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The map label for this gene is selU [H]

Identifier: 57238295

GI number: 57238295

Start: 542516

End: 543514

Strand: Direct

Name: selU [H]

Synonym: CJE0608

Alternate gene names: 57238295

Gene position: 542516-543514 (Clockwise)

Preceding gene: 57238296

Following gene: 57238291

Centisome position: 30.52

GC content: 30.33

Gene sequence:

>999_bases
ATGCTCAGTGAAGTTGAATTTGTAGAGTTTCAAAAAGAAAATTTCTCTTTTTTAATCGATGCAAGAAGCCCTAGAGAATT
TTTGCATTCTCACTTGATAGGAGCTTTAAATTTTTATGCACTCAATGATGAAGAATATCAAGAAATAGGAACAATTTATA
AGAAAAATCAAGCTTTAGCTAAGGCTATGGGTGCGAGTTATATTTGTCAAAATACCGCTAAGCATATATTAGAAATCACT
CAAAATTTTCGCATAGGAGAAAAGGTGGGGATTTATTGTTCTCGTGGGGGTTTGCGTTCAAAGTCTATCGCAGTGATTTT
AAGTGAGCTTGGCTTTAGGGTGGTGCGTTTAAAAGGTGGGTTTAAAGCTTATAGAACTTTTGTAACGCATTATTTCGAAA
ATGAAATAAATTTTGATTTTTTTGCTCTTTGTGGTAATACAGGTTGTGGAAAAACAGAGCTTTTAGAACAACTCCCACAA
GCTATAAATTTAGAAAAAATGGCAAATCATTTAGGCTCGTCTTTTGGTGATATTTTAGGAAAACAACCTACGCAAAAAGC
TTTTGAAGCAGAACTTTTTCACAATATTCAAAATTTAGAAAATTTTGCTTTCATAGAAAGCGAAAGTCGCAAAATAGGGG
ATATTATCTTACCTTTGAAATTTTATGAAAAAATGCAAAAGGCTTTTAAAATTTATTGTTTTTGTTCTTTGGAAAATCGC
GTTAGAAGAATACAAAAAATTTATCAAGAAAAAATGACTCCTTTGAAATTTCAACAATGTGTGCAAAAAATCAGTCCTTA
TATCAGCTTAAATTTACGCCAAGATTTGCTTCAAAGTTATGAGAGAAAAGAATGGCAAAAGCTTATTGTTATGCTTTTGG
AGTATTATGATAAAACTTATAAAAAACCAGATAAGATTGATCTTGAGTTAAATACTGATGATATTTTAAAAGCTAAAGAA
GAGCTTTTAGATCATTTTAAAGCACAATTACTTTTTTAA

Upstream 100 bases:

>100_bases
TGGTCAGGAGATACAAATTTTATCACAACCATAGGAGAAACTAGGGTTTGTGGCACTAATATAGAGCAAGTTTATCAAAA
ACTTGTTTTGGCTTTTAAAA

Downstream 100 bases:

>100_bases
TATCAGATAATTTTATTAAATAATCAAATTTTTTCTTCATTATCTTGTAATAATCCTTTTTATCTTTGTTGTTTTTTAAC
TTGGCTCAAATTTTTATTTT

Product: tRNA 2-selenouridine synthase

Products: NA

Alternate protein names: Selenophosphate-dependent tRNA 2-selenouridine synthase [H]

Number of amino acids: Translated: 332; Mature: 332

Protein sequence:

>332_residues
MLSEVEFVEFQKENFSFLIDARSPREFLHSHLIGALNFYALNDEEYQEIGTIYKKNQALAKAMGASYICQNTAKHILEIT
QNFRIGEKVGIYCSRGGLRSKSIAVILSELGFRVVRLKGGFKAYRTFVTHYFENEINFDFFALCGNTGCGKTELLEQLPQ
AINLEKMANHLGSSFGDILGKQPTQKAFEAELFHNIQNLENFAFIESESRKIGDIILPLKFYEKMQKAFKIYCFCSLENR
VRRIQKIYQEKMTPLKFQQCVQKISPYISLNLRQDLLQSYERKEWQKLIVMLLEYYDKTYKKPDKIDLELNTDDILKAKE
ELLDHFKAQLLF

Sequences:

>Translated_332_residues
MLSEVEFVEFQKENFSFLIDARSPREFLHSHLIGALNFYALNDEEYQEIGTIYKKNQALAKAMGASYICQNTAKHILEIT
QNFRIGEKVGIYCSRGGLRSKSIAVILSELGFRVVRLKGGFKAYRTFVTHYFENEINFDFFALCGNTGCGKTELLEQLPQ
AINLEKMANHLGSSFGDILGKQPTQKAFEAELFHNIQNLENFAFIESESRKIGDIILPLKFYEKMQKAFKIYCFCSLENR
VRRIQKIYQEKMTPLKFQQCVQKISPYISLNLRQDLLQSYERKEWQKLIVMLLEYYDKTYKKPDKIDLELNTDDILKAKE
ELLDHFKAQLLF
>Mature_332_residues
MLSEVEFVEFQKENFSFLIDARSPREFLHSHLIGALNFYALNDEEYQEIGTIYKKNQALAKAMGASYICQNTAKHILEIT
QNFRIGEKVGIYCSRGGLRSKSIAVILSELGFRVVRLKGGFKAYRTFVTHYFENEINFDFFALCGNTGCGKTELLEQLPQ
AINLEKMANHLGSSFGDILGKQPTQKAFEAELFHNIQNLENFAFIESESRKIGDIILPLKFYEKMQKAFKIYCFCSLENR
VRRIQKIYQEKMTPLKFQQCVQKISPYISLNLRQDLLQSYERKEWQKLIVMLLEYYDKTYKKPDKIDLELNTDDILKAKE
ELLDHFKAQLLF

Specific function: Catalyzes the transfer of selenium from selenophosphate for conversion of 2-thiouridine to 2-selenouridine at the wobble position in tRNA [H]

COG id: COG2603

COG function: function code R; Predicted ATPase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 rhodanese domain [H]

Homologues:

Organism=Escherichia coli, GI1786712, Length=239, Percent_Identity=31.3807531380753, Blast_Score=103, Evalue=1e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001763
- InterPro:   IPR017582 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38770; Mature: 38770

Theoretical pI: Translated: 8.25; Mature: 8.25

Prosite motif: PS50206 RHODANESE_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSEVEFVEFQKENFSFLIDARSPREFLHSHLIGALNFYALNDEEYQEIGTIYKKNQALA
CCCCCHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHEEEECHHHHHHHHHHHHHHHHHH
KAMGASYICQNTAKHILEITQNFRIGEKVGIYCSRGGLRSKSIAVILSELGFRVVRLKGG
HHHHHHHHHHHHHHHHHHHHHCCCCCCHHEEEECCCCCCHHHHHHHHHHHCCEEEEECCC
FKAYRTFVTHYFENEINFDFFALCGNTGCGKTELLEQLPQAINLEKMANHLGSSFGDILG
HHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHCCHHHHHHHHCCHHHHHHC
KQPTQKAFEAELFHNIQNLENFAFIESESRKIGDIILPLKFYEKMQKAFKIYCFCSLENR
CCCHHHHHHHHHHHHHHHHHHHEEEECCCCCHHHEEECHHHHHHHHHHHEEEEEEEHHHH
VRRIQKIYQEKMTPLKFQQCVQKISPYISLNLRQDLLQSYERKEWQKLIVMLLEYYDKTY
HHHHHHHHHHHCCHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
KKPDKIDLELNTDDILKAKEELLDHFKAQLLF
CCCCCEEEEECCHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLSEVEFVEFQKENFSFLIDARSPREFLHSHLIGALNFYALNDEEYQEIGTIYKKNQALA
CCCCCHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHEEEECHHHHHHHHHHHHHHHHHH
KAMGASYICQNTAKHILEITQNFRIGEKVGIYCSRGGLRSKSIAVILSELGFRVVRLKGG
HHHHHHHHHHHHHHHHHHHHHCCCCCCHHEEEECCCCCCHHHHHHHHHHHCCEEEEECCC
FKAYRTFVTHYFENEINFDFFALCGNTGCGKTELLEQLPQAINLEKMANHLGSSFGDILG
HHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHCCHHHHHHHHCCHHHHHHC
KQPTQKAFEAELFHNIQNLENFAFIESESRKIGDIILPLKFYEKMQKAFKIYCFCSLENR
CCCHHHHHHHHHHHHHHHHHHHEEEECCCCCHHHEEECHHHHHHHHHHHEEEEEEEHHHH
VRRIQKIYQEKMTPLKFQQCVQKISPYISLNLRQDLLQSYERKEWQKLIVMLLEYYDKTY
HHHHHHHHHHHCCHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
KKPDKIDLELNTDDILKAKEELLDHFKAQLLF
CCCCCEEEEECCHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA