| Definition | Campylobacter jejuni RM1221, complete genome. |
|---|---|
| Accession | NC_003912 |
| Length | 1,777,831 |
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The map label for this gene is btuC [C]
Identifier: 57238628
GI number: 57238628
Start: 1684085
End: 1685071
Strand: Direct
Name: btuC [C]
Synonym: CJE1787
Alternate gene names: 57238628
Gene position: 1684085-1685071 (Clockwise)
Preceding gene: 57238627
Following gene: 57238629
Centisome position: 94.73
GC content: 32.52
Gene sequence:
>987_bases ATGTTGAATTTAAATACGCATTCTAAAATTTTAGTGATTATAGGGCTTTTGGTAGCTTATATAATCGCTTCTTTTATAGC ACTTTGCTTAGGAGATGAGAATTTAAACCCAAAAGAACTTTTTTCATATATCTTTAGCCAAGATGAAATTTTAAGACAAA TCATCATAGATGGACGCTTACCACGCATTATAATGGCGATTTTAATCGGTATGCTTTTAGCTAGTAGTGGGGCTATCACT CAAAATGTATTTTCAAATCCTATAGCTGATCCTTATATCATAGGTATAGCTTCTGCGGCAACCTTTGGAGCGGTTTTGGC GTATTTGTTAAAATTGAATGATTATTATTATGGAATTTTAGGTTTTGTTTGCTCTGCCTTTTTTGCCCTAGGAGTTTTTA AAATTTCTTCTAAAGCTTCTATAGCAACTTTACTCATTATCGGCATAGCAGCTTCATCTTTTTTAGGGGCTTTTACTTCT TTTTTCACTTATCTTATAGGCGAGGATTCTTTTAAAATAGTCGCTTGGCTTATGGGAAATATAGGCAATGCTTCTTGGTT TCGTGTGGGAATTTTAATCTTACCTTTAATTTTTTGTTTGTTTTATTTTTACGCTCATAAAAACGAATTAAACATACTTT TAAGCGGAGATGATGAAGCTAGAAATCTAGGGGTAAATGCTCAAAAATTAAAGATAAATTTACTCATTGTCTCATCCTTG GCTGTATCTTTTGCGGTTGCTTTTAGCGGACTTATAGGCTTTGTTGGACTCATCATTCCTCATACTATAAGACTTTTGCT TAAAAATTATGACAATGCCTTGGTTATCCCTTTATGTACAGCATTTGGAGGATTATTTTTACTTATTTGTGATACTTTAG CAAGAACTCTTTTAACCCCTGTACAAATTCCGATTGGAATTTTAACTGCATTTTTTGGAGCTCCTATTTTTTTATACTTG GCTTTAAGTGCTAGGAGATTTTTATAA
Upstream 100 bases:
>100_bases CAAATTTTAGCAGGAATTCGCAATCTTTTCGATAAAAGATACTACACCTATCAAGACAGTATAAATGATCAATACCTAGT TGGGAATGGCAGAAACTACT
Downstream 100 bases:
>100_bases TGCTAAAAATACAAGATTTAAGCTTTGCTTATCACCAAAAAGATTTACTAAAAAACATTCATTTAGAACTTAAAAATCGG GCTTTTATAGGAATTTTAGG
Product: hemin ABC transporter permease
Products: ADP; phosphate; cob(I)alamin [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 328; Mature: 328
Protein sequence:
>328_residues MLNLNTHSKILVIIGLLVAYIIASFIALCLGDENLNPKELFSYIFSQDEILRQIIIDGRLPRIIMAILIGMLLASSGAIT QNVFSNPIADPYIIGIASAATFGAVLAYLLKLNDYYYGILGFVCSAFFALGVFKISSKASIATLLIIGIAASSFLGAFTS FFTYLIGEDSFKIVAWLMGNIGNASWFRVGILILPLIFCLFYFYAHKNELNILLSGDDEARNLGVNAQKLKINLLIVSSL AVSFAVAFSGLIGFVGLIIPHTIRLLLKNYDNALVIPLCTAFGGLFLLICDTLARTLLTPVQIPIGILTAFFGAPIFLYL ALSARRFL
Sequences:
>Translated_328_residues MLNLNTHSKILVIIGLLVAYIIASFIALCLGDENLNPKELFSYIFSQDEILRQIIIDGRLPRIIMAILIGMLLASSGAIT QNVFSNPIADPYIIGIASAATFGAVLAYLLKLNDYYYGILGFVCSAFFALGVFKISSKASIATLLIIGIAASSFLGAFTS FFTYLIGEDSFKIVAWLMGNIGNASWFRVGILILPLIFCLFYFYAHKNELNILLSGDDEARNLGVNAQKLKINLLIVSSL AVSFAVAFSGLIGFVGLIIPHTIRLLLKNYDNALVIPLCTAFGGLFLLICDTLARTLLTPVQIPIGILTAFFGAPIFLYL ALSARRFL >Mature_328_residues MLNLNTHSKILVIIGLLVAYIIASFIALCLGDENLNPKELFSYIFSQDEILRQIIIDGRLPRIIMAILIGMLLASSGAIT QNVFSNPIADPYIIGIASAATFGAVLAYLLKLNDYYYGILGFVCSAFFALGVFKISSKASIATLLIIGIAASSFLGAFTS FFTYLIGEDSFKIVAWLMGNIGNASWFRVGILILPLIFCLFYFYAHKNELNILLSGDDEARNLGVNAQKLKINLLIVSSL AVSFAVAFSGLIGFVGLIIPHTIRLLLKNYDNALVIPLCTAFGGLFLLICDTLARTLLTPVQIPIGILTAFFGAPIFLYL ALSARRFL
Specific function: Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0609
COG function: function code P; ABC-type Fe3+-siderophore transport system, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily [H]
Homologues:
Organism=Escherichia coli, GI1788004, Length=303, Percent_Identity=31.6831683168317, Blast_Score=132, Evalue=2e-32, Organism=Escherichia coli, GI1790740, Length=275, Percent_Identity=30.5454545454545, Blast_Score=110, Evalue=2e-25, Organism=Escherichia coli, GI1790741, Length=274, Percent_Identity=32.1167883211679, Blast_Score=106, Evalue=2e-24, Organism=Escherichia coli, GI1786347, Length=317, Percent_Identity=29.3375394321767, Blast_Score=100, Evalue=1e-22, Organism=Escherichia coli, GI1786804, Length=320, Percent_Identity=26.875, Blast_Score=82, Evalue=5e-17, Organism=Escherichia coli, GI1786805, Length=282, Percent_Identity=27.6595744680851, Blast_Score=75, Evalue=6e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000522 [H]
Pfam domain/function: PF01032 FecCD [H]
EC number: NA
Molecular weight: Translated: 35687; Mature: 35687
Theoretical pI: Translated: 8.44; Mature: 8.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLNLNTHSKILVIIGLLVAYIIASFIALCLGDENLNPKELFSYIFSQDEILRQIIIDGRL CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCHHHHHHHHHHCCCH PRIIMAILIGMLLASSGAITQNVFSNPIADPYIIGIASAATFGAVLAYLLKLNDYYYGIL HHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GFVCSAFFALGVFKISSKASIATLLIIGIAASSFLGAFTSFFTYLIGEDSFKIVAWLMGN HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCC IGNASWFRVGILILPLIFCLFYFYAHKNELNILLSGDDEARNLGVNAQKLKINLLIVSSL CCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHCCCCHHHEEEEEEHHHHH AVSFAVAFSGLIGFVGLIIPHTIRLLLKNYDNALVIPLCTAFGGLFLLICDTLARTLLTP HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCH VQIPIGILTAFFGAPIFLYLALSARRFL HHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MLNLNTHSKILVIIGLLVAYIIASFIALCLGDENLNPKELFSYIFSQDEILRQIIIDGRL CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCHHHHHHHHHHCCCH PRIIMAILIGMLLASSGAITQNVFSNPIADPYIIGIASAATFGAVLAYLLKLNDYYYGIL HHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GFVCSAFFALGVFKISSKASIATLLIIGIAASSFLGAFTSFFTYLIGEDSFKIVAWLMGN HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCC IGNASWFRVGILILPLIFCLFYFYAHKNELNILLSGDDEARNLGVNAQKLKINLLIVSSL CCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHCCCCHHHEEEEEEHHHHH AVSFAVAFSGLIGFVGLIIPHTIRLLLKNYDNALVIPLCTAFGGLFLLICDTLARTLLTP HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCH VQIPIGILTAFFGAPIFLYLALSARRFL HHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; cob(I)alamin [Periplasm]; H2O [C]
Specific reaction: ATP + cob(I)alamin [Periplasm] + H2O = ADP + phosphate + cob(I)alamin [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]