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The map label for this gene is 21240794

Identifier: 21240794

GI number: 21240794

Start: 21972

End: 22664

Strand: Direct

Name: 21240794

Synonym: XAC0020

Alternate gene names: NA

Gene position: 21972-22664 (Clockwise)

Preceding gene: 21240790

Following gene: 21240795

Centisome position: 0.42

GC content: 67.68

Gene sequence:

>693_bases
ATGTTCGTCTCTCTTCCTTCCCGCAAGAAACCCACCCCGCGCTGGGCGGTGCCGTTGCTGTTCGCCACGGTGTGGTTGGC
GTATTTGTGGTCGATCAGCCGGCCGGGCGAGGCGCGCAATACGTTGTGGCTGGACTGGGGCGCCCTGTCCAGCGGCGTCT
CCAATCTGGGCGACTGGTGGGCCACCTTGCGCGACGGCAGCGTGCTGCGCCTGTTCACGGCCCTGTTCCTGCACGCCGAC
TGGTCGCATCTGCTCGGCAACCTGGTGTTCCTGCTGATCTTCGGGCTGCCGGCCGAACGTATCCTGGGCCCGTGGCGGTT
GTTGCTGCTGTTTCTGGTTGGCGGCGCGGCCTCCAACCTGGCGGCGATCTTTGCCATCGGCACGCCGGACCGGGTGATCA
TCGGCGCCTCGGGTGCGGTGTCGGCGTTGATCGGCACGTACCTGGCGCTGTTTCCGGGCGCCAAGCTGGGCGTGGTCCTG
CCGCTGGGCGTGTTTCTGGAATTCATCCGGGTGCCGGCGCCGCTGTTGATCGGCGCCTGGGCACTGCTGCAGGTGGTGTT
CGCCTACATCGGCCCGGCGTTCGGCATGGTGGCGTGGTCGGCGCATATCGCCGGCTTCGTGTTCGGCATCGTGTACGGCC
TGTATGTGCGCGCGGCGATCGCGCGGCGGCTGCGCAAGCGCCACGGCTTCTGA

Upstream 100 bases:

>100_bases
TACCCATGACGATTAACCGAACAATAACAAGGCCTGTGCTGAACGCGCCGTCAGGTTAGGGCTGGGTTCAGCAGCGTGGA
CCGGCTATTGTCCCCGTCCG

Downstream 100 bases:

>100_bases
GGCGCGCAGCGCACCGGCTGTACCCGCAGGCCGCAACCCGGGCGTGGCCCAGTTACCGGCACGATGCCGCGCATGTCGCT
GTCCAGGCGCGCGCCTATAA

Product: hypothetical protein

Products: NA

Alternate protein names: Integral Membrane Protein; Peptidase; Rhomboid-Like Protein; S54 Family Peptidase; Rhomboid Serine Protease; Regulatory Proteins IclR; Rhomboid Family Transmembrane Protein; Membrane Associated Serine Protease; Subfamily; Integral Membrane Rhomboid Family Protein

Number of amino acids: Translated: 230; Mature: 230

Protein sequence:

>230_residues
MFVSLPSRKKPTPRWAVPLLFATVWLAYLWSISRPGEARNTLWLDWGALSSGVSNLGDWWATLRDGSVLRLFTALFLHAD
WSHLLGNLVFLLIFGLPAERILGPWRLLLLFLVGGAASNLAAIFAIGTPDRVIIGASGAVSALIGTYLALFPGAKLGVVL
PLGVFLEFIRVPAPLLIGAWALLQVVFAYIGPAFGMVAWSAHIAGFVFGIVYGLYVRAAIARRLRKRHGF

Sequences:

>Translated_230_residues
MFVSLPSRKKPTPRWAVPLLFATVWLAYLWSISRPGEARNTLWLDWGALSSGVSNLGDWWATLRDGSVLRLFTALFLHAD
WSHLLGNLVFLLIFGLPAERILGPWRLLLLFLVGGAASNLAAIFAIGTPDRVIIGASGAVSALIGTYLALFPGAKLGVVL
PLGVFLEFIRVPAPLLIGAWALLQVVFAYIGPAFGMVAWSAHIAGFVFGIVYGLYVRAAIARRLRKRHGF
>Mature_230_residues
MFVSLPSRKKPTPRWAVPLLFATVWLAYLWSISRPGEARNTLWLDWGALSSGVSNLGDWWATLRDGSVLRLFTALFLHAD
WSHLLGNLVFLLIFGLPAERILGPWRLLLLFLVGGAASNLAAIFAIGTPDRVIIGASGAVSALIGTYLALFPGAKLGVVL
PLGVFLEFIRVPAPLLIGAWALLQVVFAYIGPAFGMVAWSAHIAGFVFGIVYGLYVRAAIARRLRKRHGF

Specific function: Unknown

COG id: COG0705

COG function: function code R; Uncharacterized membrane protein (homolog of Drosophila rhomboid)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25049; Mature: 25049

Theoretical pI: Translated: 11.61; Mature: 11.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFVSLPSRKKPTPRWAVPLLFATVWLAYLWSISRPGEARNTLWLDWGALSSGVSNLGDWW
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHHHHHH
ATLRDGSVLRLFTALFLHADWSHLLGNLVFLLIFGLPAERILGPWRLLLLFLVGGAASNL
HHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHCC
AAIFAIGTPDRVIIGASGAVSALIGTYLALFPGAKLGVVLPLGVFLEFIRVPAPLLIGAW
EEEEEECCCCEEEEECCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHH
ALLQVVFAYIGPAFGMVAWSAHIAGFVFGIVYGLYVRAAIARRLRKRHGF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MFVSLPSRKKPTPRWAVPLLFATVWLAYLWSISRPGEARNTLWLDWGALSSGVSNLGDWW
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHHHHHH
ATLRDGSVLRLFTALFLHADWSHLLGNLVFLLIFGLPAERILGPWRLLLLFLVGGAASNL
HHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHCC
AAIFAIGTPDRVIIGASGAVSALIGTYLALFPGAKLGVVLPLGVFLEFIRVPAPLLIGAW
EEEEEECCCCEEEEECCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHH
ALLQVVFAYIGPAFGMVAWSAHIAGFVFGIVYGLYVRAAIARRLRKRHGF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA