| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is cls [H]
Identifier: 21240788
GI number: 21240788
Start: 14768
End: 16228
Strand: Reverse
Name: cls [H]
Synonym: XAC0014
Alternate gene names: 21240788
Gene position: 16228-14768 (Counterclockwise)
Preceding gene: 21240791
Following gene: 21240787
Centisome position: 0.31
GC content: 66.46
Gene sequence:
>1461_bases ATGCTCGCACTTGCACAGGGCGCGTGGGAGTGGCTGGCCACCATTCCCCACCTCGAAGCGCTCCTCCTCGCCGCCTATGT GCTGTACCTGCTATGGATCGCCGGCTGGATCGTGCTGCAGAAGCGCGAACCGGTGGCCACGCTGAGCTGGGTGTTGTCGC TGGCGGCGCTGCCGTACCTGGGGCTGCTGATCTACTACTGGCTCGGGCCGCAAAAGGTCAAACGGCAGCGGCTGCGGCGC GGGCGCTCGCGCTCGGGCATGGAGAGCTACAGCAGCGTCTGCCCGCCGGATGCCGATTGCACCGAGCTGGCCAAGATCGC CCAGTCCACCACCGGGCTAGCGCCCAGCAGCGCCACCGAAGTGCACTGGCTGGTGGATGGCGCTGCCACGTACGCCGCCA TCATCGAAGCGATCCGGGGCGCACGCGACCATATCCATCTGGAGTACTACATCTTCCAGCCCGACCACAGCGGCACCGCG ATCTGCGCTGCGCTGATGGAACGTGCCCGTGCCGGGGTCAAGGTGCGGCTGCTGATGGATGCGATCGGCTCATCGGCAAT GACCCGACGCGCCTTGCGCACGCTGCGCGAGGCCGGGGTGGAAACCGCCTGGTTCCACCCCTCGCAGTTGCTCAAGCCAT TCAAGCGGCCGTGGTTGAACCTGCGCACCCACCGCAAGGTGATCGTCATCGATGGCCGCATCGGTTTCACCGGTGGCATC AACGTCACCGACGACGAGAACGAGCAGGTGCGCAAGCAGGCGTATCGCGATCTGCACGTGCGCCTGCAAGGCCATGTAGT GCGCAGTCTGCAGCTGGTGTTCCTGGAGGATTGGCTCTATGCCACCAGCCAGGGCCGCGCAGCTTTCCACGGCCAGCAGC TATGGCCCGACGATATGCCCACCCGCGCGCAAGGCACGGTCGATGCGCAGGTGCTGGTGTCGGGTCCGGATTCGTCGTGG GAAGCGATCCACCGTCTGATGGTCGCCGCCATCCATGAAGCCAAGCACCGCGTGTGGCTGGTGACTCCATACTTCGTGCC CGGCGAGGCGGCGCGTATGGCGCTGACCTCGGCCGCGCTCGGCGGGCTGGACGTGCGCCTGTTGGTGCCGCGGGTCAGCG ATTCGCGCCTGGTCACCTACGCGGCACGCTCGTATTTCGACGAGCTGCTGGAAGCCGGTGTCCGCATCTACGAGTACGGG CCGCGCATGCTGCACACCAAGGCGCTGCTGGCCGACGACGATGTCTGCATCGTCGGCAGCGCCAATTTCGACAGCCGCAG CTTCCGGCTGAATTTCGAGCTGTCGATGCTGTTCCGCGACCAGGCCGTGGCGGCAGAGATGGCCGGGCTGATCGGCACCG ATCTGCAACAGGCGCAGGAAGTGCAATTCGCGCGACACCGGCCGTTATGGCGCTCGCGCCTGCCCGAAGCGTTTGCCCGG CTGCTGTCGCCGCTGCTCTGA
Upstream 100 bases:
>100_bases AGCACCCTGCGAACAATCACGCGCGATCATCGGAGCTCGAGCAGCACTGCGGCAGTCCAGGCGCCCGTCAGACCGCTGCA GCGGCTCTTAGAATCCGCGC
Downstream 100 bases:
>100_bases CCAACGGTGCGGTGCCCACGTGGAACCGCGCCGGGCGCGGCGCTACACTGCCGCCACTCAACGGGGAGCTCGTCATGCAC TGGCTGTTTCTGCTTATGGC
Product: cardiolipin synthetase
Products: Biphosphatidylglycerol; Glycerol. [C]
Alternate protein names: CL synthase [H]
Number of amino acids: Translated: 486; Mature: 486
Protein sequence:
>486_residues MLALAQGAWEWLATIPHLEALLLAAYVLYLLWIAGWIVLQKREPVATLSWVLSLAALPYLGLLIYYWLGPQKVKRQRLRR GRSRSGMESYSSVCPPDADCTELAKIAQSTTGLAPSSATEVHWLVDGAATYAAIIEAIRGARDHIHLEYYIFQPDHSGTA ICAALMERARAGVKVRLLMDAIGSSAMTRRALRTLREAGVETAWFHPSQLLKPFKRPWLNLRTHRKVIVIDGRIGFTGGI NVTDDENEQVRKQAYRDLHVRLQGHVVRSLQLVFLEDWLYATSQGRAAFHGQQLWPDDMPTRAQGTVDAQVLVSGPDSSW EAIHRLMVAAIHEAKHRVWLVTPYFVPGEAARMALTSAALGGLDVRLLVPRVSDSRLVTYAARSYFDELLEAGVRIYEYG PRMLHTKALLADDDVCIVGSANFDSRSFRLNFELSMLFRDQAVAAEMAGLIGTDLQQAQEVQFARHRPLWRSRLPEAFAR LLSPLL
Sequences:
>Translated_486_residues MLALAQGAWEWLATIPHLEALLLAAYVLYLLWIAGWIVLQKREPVATLSWVLSLAALPYLGLLIYYWLGPQKVKRQRLRR GRSRSGMESYSSVCPPDADCTELAKIAQSTTGLAPSSATEVHWLVDGAATYAAIIEAIRGARDHIHLEYYIFQPDHSGTA ICAALMERARAGVKVRLLMDAIGSSAMTRRALRTLREAGVETAWFHPSQLLKPFKRPWLNLRTHRKVIVIDGRIGFTGGI NVTDDENEQVRKQAYRDLHVRLQGHVVRSLQLVFLEDWLYATSQGRAAFHGQQLWPDDMPTRAQGTVDAQVLVSGPDSSW EAIHRLMVAAIHEAKHRVWLVTPYFVPGEAARMALTSAALGGLDVRLLVPRVSDSRLVTYAARSYFDELLEAGVRIYEYG PRMLHTKALLADDDVCIVGSANFDSRSFRLNFELSMLFRDQAVAAEMAGLIGTDLQQAQEVQFARHRPLWRSRLPEAFAR LLSPLL >Mature_486_residues MLALAQGAWEWLATIPHLEALLLAAYVLYLLWIAGWIVLQKREPVATLSWVLSLAALPYLGLLIYYWLGPQKVKRQRLRR GRSRSGMESYSSVCPPDADCTELAKIAQSTTGLAPSSATEVHWLVDGAATYAAIIEAIRGARDHIHLEYYIFQPDHSGTA ICAALMERARAGVKVRLLMDAIGSSAMTRRALRTLREAGVETAWFHPSQLLKPFKRPWLNLRTHRKVIVIDGRIGFTGGI NVTDDENEQVRKQAYRDLHVRLQGHVVRSLQLVFLEDWLYATSQGRAAFHGQQLWPDDMPTRAQGTVDAQVLVSGPDSSW EAIHRLMVAAIHEAKHRVWLVTPYFVPGEAARMALTSAALGGLDVRLLVPRVSDSRLVTYAARSYFDELLEAGVRIYEYG PRMLHTKALLADDDVCIVGSANFDSRSFRLNFELSMLFRDQAVAAEMAGLIGTDLQQAQEVQFARHRPLWRSRLPEAFAR LLSPLL
Specific function: Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol [H]
COG id: COG1502
COG function: function code I; Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 PLD phosphodiesterase domains [H]
Homologues:
Organism=Escherichia coli, GI1787502, Length=487, Percent_Identity=29.7741273100616, Blast_Score=218, Evalue=6e-58, Organism=Escherichia coli, GI1787007, Length=355, Percent_Identity=30.9859154929577, Blast_Score=142, Evalue=4e-35,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022924 - InterPro: IPR001736 [H]
Pfam domain/function: PF00614 PLDc [H]
EC number: 2.7.8.- [C]
Molecular weight: Translated: 54496; Mature: 54496
Theoretical pI: Translated: 9.17; Mature: 9.17
Prosite motif: PS50035 PLD
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLALAQGAWEWLATIPHLEALLLAAYVLYLLWIAGWIVLQKREPVATLSWVLSLAALPYL CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHH GLLIYYWLGPQKVKRQRLRRGRSRSGMESYSSVCPPDADCTELAKIAQSTTGLAPSSATE HHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCE VHWLVDGAATYAAIIEAIRGARDHIHLEYYIFQPDHSGTAICAALMERARAGVKVRLLMD EEEEECCHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHCCCEEEEHHH AIGSSAMTRRALRTLREAGVETAWFHPSQLLKPFKRPWLNLRTHRKVIVIDGRIGFTGGI HHCCHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCC NVTDDENEQVRKQAYRDLHVRLQGHVVRSLQLVFLEDWLYATSQGRAAFHGQQLWPDDMP CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCC TRAQGTVDAQVLVSGPDSSWEAIHRLMVAAIHEAKHRVWLVTPYFVPGEAARMALTSAAL CCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHHHH GGLDVRLLVPRVSDSRLVTYAARSYFDELLEAGVRIYEYGPRMLHTKALLADDDVCIVGS CCCEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHCCCCCEEEEEC ANFDSRSFRLNFELSMLFRDQAVAAEMAGLIGTDLQQAQEVQFARHRPLWRSRLPEAFAR CCCCCCEEEEEEEEEEEHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHH LLSPLL HHHCCC >Mature Secondary Structure MLALAQGAWEWLATIPHLEALLLAAYVLYLLWIAGWIVLQKREPVATLSWVLSLAALPYL CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHH GLLIYYWLGPQKVKRQRLRRGRSRSGMESYSSVCPPDADCTELAKIAQSTTGLAPSSATE HHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCE VHWLVDGAATYAAIIEAIRGARDHIHLEYYIFQPDHSGTAICAALMERARAGVKVRLLMD EEEEECCHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHCCCEEEEHHH AIGSSAMTRRALRTLREAGVETAWFHPSQLLKPFKRPWLNLRTHRKVIVIDGRIGFTGGI HHCCHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCC NVTDDENEQVRKQAYRDLHVRLQGHVVRSLQLVFLEDWLYATSQGRAAFHGQQLWPDDMP CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCC TRAQGTVDAQVLVSGPDSSWEAIHRLMVAAIHEAKHRVWLVTPYFVPGEAARMALTSAAL CCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHHHH GGLDVRLLVPRVSDSRLVTYAARSYFDELLEAGVRIYEYGPRMLHTKALLADDDVCIVGS CCCEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHCCCCCEEEEEC ANFDSRSFRLNFELSMLFRDQAVAAEMAGLIGTDLQQAQEVQFARHRPLWRSRLPEAFAR CCCCCCEEEEEEEEEEEHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHH LLSPLL HHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Phosphatidylglycerol [C]
Specific reaction: 2 Phosphatidylglycerol = Biphosphatidylglycerol + Glycerol. [C]
General reaction: Transferring phosphorus-containing groups [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9443601 [H]