRYHAPGDEYDAATWKLDGTIEDLQVVYG CCCCEEECCCCHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCCEEEEECCCHHHHHHHHH VGKEVAAGERWPNWYPGNPFKAARDRMMAGRPGTSAASAQPADATSRATQTNMAKPPR CCCHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA