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The map label for this gene is kpsM [H]

Identifier: 57238471

GI number: 57238471

Start: 1525495

End: 1526277

Strand: Reverse

Name: kpsM [H]

Synonym: CJE1621

Alternate gene names: 57238471

Gene position: 1526277-1525495 (Counterclockwise)

Preceding gene: 57238472

Following gene: 57238470

Centisome position: 85.85

GC content: 28.86

Gene sequence:

>783_bases
ATGTTAAATGTAATTCACGCTTTATTTTTTAGGGAGTTAAAAACTAGATTTGGAAAAAATAGGTATCTTGGATATATATG
GGTAGTTGGAGAGCCTATGAGCGTTGTGCTTTTGGTGACTATTATAGGAACTGTCATTAGGGAATATCATCATCAAGTTA
TGCCTGAAGGAATTTCTATTTTTATGTTTTTAATTTCAGGTATTATGCCTTTTTTTATGTTTAGAAGTATAGTTACTCAA
CTTATGAATGGAATAGGGGCAAATTTATCTTTGTTTGCCTATAAACCTGTAAAACCTATACATGTATTTATTGCTAGAAC
TTTGCTTGAATTTTGTATTTATTTTGTGATTTTTATCACCGTGCTTTTTTTTGCAGGGTGGTTCTTTAGACTCGATGTAT
TTCCTGTTCATTTACTTGGAGTTTTATTTTGTATTTTTTTACTCATATGCTCAGCTTTTGCTTTAGGGATTTGTTTTGCT
ATTGTTTGGCACTTTGTAGAATCTTTAAGAACTTTATTAGCTTATTTTAGTATAGTATTTTATTGGAGTTCTGGGATTAT
ATTTCCTACCTGGTTAACTCCTCGTCCTTTACTTGATATATTTTATTACAATCCTTTGCTTCATATTTTTGAACTTTTAA
GATTTAATTTTTTTGAGAATTATCCTTTGCAAGATGAATATAGTTATTTTTATGCTATATTTTGGATTTTACTAGTTTTA
TTTATAGGGCTTTTTATTTACTACTATAATAGACAAGCTCTAACGGCGGCAAAAAAAGAATGA

Upstream 100 bases:

>100_bases
GTAAAAAGCTTGAATTTTGTAAAAAATAAATTTTTATGATTTTATTTAAAAAAATGAGTTATGATTATAGTTTATGTAAA
TTGTTAGGTATAGAAAATAA

Downstream 100 bases:

>100_bases
TAAAGCTAATTAATCTAACTAAATCTTATCCTTTATTTAGTGGCGGAAGGCATTATGTTTTTAAAAATTTTACTTTTGAA
TTTCCTGAAAATTGTAGTAT

Product: capsular polysaccharide ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 260; Mature: 260

Protein sequence:

>260_residues
MLNVIHALFFRELKTRFGKNRYLGYIWVVGEPMSVVLLVTIIGTVIREYHHQVMPEGISIFMFLISGIMPFFMFRSIVTQ
LMNGIGANLSLFAYKPVKPIHVFIARTLLEFCIYFVIFITVLFFAGWFFRLDVFPVHLLGVLFCIFLLICSAFALGICFA
IVWHFVESLRTLLAYFSIVFYWSSGIIFPTWLTPRPLLDIFYYNPLLHIFELLRFNFFENYPLQDEYSYFYAIFWILLVL
FIGLFIYYYNRQALTAAKKE

Sequences:

>Translated_260_residues
MLNVIHALFFRELKTRFGKNRYLGYIWVVGEPMSVVLLVTIIGTVIREYHHQVMPEGISIFMFLISGIMPFFMFRSIVTQ
LMNGIGANLSLFAYKPVKPIHVFIARTLLEFCIYFVIFITVLFFAGWFFRLDVFPVHLLGVLFCIFLLICSAFALGICFA
IVWHFVESLRTLLAYFSIVFYWSSGIIFPTWLTPRPLLDIFYYNPLLHIFELLRFNFFENYPLQDEYSYFYAIFWILLVL
FIGLFIYYYNRQALTAAKKE
>Mature_260_residues
MLNVIHALFFRELKTRFGKNRYLGYIWVVGEPMSVVLLVTIIGTVIREYHHQVMPEGISIFMFLISGIMPFFMFRSIVTQ
LMNGIGANLSLFAYKPVKPIHVFIARTLLEFCIYFVIFITVLFFAGWFFRLDVFPVHLLGVLFCIFLLICSAFALGICFA
IVWHFVESLRTLLAYFSIVFYWSSGIIFPTWLTPRPLLDIFYYNPLLHIFELLRFNFFENYPLQDEYSYFYAIFWILLVL
FIGLFIYYYNRQALTAAKKE

Specific function: KpsM and kpsT constitute a system for the transport of polysialic acid across the cytoplasmic membrane [H]

COG id: COG1682

COG function: function code GM; ABC-type polysaccharide/polyol phosphate export systems, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-2 domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000412
- InterPro:   IPR013526
- InterPro:   IPR013525 [H]

Pfam domain/function: PF01061 ABC2_membrane [H]

EC number: NA

Molecular weight: Translated: 30778; Mature: 30778

Theoretical pI: Translated: 8.79; Mature: 8.79

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNVIHALFFRELKTRFGKNRYLGYIWVVGEPMSVVLLVTIIGTVIREYHHQVMPEGISI
CHHHHHHHHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
FMFLISGIMPFFMFRSIVTQLMNGIGANLSLFAYKPVKPIHVFIARTLLEFCIYFVIFIT
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHH
VLFFAGWFFRLDVFPVHLLGVLFCIFLLICSAFALGICFAIVWHFVESLRTLLAYFSIVF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YWSSGIIFPTWLTPRPLLDIFYYNPLLHIFELLRFNFFENYPLQDEYSYFYAIFWILLVL
HHHCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
FIGLFIYYYNRQALTAAKKE
HHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLNVIHALFFRELKTRFGKNRYLGYIWVVGEPMSVVLLVTIIGTVIREYHHQVMPEGISI
CHHHHHHHHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
FMFLISGIMPFFMFRSIVTQLMNGIGANLSLFAYKPVKPIHVFIARTLLEFCIYFVIFIT
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHH
VLFFAGWFFRLDVFPVHLLGVLFCIFLLICSAFALGICFAIVWHFVESLRTLLAYFSIVF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YWSSGIIFPTWLTPRPLLDIFYYNPLLHIFELLRFNFFENYPLQDEYSYFYAIFWILLVL
HHHCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
FIGLFIYYYNRQALTAAKKE
HHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1856162; 7715449 [H]