| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is mntR [H]
Identifier: 161485712
GI number: 161485712
Start: 2382200
End: 2382667
Strand: Direct
Name: mntR [H]
Synonym: XAC2037
Alternate gene names: 161485712
Gene position: 2382200-2382667 (Clockwise)
Preceding gene: 21242778
Following gene: 21242782
Centisome position: 46.03
GC content: 68.16
Gene sequence:
>468_bases GTGGGCAAGAGCGAAAAGGTGGAAGCGGCCGCGCCGGTCCTGATCGATGCGCAGGTGCACATGGAGAGCTTCCGTCAGGT GCGCGAAGCGCGCCGCGCCGAGCTGGTCGAAGACTACGTAGAGCTGATCTCGGATCTGCTGGTGGATGGCGGCGAGGCAC GTCAGGTCGATATCGCTGCGCGCCTGGGCGTAGCGCAGCCCACCGTGGCCAAGATGCTCAAGCGGCTAGTGCGCGATGGT TGGGTCGTGCAGCGGCCCTACCGTGGGGTGTTCCTGACCCCGGCCGGTGAGGCGCTGGCCGCATCCAGCCGGCAGCGCCA CCAGATCGTGGAGCGCTTCCTGCTTGCGCTGGGCATCGATGAAGCCACCGCGCGTCGCGACGCGGAGGGCATCGAACACC ATGTCAGCGAAGCCACGGTTGCCGCGTTCGCCGCGTTCCTCGACCGCCAGGGCGGTTCGGCCACGTGA
Upstream 100 bases:
>100_bases CTATGCTGTTGAGCATTGGCAATTTCAATCGTATTGATCTGCTGTGTGCTTCAAACTATGCGTCCCGGCATCGACGCCGG CGACGATGACGAGGAAGAGG
Downstream 100 bases:
>100_bases GCATGCCCACCGATGCGCCGACCGATACGCCGCACGCGGCGATCGACGTGCACTGGATGCAGCACGCCTTGCAATTGGCC GAGCGTGCCGAGCGCGACTA
Product: manganese transport regulator MntR
Products: NA
Alternate protein names: Manganese transport regulator [H]
Number of amino acids: Translated: 155; Mature: 154
Protein sequence:
>155_residues MGKSEKVEAAAPVLIDAQVHMESFRQVREARRAELVEDYVELISDLLVDGGEARQVDIAARLGVAQPTVAKMLKRLVRDG WVVQRPYRGVFLTPAGEALAASSRQRHQIVERFLLALGIDEATARRDAEGIEHHVSEATVAAFAAFLDRQGGSAT
Sequences:
>Translated_155_residues MGKSEKVEAAAPVLIDAQVHMESFRQVREARRAELVEDYVELISDLLVDGGEARQVDIAARLGVAQPTVAKMLKRLVRDG WVVQRPYRGVFLTPAGEALAASSRQRHQIVERFLLALGIDEATARRDAEGIEHHVSEATVAAFAAFLDRQGGSAT >Mature_154_residues GKSEKVEAAAPVLIDAQVHMESFRQVREARRAELVEDYVELISDLLVDGGEARQVDIAARLGVAQPTVAKMLKRLVRDGW VVQRPYRGVFLTPAGEALAASSRQRHQIVERFLLALGIDEATARRDAEGIEHHVSEATVAAFAAFLDRQGGSAT
Specific function: In the presence of manganese, it represses the manganese transporter mntH [H]
COG id: COG1321
COG function: function code K; Mn-dependent transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic [H]
Metaboloic importance: Non Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HTH dtxR-type DNA-binding domain [H]
Homologues:
Organism=Escherichia coli, GI1787038, Length=138, Percent_Identity=64.4927536231884, Blast_Score=178, Evalue=1e-46,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001367 - InterPro: IPR022689 - InterPro: IPR022687 - InterPro: IPR011991 [H]
Pfam domain/function: PF02742 Fe_dep_repr_C; PF01325 Fe_dep_repress [H]
EC number: NA
Molecular weight: Translated: 16946; Mature: 16814
Theoretical pI: Translated: 6.12; Mature: 6.12
Prosite motif: PS50944 HTH_DTXR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGKSEKVEAAAPVLIDAQVHMESFRQVREARRAELVEDYVELISDLLVDGGEARQVDIAA CCCCCCHHHHCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH RLGVAQPTVAKMLKRLVRDGWVVQRPYRGVFLTPAGEALAASSRQRHQIVERFLLALGID HHCCCCHHHHHHHHHHHHCCCEEECCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHCCC EATARRDAEGIEHHVSEATVAAFAAFLDRQGGSAT HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure GKSEKVEAAAPVLIDAQVHMESFRQVREARRAELVEDYVELISDLLVDGGEARQVDIAA CCCCCHHHHCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH RLGVAQPTVAKMLKRLVRDGWVVQRPYRGVFLTPAGEALAASSRQRHQIVERFLLALGID HHCCCCHHHHHHHHHHHHCCCEEECCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHCCC EATARRDAEGIEHHVSEATVAAFAAFLDRQGGSAT HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11677608; 12644504 [H]