| Definition | Campylobacter jejuni RM1221, complete genome. |
|---|---|
| Accession | NC_003912 |
| Length | 1,777,831 |
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The map label for this gene is 57238348
Identifier: 57238348
GI number: 57238348
Start: 1386094
End: 1387002
Strand: Direct
Name: 57238348
Synonym: CJE1490
Alternate gene names: NA
Gene position: 1386094-1387002 (Clockwise)
Preceding gene: 57238347
Following gene: 57238349
Centisome position: 77.97
GC content: 26.73
Gene sequence:
>909_bases ATGTTAAAAAATACTAAAAAACTATTTAAACTCATAGAAGAAAAAAATGCTTTGCATAAAAAATGTTTAGATGGATTGCA ACTTTCAGATGAAGAATATAATGATTTAGAAAAACTTATCATCTATTATAAAGATACATTAAACATCAATCTAGAAGAAC AAGCTAAAAGTTATATAGTTGTACTCAATGACACTCTAGAAGAAACTAAATATTTTATAGAATTTGGAAAATATAGATAT AGCACTTTAGCAGAAGTAAAAAATATGGTATATTTCAATGAAAATTATATGAAGCAATACATGGTGGGACTTGCTATATC TTCTTTTATTTGGAATGCTCATATTGAAGTTAGAAGATATTTTGCTAAATATATAGATAAAAAACAAGATCGAAAAAGCA CTTATCTTGAAATCGGTCCTGGTCATGGAGAATTTTTTGTTAAAGCACTAAGAAGTCAAAAATTTATAGAATATTATGGA ATAGATATTTCTCCTATAAGTTGTCAAATGAGCAAAGATATGGTAGAAAATCAATTTGGAGCAATTAATCAAAATAATTT TAAATGTGATTTTATATGTAAAGATTTCACTAAATGCAATTTCAACAATAAAGCAGATTTAGTTGTAATGGGAGAAGTCT TGGAGCACGTAGAACAACCTTTACAGTTTATGAAAGATGTAAAAACTTTACTGAATGATGGTGGAGAAATTTTTGCAACC ATCCCTATCAACGCTCCTGCTATTGACCATATTTATTTATTTTCCCATCCTGATGAAGTTAAAGATTTGCTTAAAAATGC AGGTTTAAAAATCAAAGAATGCGAATATTTTATGGCAAATAATTATTCTTTAGAAAAAGCATTAAAAACAAAAAATGCCA TTGTTATGGCAGTGGTTTTGGAAAAATAA
Upstream 100 bases:
>100_bases TCATGAGTTTAGAAGAAGAATTTGAAATCAAATTTAGCAAAGATGAATTAAGTCAGCTAAAATCTCAAAATGAACTTTTA AAAGCTATTAAGGAGAAATT
Downstream 100 bases:
>100_bases TGAATCTTTTTTCACCTCATTTAAAACGCAATGGGCTTATAAAATTTGCCAAAGAGTTAGACTTTAGTAAAAGTCAAGAT CTTCTTGTTAATATCCATAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 302; Mature: 302
Protein sequence:
>302_residues MLKNTKKLFKLIEEKNALHKKCLDGLQLSDEEYNDLEKLIIYYKDTLNINLEEQAKSYIVVLNDTLEETKYFIEFGKYRY STLAEVKNMVYFNENYMKQYMVGLAISSFIWNAHIEVRRYFAKYIDKKQDRKSTYLEIGPGHGEFFVKALRSQKFIEYYG IDISPISCQMSKDMVENQFGAINQNNFKCDFICKDFTKCNFNNKADLVVMGEVLEHVEQPLQFMKDVKTLLNDGGEIFAT IPINAPAIDHIYLFSHPDEVKDLLKNAGLKIKECEYFMANNYSLEKALKTKNAIVMAVVLEK
Sequences:
>Translated_302_residues MLKNTKKLFKLIEEKNALHKKCLDGLQLSDEEYNDLEKLIIYYKDTLNINLEEQAKSYIVVLNDTLEETKYFIEFGKYRY STLAEVKNMVYFNENYMKQYMVGLAISSFIWNAHIEVRRYFAKYIDKKQDRKSTYLEIGPGHGEFFVKALRSQKFIEYYG IDISPISCQMSKDMVENQFGAINQNNFKCDFICKDFTKCNFNNKADLVVMGEVLEHVEQPLQFMKDVKTLLNDGGEIFAT IPINAPAIDHIYLFSHPDEVKDLLKNAGLKIKECEYFMANNYSLEKALKTKNAIVMAVVLEK >Mature_302_residues MLKNTKKLFKLIEEKNALHKKCLDGLQLSDEEYNDLEKLIIYYKDTLNINLEEQAKSYIVVLNDTLEETKYFIEFGKYRY STLAEVKNMVYFNENYMKQYMVGLAISSFIWNAHIEVRRYFAKYIDKKQDRKSTYLEIGPGHGEFFVKALRSQKFIEYYG IDISPISCQMSKDMVENQFGAINQNNFKCDFICKDFTKCNFNNKADLVVMGEVLEHVEQPLQFMKDVKTLLNDGGEIFAT IPINAPAIDHIYLFSHPDEVKDLLKNAGLKIKECEYFMANNYSLEKALKTKNAIVMAVVLEK
Specific function: Unknown
COG id: COG0500
COG function: function code QR; SAM-dependent methyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35245; Mature: 35245
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKNTKKLFKLIEEKNALHKKCLDGLQLSDEEYNDLEKLIIYYKDTLNINLEEQAKSYIV CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHEEEEEECCEEEEEHHCCCEEEE VLNDTLEETKYFIEFGKYRYSTLAEVKNMVYFNENYMKQYMVGLAISSFIWNAHIEVRRY EEECCHHHHHHHHHHHHHHHHHHHHHHHHEEECHHHHHHHHHHHHHHHHHHHHHHHHHHH FAKYIDKKQDRKSTYLEIGPGHGEFFVKALRSQKFIEYYGIDISPISCQMSKDMVENQFG HHHHHCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCC AINQNNFKCDFICKDFTKCNFNNKADLVVMGEVLEHVEQPLQFMKDVKTLLNDGGEIFAT CCCCCCCEEEEEECCHHHCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEE IPINAPAIDHIYLFSHPDEVKDLLKNAGLKIKECEYFMANNYSLEKALKTKNAIVMAVVL EECCCCCCCEEEEECCCHHHHHHHHHCCCEEEECHHHHCCCCHHHHHHHCCCEEEEEEEE EK CC >Mature Secondary Structure MLKNTKKLFKLIEEKNALHKKCLDGLQLSDEEYNDLEKLIIYYKDTLNINLEEQAKSYIV CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHEEEEEECCEEEEEHHCCCEEEE VLNDTLEETKYFIEFGKYRYSTLAEVKNMVYFNENYMKQYMVGLAISSFIWNAHIEVRRY EEECCHHHHHHHHHHHHHHHHHHHHHHHHEEECHHHHHHHHHHHHHHHHHHHHHHHHHHH FAKYIDKKQDRKSTYLEIGPGHGEFFVKALRSQKFIEYYGIDISPISCQMSKDMVENQFG HHHHHCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCC AINQNNFKCDFICKDFTKCNFNNKADLVVMGEVLEHVEQPLQFMKDVKTLLNDGGEIFAT CCCCCCCEEEEEECCHHHCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEE IPINAPAIDHIYLFSHPDEVKDLLKNAGLKIKECEYFMANNYSLEKALKTKNAIVMAVVL EECCCCCCCEEEEECCCHHHHHHHHHCCCEEEECHHHHCCCCHHHHHHHCCCEEEEEEEE EK CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA