| Definition | Campylobacter jejuni RM1221, complete genome. |
|---|---|
| Accession | NC_003912 |
| Length | 1,777,831 |
Click here to switch to the map view.
The map label for this gene is 57238507
Identifier: 57238507
GI number: 57238507
Start: 1560096
End: 1560698
Strand: Reverse
Name: 57238507
Synonym: CJE1657
Alternate gene names: NA
Gene position: 1560698-1560096 (Counterclockwise)
Preceding gene: 57238508
Following gene: 57238506
Centisome position: 87.79
GC content: 28.86
Gene sequence:
>603_bases ATGAAAAAAATATTACAAGATGGCTTTTTTTTAGCTATCTTCTTCTTTGTTTTATTGCCTTCTAGGGTTTTTGCTCTTGA TGCTGTACTTTTTAATGAAAATATTTTAAGTCAAAAAGTAAGTAACGAGATTAATCTTATAGGAAAAGAGCTTTACCAAA AAAGTAATATTTTTATCGGCGTTATGGTTGGTGATAAAACTGAAATTGAAACTTTATTAAATAAACAAAAAGAACTTCCT CAATCTTATATATTGCTTCTTTTGTCAAAAAATTCTCACAAAGTTGATATAGTGGGCTCAAAAGGTGCTTTAGCTTTGAT TGATAAAGAAGCTGTGCTTAGTCCTTATCCTGGAACAGGATCTATTTTGCCGATATTAGCTACAAATAAAGGTGATATTT ATAATGCTGCTATACTTAATGGTTATGCAGATATTGTAGATCGTGTGGCAAAATCCTTGGGATTACAATTAGAACATTCT ATAGGTAATGCAAATCGTGATACTATCAATATTTTAAGAATACTTATCTATGGATTTATTTGCTTTGCATTGTTATACTA TGCACAAAGAAGAATAAAGAGGAAAAAAAATGTTAGAAACTAA
Upstream 100 bases:
>100_bases CAATGAGTAAGGCTTTGGAATATTTAATTGTTATTGGTTTAGTTGTTGTTGCTGCAATCACCGCTTGGTCGGTTTTGACC GTAAATCATCTTCATATAGG
Downstream 100 bases:
>100_bases AAAAAGTTTTTGGCCTTATGGTATTTTGCTTTCACTTTTGGCTATAATTATTGCTTGTATTGTAACGATTTTTATAGCAA GTCACCATCCTGTGTATGAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 200; Mature: 200
Protein sequence:
>200_residues MKKILQDGFFLAIFFFVLLPSRVFALDAVLFNENILSQKVSNEINLIGKELYQKSNIFIGVMVGDKTEIETLLNKQKELP QSYILLLLSKNSHKVDIVGSKGALALIDKEAVLSPYPGTGSILPILATNKGDIYNAAILNGYADIVDRVAKSLGLQLEHS IGNANRDTINILRILIYGFICFALLYYAQRRIKRKKNVRN
Sequences:
>Translated_200_residues MKKILQDGFFLAIFFFVLLPSRVFALDAVLFNENILSQKVSNEINLIGKELYQKSNIFIGVMVGDKTEIETLLNKQKELP QSYILLLLSKNSHKVDIVGSKGALALIDKEAVLSPYPGTGSILPILATNKGDIYNAAILNGYADIVDRVAKSLGLQLEHS IGNANRDTINILRILIYGFICFALLYYAQRRIKRKKNVRN >Mature_200_residues MKKILQDGFFLAIFFFVLLPSRVFALDAVLFNENILSQKVSNEINLIGKELYQKSNIFIGVMVGDKTEIETLLNKQKELP QSYILLLLSKNSHKVDIVGSKGALALIDKEAVLSPYPGTGSILPILATNKGDIYNAAILNGYADIVDRVAKSLGLQLEHS IGNANRDTINILRILIYGFICFALLYYAQRRIKRKKNVRN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22388; Mature: 22388
Theoretical pI: Translated: 10.02; Mature: 10.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKILQDGFFLAIFFFVLLPSRVFALDAVLFNENILSQKVSNEINLIGKELYQKSNIFIG CCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEE VMVGDKTEIETLLNKQKELPQSYILLLLSKNSHKVDIVGSKGALALIDKEAVLSPYPGTG EEECCHHHHHHHHHHHHHCCHHHEEEEECCCCCEEEEEECCCCEEEEECHHHCCCCCCCC SILPILATNKGDIYNAAILNGYADIVDRVAKSLGLQLEHSIGNANRDTINILRILIYGFI CEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCHHHHHHHHHHHHHH CFALLYYAQRRIKRKKNVRN HHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MKKILQDGFFLAIFFFVLLPSRVFALDAVLFNENILSQKVSNEINLIGKELYQKSNIFIG CCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEE VMVGDKTEIETLLNKQKELPQSYILLLLSKNSHKVDIVGSKGALALIDKEAVLSPYPGTG EEECCHHHHHHHHHHHHHCCHHHEEEEECCCCCEEEEEECCCCEEEEECHHHCCCCCCCC SILPILATNKGDIYNAAILNGYADIVDRVAKSLGLQLEHSIGNANRDTINILRILIYGFI CEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCHHHHHHHHHHHHHH CFALLYYAQRRIKRKKNVRN HHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA