| Definition | Campylobacter jejuni RM1221, complete genome. |
|---|---|
| Accession | NC_003912 |
| Length | 1,777,831 |
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The map label for this gene is 57238453
Identifier: 57238453
GI number: 57238453
Start: 1504703
End: 1506655
Strand: Reverse
Name: 57238453
Synonym: CJE1603
Alternate gene names: NA
Gene position: 1506655-1504703 (Counterclockwise)
Preceding gene: 57238454
Following gene: 57238452
Centisome position: 84.75
GC content: 25.65
Gene sequence:
>1953_bases ATGCAGACAATTAAATCTAAGTTGCAATTATCTTTGCAGAATTGGGATTTTAATACTTTGGAAAATTATTATGAGCTATT AGTAAAGAATAATAAAAATCATATGGATTATATTGTTTATTTGTATGAAACTGGACAAATTAAAAAAATAAAAAAAATAC TTAATTCTTGTCAAAATGAGCCAAATTGGTGGGTGAGTGATAAAATTAATATCTCTTATGAAAATCTTGTGAGTATAATA AATAGCAAAGAGATGGTTAATTTGTCTGATGTTTCTATTGGTTGTTTTGCATGTTTACAATTAAATAGTTCTATATATAA CGGGATTGTAGATATTGAATTATTATGTAAAAATTTTCTTTATGAATATAGCAATAAAATGAGTAGACTATCGAAAAAAT ATTATATTTCGAAAATTATAGATTTGGCTTTATCGGGAGAAAAAATAAGCAAAAATGAAATTTTTAATAATGAAAATCAA ATAAAAGATTATTTATTCTTTGCAAATTTATCAACTGTATTACTAAATGATTTTAATCAAGATTATGGTAGTAGGATTTA TTATAAAAAATGTAATTATATTTTAAAATCTTTTTTATTTAGAAATAAAAAAATACATACACCTAATAGGATTGCTCTTT GTATTTCTGGAGCAGCTAGGGGTAATTGGTTGGAGGGTTTAAAAGACGTCATAAAAACCTTCTCTCAATCATTTAAAGTT GATTGTTTTTTATTTACATGGAAAGAGGCAATAGAATGGCCTGCATTGTGTGGAGGTGGATACTGGGTTAAAAGATTATT AGATCCAGCTTTTGATAAAATAGCAGATGAGGAAATTAAAAAAGATATTTTATTTAAAAAATTTTTTCCAAATGTTTATT CTATTTTAAATAAGGAGTTTTATTCGCAAGATGAAGTTTCGGCTATACAGTTAGATGGTATAAGTGAAATTAAATCTTAT GTTATAGAGAGACAAAAAGATTTTGAAGATAGATACGGGAAAGTTGTAAACAATTCTAAATTAAATTATGGTATTTTTAG AGCTTTTGAATTAATGGAAGAATATGAAAAGCAAAATAATTTTAAGTATGATTTTGTTATTAGGCTTAGACCCGATGCTA AATATATTACAAATTTAGATTTAAAAAGATTAAATGAGGTAAACAATGGCGAGTTAGCTTTAAAAATTTTTCCTTATCAA AGTGGCACTCCAAAAGATTTTGCCGTATATGGCAGAAGAAATACAATGGAAGTTTACTCTAAAATATGGTATTATGCCTT TTTTAACAAAGATTTTGATTTTTTTGAACAAATTCCTAAAGTACTACATAATCATCATGTTGCAAGAAATTGGATTTTGC TTAATAATTTTGAAATTGTTCAGACCTATATAGAGGAAAAGTTAACGGGAGAGTCTTTAGTCTCTAATGGCTACATTATG CCTAATATATCAAGAGAAATATATTTGGATTTACTAAAACTTCAAGGTAAAGTTGATAACAAGAAGCTTAATAGATTTGA ATATTTTTTTCAAGAGATTATGAAAAAGTATGGAAAAATTGAAAATAATGTTTATTTGAGTGCTTTGCAAAGGGTTAGAA ATCATCTTTGTTATAAATTTGGAGTTGCATTAATAGAAAATTCAAAAAGCATATTAGGATATATAAGAATGCCTTATGTA TTATCTCATATAAAAGATAAACATAAACAAGAACAAAAAGCCTATGAAGAAAAAATAAAAGAAAATCCAAATTTAGCTTT GCCTCCTTTAGAAACATATCCAGATTATAATGAAGCTTTAAAAGAAAAAGAATGTTTTACTTATAAACTAGGACAAGAAT TTATAAAAGCAAGTCAGAATTGGTATGGGGGGGGGTATATCAAGTTGCTATTTGAAATTAGGAGGTTAAAGAAGGAATAT TATGATAAAGGAAAAGGAAAAGGAAATCTTTAG
Upstream 100 bases:
>100_bases AAAAACATAAGATAGGTTATATGATTGTTGATAATTATTTTTCTTATGGAACTCCCGAGGAGTATTTGGAAAATCAATAT TGGTTTAAGGTTAAATCGTG
Downstream 100 bases:
>100_bases TATAATTGAAAGAAATTTGCAATTATGGAATTTTGATTTAGTTGAAAGTATTTATTATACGAATTACAAGCTATCTGTAA ATATAGAAACAAAATTTTAT
Product: capsular polysaccharide biosynthesis protein
Products: NA
Alternate protein names: Capsular Polysaccharide Biosynthesis Protein; Alpha-2 3-Sialyltransferase; Capsular Polysaccharide Heptosyltransferase; Sugar Transferase); Galactosyltransferase; Glycosyl Transferase Family 8 Family; Glycosyl Transferase Family Protein; Glycosyltransferase; Glycosyl Transferase
Number of amino acids: Translated: 650; Mature: 650
Protein sequence:
>650_residues MQTIKSKLQLSLQNWDFNTLENYYELLVKNNKNHMDYIVYLYETGQIKKIKKILNSCQNEPNWWVSDKINISYENLVSII NSKEMVNLSDVSIGCFACLQLNSSIYNGIVDIELLCKNFLYEYSNKMSRLSKKYYISKIIDLALSGEKISKNEIFNNENQ IKDYLFFANLSTVLLNDFNQDYGSRIYYKKCNYILKSFLFRNKKIHTPNRIALCISGAARGNWLEGLKDVIKTFSQSFKV DCFLFTWKEAIEWPALCGGGYWVKRLLDPAFDKIADEEIKKDILFKKFFPNVYSILNKEFYSQDEVSAIQLDGISEIKSY VIERQKDFEDRYGKVVNNSKLNYGIFRAFELMEEYEKQNNFKYDFVIRLRPDAKYITNLDLKRLNEVNNGELALKIFPYQ SGTPKDFAVYGRRNTMEVYSKIWYYAFFNKDFDFFEQIPKVLHNHHVARNWILLNNFEIVQTYIEEKLTGESLVSNGYIM PNISREIYLDLLKLQGKVDNKKLNRFEYFFQEIMKKYGKIENNVYLSALQRVRNHLCYKFGVALIENSKSILGYIRMPYV LSHIKDKHKQEQKAYEEKIKENPNLALPPLETYPDYNEALKEKECFTYKLGQEFIKASQNWYGGGYIKLLFEIRRLKKEY YDKGKGKGNL
Sequences:
>Translated_650_residues MQTIKSKLQLSLQNWDFNTLENYYELLVKNNKNHMDYIVYLYETGQIKKIKKILNSCQNEPNWWVSDKINISYENLVSII NSKEMVNLSDVSIGCFACLQLNSSIYNGIVDIELLCKNFLYEYSNKMSRLSKKYYISKIIDLALSGEKISKNEIFNNENQ IKDYLFFANLSTVLLNDFNQDYGSRIYYKKCNYILKSFLFRNKKIHTPNRIALCISGAARGNWLEGLKDVIKTFSQSFKV DCFLFTWKEAIEWPALCGGGYWVKRLLDPAFDKIADEEIKKDILFKKFFPNVYSILNKEFYSQDEVSAIQLDGISEIKSY VIERQKDFEDRYGKVVNNSKLNYGIFRAFELMEEYEKQNNFKYDFVIRLRPDAKYITNLDLKRLNEVNNGELALKIFPYQ SGTPKDFAVYGRRNTMEVYSKIWYYAFFNKDFDFFEQIPKVLHNHHVARNWILLNNFEIVQTYIEEKLTGESLVSNGYIM PNISREIYLDLLKLQGKVDNKKLNRFEYFFQEIMKKYGKIENNVYLSALQRVRNHLCYKFGVALIENSKSILGYIRMPYV LSHIKDKHKQEQKAYEEKIKENPNLALPPLETYPDYNEALKEKECFTYKLGQEFIKASQNWYGGGYIKLLFEIRRLKKEY YDKGKGKGNL >Mature_650_residues MQTIKSKLQLSLQNWDFNTLENYYELLVKNNKNHMDYIVYLYETGQIKKIKKILNSCQNEPNWWVSDKINISYENLVSII NSKEMVNLSDVSIGCFACLQLNSSIYNGIVDIELLCKNFLYEYSNKMSRLSKKYYISKIIDLALSGEKISKNEIFNNENQ IKDYLFFANLSTVLLNDFNQDYGSRIYYKKCNYILKSFLFRNKKIHTPNRIALCISGAARGNWLEGLKDVIKTFSQSFKV DCFLFTWKEAIEWPALCGGGYWVKRLLDPAFDKIADEEIKKDILFKKFFPNVYSILNKEFYSQDEVSAIQLDGISEIKSY VIERQKDFEDRYGKVVNNSKLNYGIFRAFELMEEYEKQNNFKYDFVIRLRPDAKYITNLDLKRLNEVNNGELALKIFPYQ SGTPKDFAVYGRRNTMEVYSKIWYYAFFNKDFDFFEQIPKVLHNHHVARNWILLNNFEIVQTYIEEKLTGESLVSNGYIM PNISREIYLDLLKLQGKVDNKKLNRFEYFFQEIMKKYGKIENNVYLSALQRVRNHLCYKFGVALIENSKSILGYIRMPYV LSHIKDKHKQEQKAYEEKIKENPNLALPPLETYPDYNEALKEKECFTYKLGQEFIKASQNWYGGGYIKLLFEIRRLKKEY YDKGKGKGNL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 76997; Mature: 76997
Theoretical pI: Translated: 9.19; Mature: 9.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQTIKSKLQLSLQNWDFNTLENYYELLVKNNKNHMDYIVYLYETGQIKKIKKILNSCQNE CCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEEEEEEEEECCCHHHHHHHHHHHCCC PNWWVSDKINISYENLVSIINSKEMVNLSDVSIGCFACLQLNSSIYNGIVDIELLCKNFL CCEEECCEEECCHHHHHHHHCCCCEEEECCCHHHHHHHHHHCHHHHCCHHHHHHHHHHHH YEYSNKMSRLSKKYYISKIIDLALSGEKISKNEIFNNENQIKDYLFFANLSTVLLNDFNQ HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHCCH DYGSRIYYKKCNYILKSFLFRNKKIHTPNRIALCISGAARGNWLEGLKDVIKTFSQSFKV HHCCEEHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCE DCFLFTWKEAIEWPALCGGGYWVKRLLDPAFDKIADEEIKKDILFKKFFPNVYSILNKEF EEEEEEHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YSQDEVSAIQLDGISEIKSYVIERQKDFEDRYGKVVNNSKLNYGIFRAFELMEEYEKQNN CCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCC FKYDFVIRLRPDAKYITNLDLKRLNEVNNGELALKIFPYQSGTPKDFAVYGRRNTMEVYS CEEEEEEEECCCCHHHHCCCHHHHCCCCCCEEEEEEEECCCCCCCCEEEECCCCHHHHHH KIWYYAFFNKDFDFFEQIPKVLHNHHVARNWILLNNFEIVQTYIEEKLTGESLVSNGYIM HHHHHEEECCCHHHHHHHHHHHHCCHHHCCEEEECCHHHHHHHHHHHHCHHHHHHCCEEC PNISREIYLDLLKLQGKVDNKKLNRFEYFFQEIMKKYGKIENNVYLSALQRVRNHLCYKF CCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH GVALIENSKSILGYIRMPYVLSHIKDKHKQEQKAYEEKIKENPNLALPPLETYPDYNEAL HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHH KEKECFTYKLGQEFIKASQNWYGGGYIKLLFEIRRLKKEYYDKGKGKGNL HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MQTIKSKLQLSLQNWDFNTLENYYELLVKNNKNHMDYIVYLYETGQIKKIKKILNSCQNE CCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEEEEEEEEECCCHHHHHHHHHHHCCC PNWWVSDKINISYENLVSIINSKEMVNLSDVSIGCFACLQLNSSIYNGIVDIELLCKNFL CCEEECCEEECCHHHHHHHHCCCCEEEECCCHHHHHHHHHHCHHHHCCHHHHHHHHHHHH YEYSNKMSRLSKKYYISKIIDLALSGEKISKNEIFNNENQIKDYLFFANLSTVLLNDFNQ HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHCCH DYGSRIYYKKCNYILKSFLFRNKKIHTPNRIALCISGAARGNWLEGLKDVIKTFSQSFKV HHCCEEHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCE DCFLFTWKEAIEWPALCGGGYWVKRLLDPAFDKIADEEIKKDILFKKFFPNVYSILNKEF EEEEEEHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YSQDEVSAIQLDGISEIKSYVIERQKDFEDRYGKVVNNSKLNYGIFRAFELMEEYEKQNN CCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCC FKYDFVIRLRPDAKYITNLDLKRLNEVNNGELALKIFPYQSGTPKDFAVYGRRNTMEVYS CEEEEEEEECCCCHHHHCCCHHHHCCCCCCEEEEEEEECCCCCCCCEEEECCCCHHHHHH KIWYYAFFNKDFDFFEQIPKVLHNHHVARNWILLNNFEIVQTYIEEKLTGESLVSNGYIM HHHHHEEECCCHHHHHHHHHHHHCCHHHCCEEEECCHHHHHHHHHHHHCHHHHHHCCEEC PNISREIYLDLLKLQGKVDNKKLNRFEYFFQEIMKKYGKIENNVYLSALQRVRNHLCYKF CCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH GVALIENSKSILGYIRMPYVLSHIKDKHKQEQKAYEEKIKENPNLALPPLETYPDYNEAL HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHH KEKECFTYKLGQEFIKASQNWYGGGYIKLLFEIRRLKKEYYDKGKGKGNL HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA