| Definition | Campylobacter jejuni RM1221, complete genome. |
|---|---|
| Accession | NC_003912 |
| Length | 1,777,831 |
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The map label for this gene is 57238335
Identifier: 57238335
GI number: 57238335
Start: 1374262
End: 1374933
Strand: Reverse
Name: 57238335
Synonym: CJE1477
Alternate gene names: NA
Gene position: 1374933-1374262 (Counterclockwise)
Preceding gene: 57238336
Following gene: 57238332
Centisome position: 77.34
GC content: 26.79
Gene sequence:
>672_bases ATGATTTTTGGAAAAATTGATTATATTAATCTTTTACCTTTACATATATATCTTAAGAAATATCCCCTACCTAATGGTTA TAAAGCAAGTATGGAGTATAAAAAAGGAGTTCCAAGTAAGCTAAATAAAGATTTATTTTATAGAAGAATTGATGCAGCTA TCATTTCAAGCATAGAAAGTGCTAGAAAAAAATATAAAAATTTAGATTTGGGTATTTGTGCTAATAAAAGAGTTTTAAGT GTATTAGTAGAAAAAAATACATCAAATGCCAAAGATCCAAGTTCAGCAACTTCAAACGCTCTGGCTAAAGTATTAAAACA AGATGGAAAAGTAATTATAGGTGATAAGGCTTTAAAGCTTTATCTAAAAGATCCTTCTAAATATATCGATTTATGTGCAA AATGGCACGAAAAAACAGGATTGCCTTTTGTTTTTGCTAGATTTTCTTGTGTGCAAAAAAAAGCTTTATATAAACAAATT TTGAAAAAATTTCCAAAAACAAAGATTAAAATTCCCTATTATATACTTCAAAAATATGCCAAAACAAGGGATTTAGATGT AAAAGATGTTAGATATTATTTAGATGAAGTTATATATCATAAAATTTCTACCAAAGAAAAAACAGCCTTAAAGCGTTTTG TAAAGGCTTGCAAGGCTTTAAATCTTGCTTAG
Upstream 100 bases:
>100_bases TTTTTGTGGCTTGTATTGATGAAGGTTTAAATGAAAAAGGTTATATTATCCCAGGGCTTGGAGATGCAGGAGATAGAGTG TTTAACACTCTTTAAAAGAG
Downstream 100 bases:
>100_bases TGTTCAAATTCTCTAAGTTCCTTAACTGTTCCAAGGAGAATTACAACATCTCCACTATAAACTGTCGTGGTTTCTAAATC AGGTAGTATTTCCCAGTCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 223; Mature: 223
Protein sequence:
>223_residues MIFGKIDYINLLPLHIYLKKYPLPNGYKASMEYKKGVPSKLNKDLFYRRIDAAIISSIESARKKYKNLDLGICANKRVLS VLVEKNTSNAKDPSSATSNALAKVLKQDGKVIIGDKALKLYLKDPSKYIDLCAKWHEKTGLPFVFARFSCVQKKALYKQI LKKFPKTKIKIPYYILQKYAKTRDLDVKDVRYYLDEVIYHKISTKEKTALKRFVKACKALNLA
Sequences:
>Translated_223_residues MIFGKIDYINLLPLHIYLKKYPLPNGYKASMEYKKGVPSKLNKDLFYRRIDAAIISSIESARKKYKNLDLGICANKRVLS VLVEKNTSNAKDPSSATSNALAKVLKQDGKVIIGDKALKLYLKDPSKYIDLCAKWHEKTGLPFVFARFSCVQKKALYKQI LKKFPKTKIKIPYYILQKYAKTRDLDVKDVRYYLDEVIYHKISTKEKTALKRFVKACKALNLA >Mature_223_residues MIFGKIDYINLLPLHIYLKKYPLPNGYKASMEYKKGVPSKLNKDLFYRRIDAAIISSIESARKKYKNLDLGICANKRVLS VLVEKNTSNAKDPSSATSNALAKVLKQDGKVIIGDKALKLYLKDPSKYIDLCAKWHEKTGLPFVFARFSCVQKKALYKQI LKKFPKTKIKIPYYILQKYAKTRDLDVKDVRYYLDEVIYHKISTKEKTALKRFVKACKALNLA
Specific function: Unknown
COG id: COG1427
COG function: function code R; Predicted periplasmic solute-binding protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25680; Mature: 25680
Theoretical pI: Translated: 10.47; Mature: 10.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIFGKIDYINLLPLHIYLKKYPLPNGYKASMEYKKGVPSKLNKDLFYRRIDAAIISSIES CCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHH ARKKYKNLDLGICANKRVLSVLVEKNTSNAKDPSSATSNALAKVLKQDGKVIIGDKALKL HHHHHCCCCCEECCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCEEECCCEEEE YLKDPSKYIDLCAKWHEKTGLPFVFARFSCVQKKALYKQILKKFPKTKIKIPYYILQKYA EECCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEECCHHHHHHHHH KTRDLDVKDVRYYLDEVIYHKISTKEKTALKRFVKACKALNLA HHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MIFGKIDYINLLPLHIYLKKYPLPNGYKASMEYKKGVPSKLNKDLFYRRIDAAIISSIES CCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHH ARKKYKNLDLGICANKRVLSVLVEKNTSNAKDPSSATSNALAKVLKQDGKVIIGDKALKL HHHHHCCCCCEECCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCEEECCCEEEE YLKDPSKYIDLCAKWHEKTGLPFVFARFSCVQKKALYKQILKKFPKTKIKIPYYILQKYA EECCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEECCHHHHHHHHH KTRDLDVKDVRYYLDEVIYHKISTKEKTALKRFVKACKALNLA HHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA