| Definition | Campylobacter jejuni RM1221, complete genome. |
|---|---|
| Accession | NC_003912 |
| Length | 1,777,831 |
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The map label for this gene is 57238685
Identifier: 57238685
GI number: 57238685
Start: 1736239
End: 1737099
Strand: Direct
Name: 57238685
Synonym: CJE1846
Alternate gene names: NA
Gene position: 1736239-1737099 (Clockwise)
Preceding gene: 57238676
Following gene: 57238686
Centisome position: 97.66
GC content: 32.17
Gene sequence:
>861_bases ATGAAAAAAATTACTATTGCACATTCTCCTGATGCTGATGATATTTTTATGTATATGGCTATTAAATTTGGGTGGATAGG GAATGATTTTGCTTATGAAAATACAGCTTTAGATATACAAACTTTAAATGAATTTGCCTTGAAAAATGAATTTGATGCTA CGGCTATTTCTTTTGGGCTTTATCCTTTAATCGCTTCTGAGTATGCGCTTTTACGCACAGCAGTGAGTTTTGGTGAAGGT TATGGGCCAAAACTCATCAAGAAAAAAGACACGCATTTAAAAAGAAATTTTAAAGTCGCTTTGAGTGGAGCAAATACCAC CAATGCTTTGATTTTTCGTATGAAATACCCTGAAGCAAGAATTATTTATAAGAATTTTTTAGACATTGAAAATGTAGTTT TAAGTGGCGAAGTAGATGCAGGAGTTTTGATCCATGAAAGCATTTTAGAATTTAATCAAAGTCTTTGCGTGGAAGCAGAA ATTTGGGATATATGGCTTGAATTTGCTAAAGAAAATTTGCCTTTGCCTTTAGGTGGAATGGCTTTGCGTCGTTCTTTGCC TTTAAGCGATGCGATTAAGATCGAAAGAGATTTAACCAATGCTGTAAAAATTGCCGATGCAAATCGTAAAATTTTAGCCC CTATGCTTATGGAAAGAAAACTTATCCGTGTTGATGAAGAAAAACTTGATACTTATCTTAATTTATATGCCAATAAAAAC TCTATTAGCATGAATCAAACTCAACTTTTAGCTGTAGATACGCTTTTTAAACTAGGATATGATTATAAATTTTATGATAA AATCATACATGTAAATGATTATCTTATCCCTAGCGAATACGAAGAAGCTAGAAATTCTTAA
Upstream 100 bases:
>100_bases TCCTTAAAAATTCTAAATTTTTAGTTAGAATTCTAACAAAATAAAATTAAATAATGATTTATTTTGCTAGAATTAAAGCA AAGATTTAAAGGAAGCATAG
Downstream 100 bases:
>100_bases AAAGGATAAAAATGGACGAAAGTACCTTAGTTGCTCTTGGAGTGCAAACCTTTAAAATCACACTTTTACTTTCCTTGCCT ATGCTTTTGGCAGGACTTAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 286; Mature: 286
Protein sequence:
>286_residues MKKITIAHSPDADDIFMYMAIKFGWIGNDFAYENTALDIQTLNEFALKNEFDATAISFGLYPLIASEYALLRTAVSFGEG YGPKLIKKKDTHLKRNFKVALSGANTTNALIFRMKYPEARIIYKNFLDIENVVLSGEVDAGVLIHESILEFNQSLCVEAE IWDIWLEFAKENLPLPLGGMALRRSLPLSDAIKIERDLTNAVKIADANRKILAPMLMERKLIRVDEEKLDTYLNLYANKN SISMNQTQLLAVDTLFKLGYDYKFYDKIIHVNDYLIPSEYEEARNS
Sequences:
>Translated_286_residues MKKITIAHSPDADDIFMYMAIKFGWIGNDFAYENTALDIQTLNEFALKNEFDATAISFGLYPLIASEYALLRTAVSFGEG YGPKLIKKKDTHLKRNFKVALSGANTTNALIFRMKYPEARIIYKNFLDIENVVLSGEVDAGVLIHESILEFNQSLCVEAE IWDIWLEFAKENLPLPLGGMALRRSLPLSDAIKIERDLTNAVKIADANRKILAPMLMERKLIRVDEEKLDTYLNLYANKN SISMNQTQLLAVDTLFKLGYDYKFYDKIIHVNDYLIPSEYEEARNS >Mature_286_residues MKKITIAHSPDADDIFMYMAIKFGWIGNDFAYENTALDIQTLNEFALKNEFDATAISFGLYPLIASEYALLRTAVSFGEG YGPKLIKKKDTHLKRNFKVALSGANTTNALIFRMKYPEARIIYKNFLDIENVVLSGEVDAGVLIHESILEFNQSLCVEAE IWDIWLEFAKENLPLPLGGMALRRSLPLSDAIKIERDLTNAVKIADANRKILAPMLMERKLIRVDEEKLDTYLNLYANKN SISMNQTQLLAVDTLFKLGYDYKFYDKIIHVNDYLIPSEYEEARNS
Specific function: Unknown
COG id: COG2107
COG function: function code R; Predicted periplasmic solute-binding protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32643; Mature: 32643
Theoretical pI: Translated: 5.09; Mature: 5.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKITIAHSPDADDIFMYMAIKFGWIGNDFAYENTALDIQTLNEFALKNEFDATAISFGL CCEEEEECCCCCCCEEEEEEEEECCCCCCCCCCCCEEEHHHHHHHHHCCCCCCHHHHHHH YPLIASEYALLRTAVSFGEGYGPKLIKKKDTHLKRNFKVALSGANTTNALIFRMKYPEAR HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCEEEEEECCCCCEEEEEEEECCCCE IIYKNFLDIENVVLSGEVDAGVLIHESILEFNQSLCVEAEIWDIWLEFAKENLPLPLGGM EHHHHHCCHHHEEEECCCCCCHHHHHHHHHHCHHHEEEHHHHHHHHHHHHCCCCCCCCCH ALRRSLPLSDAIKIERDLTNAVKIADANRKILAPMLMERKLIRVDEEKLDTYLNLYANKN HHHHCCCCHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHCCHHHHHHHHHEEECCC SISMNQTQLLAVDTLFKLGYDYKFYDKIIHVNDYLIPSEYEEARNS CCCCCHHHHHHHHHHHHHCCCEEHHHEEEEECCEECCCCHHHHCCC >Mature Secondary Structure MKKITIAHSPDADDIFMYMAIKFGWIGNDFAYENTALDIQTLNEFALKNEFDATAISFGL CCEEEEECCCCCCCEEEEEEEEECCCCCCCCCCCCEEEHHHHHHHHHCCCCCCHHHHHHH YPLIASEYALLRTAVSFGEGYGPKLIKKKDTHLKRNFKVALSGANTTNALIFRMKYPEAR HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCEEEEEECCCCCEEEEEEEECCCCE IIYKNFLDIENVVLSGEVDAGVLIHESILEFNQSLCVEAEIWDIWLEFAKENLPLPLGGM EHHHHHCCHHHEEEECCCCCCHHHHHHHHHHCHHHEEEHHHHHHHHHHHHCCCCCCCCCH ALRRSLPLSDAIKIERDLTNAVKIADANRKILAPMLMERKLIRVDEEKLDTYLNLYANKN HHHHCCCCHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHCCHHHHHHHHHEEECCC SISMNQTQLLAVDTLFKLGYDYKFYDKIIHVNDYLIPSEYEEARNS CCCCCHHHHHHHHHHHHHCCCEEHHHEEEEECCEECCCCHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA