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The map label for this gene is yedE [H]

Identifier: 57238523

GI number: 57238523

Start: 1571172

End: 1572380

Strand: Direct

Name: yedE [H]

Synonym: CJE1673

Alternate gene names: 57238523

Gene position: 1571172-1572380 (Clockwise)

Preceding gene: 57238522

Following gene: 57238524

Centisome position: 88.38

GC content: 31.27

Gene sequence:

>1209_bases
TTGAATTCTTTTAAACAAAAATATTTAATCAATTTTTGGGACAATTCCCGTTCTATGATTGCACTTGGAATTTTAAGTGC
AGTGTATTTTGGGATTTTTGGTGGCGTTTGGGCTGTTACTGGAGAAATGACACGTTGGGGTGGCGAGTTTTTAGAGCTTT
TAGGTATGAATTTAGATGGATATTCTTATTACCAAAAGCAAAATTTAAATGGAACCCCTTTAACAAGAACTGATGGTATT
ATGCTCATAGGTATGTTTATAGGTTGTTTAGTAGCCGCACTTTTAGCTAACAAAGTCAAATTTCGTCTACCTGCTAGCAA
TATAAGAATTTTTCAAGCAATAGTAGGTGGAATTCTTTCAGGATATGGAGCAAGACTTGCATTTGGATGCAATTTAGCTA
ATTTTTTTACAGGTTTACCTTATTTTTCTTTACACACTTGGCTTTTTACTGTTTTTATGGTTTTAGGAATTTATCTAGGA
GTGAAAATTTGCAACACTTCCTTTTTTAAACCTAAAGCTAAATTAGAACGTGTAAATAAAGAAAACTTGCCGTTAAACAA
GCAAAGTTTGCGTACAAAATTATATTTTAACTTAGGCATATTGCTTTTCATAGCCTTTTTAGTTTGGGTGTTTTATCTTG
TTTTTACAAATGGCAATATCAGCACACAAAACAAACAAAGTCTTCTAGCTTTAGCACTGATTTTTGGTTTTGTTTTTGGC
TTTGTTATTTCTAGAGGGCAAATTTGTTTTACTTCTTGCTTTAGAGATTTATTTTTATTTGGTAGAGATAATGCTATAAA
AGGCGCATTAATCGGTATGATTATCGCCTCTTTAATCGCTTTTGCTTTTATCTTGCAGGGTCATACTAGTAAACTCATAG
AACTTTCTCCTGCTGTAGCTGTGGGAGCATTTTTGTTTGGTTTTGGTATAGTTTTTGCCGGAGGTTGCGAGTGTGGTTGG
ACTTATCGTGCCTTTGAAGGACAAAGTCATTTTATAATAGTAGGAATTGCAAATATAATAGGAACTATGATTTTAGCTTT
AAGTTATGACTTTTTACCAAAAGCTTTTAAAGAAGGTATAAAAATCAATCTTTTAACTGAATTTGGCAATTTAAATGGAT
TTTTTATCAACCTTATTTTATTCATCTTAATGTTTGTTTTTGTAGTATTTTACAAAAAACACTTTTTTAAAAATCAACTT
AAAGGATAA

Upstream 100 bases:

>100_bases
AAATTTATCAATATTCTTTTTGACTTCATATTAAATTTAAGCTATAATCTCACTCTTTTTTAGCATCAAGTTTTGATGAT
TACATTTTTAGGATCTTTCT

Downstream 100 bases:

>100_bases
ACAGTGAAAATTACTTATAGTTTAAATTTACAAGGTGAAGCTTGTCCTTATCCTGCTATAGCAACACTTGATGTCTTACC
TAAGCTTAAAAGTGGAGAAA

Product: inner membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 402; Mature: 402

Protein sequence:

>402_residues
MNSFKQKYLINFWDNSRSMIALGILSAVYFGIFGGVWAVTGEMTRWGGEFLELLGMNLDGYSYYQKQNLNGTPLTRTDGI
MLIGMFIGCLVAALLANKVKFRLPASNIRIFQAIVGGILSGYGARLAFGCNLANFFTGLPYFSLHTWLFTVFMVLGIYLG
VKICNTSFFKPKAKLERVNKENLPLNKQSLRTKLYFNLGILLFIAFLVWVFYLVFTNGNISTQNKQSLLALALIFGFVFG
FVISRGQICFTSCFRDLFLFGRDNAIKGALIGMIIASLIAFAFILQGHTSKLIELSPAVAVGAFLFGFGIVFAGGCECGW
TYRAFEGQSHFIIVGIANIIGTMILALSYDFLPKAFKEGIKINLLTEFGNLNGFFINLILFILMFVFVVFYKKHFFKNQL
KG

Sequences:

>Translated_402_residues
MNSFKQKYLINFWDNSRSMIALGILSAVYFGIFGGVWAVTGEMTRWGGEFLELLGMNLDGYSYYQKQNLNGTPLTRTDGI
MLIGMFIGCLVAALLANKVKFRLPASNIRIFQAIVGGILSGYGARLAFGCNLANFFTGLPYFSLHTWLFTVFMVLGIYLG
VKICNTSFFKPKAKLERVNKENLPLNKQSLRTKLYFNLGILLFIAFLVWVFYLVFTNGNISTQNKQSLLALALIFGFVFG
FVISRGQICFTSCFRDLFLFGRDNAIKGALIGMIIASLIAFAFILQGHTSKLIELSPAVAVGAFLFGFGIVFAGGCECGW
TYRAFEGQSHFIIVGIANIIGTMILALSYDFLPKAFKEGIKINLLTEFGNLNGFFINLILFILMFVFVVFYKKHFFKNQL
KG
>Mature_402_residues
MNSFKQKYLINFWDNSRSMIALGILSAVYFGIFGGVWAVTGEMTRWGGEFLELLGMNLDGYSYYQKQNLNGTPLTRTDGI
MLIGMFIGCLVAALLANKVKFRLPASNIRIFQAIVGGILSGYGARLAFGCNLANFFTGLPYFSLHTWLFTVFMVLGIYLG
VKICNTSFFKPKAKLERVNKENLPLNKQSLRTKLYFNLGILLFIAFLVWVFYLVFTNGNISTQNKQSLLALALIFGFVFG
FVISRGQICFTSCFRDLFLFGRDNAIKGALIGMIIASLIAFAFILQGHTSKLIELSPAVAVGAFLFGFGIVFAGGCECGW
TYRAFEGQSHFIIVGIANIIGTMILALSYDFLPKAFKEGIKINLLTEFGNLNGFFINLILFILMFVFVVFYKKHFFKNQL
KG

Specific function: Unknown

COG id: COG2391

COG function: function code R; Predicted transporter component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0394 family [H]

Homologues:

Organism=Escherichia coli, GI1788238, Length=398, Percent_Identity=44.2211055276382, Blast_Score=330, Evalue=7e-92,
Organism=Escherichia coli, GI1788323, Length=103, Percent_Identity=36.8932038834951, Blast_Score=64, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007272 [H]

Pfam domain/function: PF04143 DUF395 [H]

EC number: NA

Molecular weight: Translated: 44930; Mature: 44930

Theoretical pI: Translated: 10.10; Mature: 10.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSFKQKYLINFWDNSRSMIALGILSAVYFGIFGGVWAVTGEMTRWGGEFLELLGMNLDG
CCCHHHHHEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCC
YSYYQKQNLNGTPLTRTDGIMLIGMFIGCLVAALLANKVKFRLPASNIRIFQAIVGGILS
CHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHH
GYGARLAFGCNLANFFTGLPYFSLHTWLFTVFMVLGIYLGVKICNTSFFKPKAKLERVNK
CCCCHHEECCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCC
ENLPLNKQSLRTKLYFNLGILLFIAFLVWVFYLVFTNGNISTQNKQSLLALALIFGFVFG
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH
FVISRGQICFTSCFRDLFLFGRDNAIKGALIGMIIASLIAFAFILQGHTSKLIELSPAVA
HHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCHHHH
VGAFLFGFGIVFAGGCECGWTYRAFEGQSHFIIVGIANIIGTMILALSYDFLPKAFKEGI
HHHHHHHHHHHHCCCCCCCCEEEEECCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHCCC
KINLLTEFGNLNGFFINLILFILMFVFVVFYKKHFFKNQLKG
EEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNSFKQKYLINFWDNSRSMIALGILSAVYFGIFGGVWAVTGEMTRWGGEFLELLGMNLDG
CCCHHHHHEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCC
YSYYQKQNLNGTPLTRTDGIMLIGMFIGCLVAALLANKVKFRLPASNIRIFQAIVGGILS
CHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHH
GYGARLAFGCNLANFFTGLPYFSLHTWLFTVFMVLGIYLGVKICNTSFFKPKAKLERVNK
CCCCHHEECCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCC
ENLPLNKQSLRTKLYFNLGILLFIAFLVWVFYLVFTNGNISTQNKQSLLALALIFGFVFG
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH
FVISRGQICFTSCFRDLFLFGRDNAIKGALIGMIIASLIAFAFILQGHTSKLIELSPAVA
HHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCHHHH
VGAFLFGFGIVFAGGCECGWTYRAFEGQSHFIIVGIANIIGTMILALSYDFLPKAFKEGI
HHHHHHHHHHHHCCCCCCCCEEEEECCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHCCC
KINLLTEFGNLNGFFINLILFILMFVFVVFYKKHFFKNQLKG
EEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8371104; 9097040; 9278503 [H]