| Definition | Campylobacter jejuni RM1221, complete genome. |
|---|---|
| Accession | NC_003912 |
| Length | 1,777,831 |
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The map label for this gene is hemH [H]
Identifier: 57238294
GI number: 57238294
Start: 545084
End: 545995
Strand: Reverse
Name: hemH [H]
Synonym: CJE0610
Alternate gene names: 57238294
Gene position: 545995-545084 (Counterclockwise)
Preceding gene: 57238293
Following gene: 57237588
Centisome position: 30.71
GC content: 27.74
Gene sequence:
>912_bases GTGAAATTAGTTTTATTTTTAAATATGGGCGGAGCTACGAATTTACAAGATTGTGAAGTTTTTTTAAAAAATATGTTTAA TGATCCTTATATTTTAGGAATCAAAAATCGATTTTTAAGAAAATTTGTAGCATGGATCATAACAAAGGCTCGCGTTAAAG CCATGCAAGAAAACTATAAAAAAATGGGCGGAAAATCCCCTTTAAACGAACTTACTCAAAGCCTGTGTGACAAGCTTAAT TTAAAACAAGATGAATTTAAATTTGATTTTGTAAATCTTTATGTTCCTCCTTTTGCCACAGAAATTTTGCAAAAATACAC TTTAAATGCAAGTGATGAAATCATTCTTTTTCCACTTTATCCGCACCATTCTTGCACCACAGTAACTTCATCTTTAGAAG TTCTGCAAAATGAAATTTCAAAGCAAAAAATTCAAGCAAAAGTAAAAACTATAGATATTTTTTATAAAAATGAGCTTTAT AATGAGATGATAGTTTCGCACATTTTGGATAAAAAAAGTAAATTTGATGCCAAAATTTTGATTTTTTCAGCGCATTCTTT GCCACAAAGCATTATTGACAAAGGTGATTTATATGAAAAGCATGTAAATGATCATGTAGAAATTTTAAAAGAAAAACTAA AAGATCATTTTGATGAATTTATTTTAGCTTATCAGTCTAAACTAGGCCCTGTAAAATGGCTTGAACCAAATACAAGCGAT GTTTTGGCAAATTTAAACGATAAAGCTTTGATTTATCCTATTTCTTTTTGCATTGATTGTTCTGAAACGATTTTTGAACT AGGTATGGAGTATAAACATTTAGCAAAATGTGATTATGATTTGATAAGTTGTCCTAATAATAGTGATGAATTTATGAAAT TTATTTTAAAGTATTTATCTGATCTTAACTAA
Upstream 100 bases:
>100_bases CAGAACACGAAGCTTTGTTAAAACTTATCGATAATCAACCCAATCATTTAGCCAGCACGAGCGATGCTTACAAAGTTCAA GAAATTTTAGAAAGGTTTGC
Downstream 100 bases:
>100_bases GAATGAATTTGAGATCCTTGTCTATCATTTTTTTAAACTTTTTTGGTAAAAATTTAGCCGACTAAACCAAAGTATAAGCT TTTTCTCCGTGCAAACTCAC
Product: ferrochelatase
Products: NA
Alternate protein names: Heme synthase; Protoheme ferro-lyase [H]
Number of amino acids: Translated: 303; Mature: 303
Protein sequence:
>303_residues MKLVLFLNMGGATNLQDCEVFLKNMFNDPYILGIKNRFLRKFVAWIITKARVKAMQENYKKMGGKSPLNELTQSLCDKLN LKQDEFKFDFVNLYVPPFATEILQKYTLNASDEIILFPLYPHHSCTTVTSSLEVLQNEISKQKIQAKVKTIDIFYKNELY NEMIVSHILDKKSKFDAKILIFSAHSLPQSIIDKGDLYEKHVNDHVEILKEKLKDHFDEFILAYQSKLGPVKWLEPNTSD VLANLNDKALIYPISFCIDCSETIFELGMEYKHLAKCDYDLISCPNNSDEFMKFILKYLSDLN
Sequences:
>Translated_303_residues MKLVLFLNMGGATNLQDCEVFLKNMFNDPYILGIKNRFLRKFVAWIITKARVKAMQENYKKMGGKSPLNELTQSLCDKLN LKQDEFKFDFVNLYVPPFATEILQKYTLNASDEIILFPLYPHHSCTTVTSSLEVLQNEISKQKIQAKVKTIDIFYKNELY NEMIVSHILDKKSKFDAKILIFSAHSLPQSIIDKGDLYEKHVNDHVEILKEKLKDHFDEFILAYQSKLGPVKWLEPNTSD VLANLNDKALIYPISFCIDCSETIFELGMEYKHLAKCDYDLISCPNNSDEFMKFILKYLSDLN >Mature_303_residues MKLVLFLNMGGATNLQDCEVFLKNMFNDPYILGIKNRFLRKFVAWIITKARVKAMQENYKKMGGKSPLNELTQSLCDKLN LKQDEFKFDFVNLYVPPFATEILQKYTLNASDEIILFPLYPHHSCTTVTSSLEVLQNEISKQKIQAKVKTIDIFYKNELY NEMIVSHILDKKSKFDAKILIFSAHSLPQSIIDKGDLYEKHVNDHVEILKEKLKDHFDEFILAYQSKLGPVKWLEPNTSD VLANLNDKALIYPISFCIDCSETIFELGMEYKHLAKCDYDLISCPNNSDEFMKFILKYLSDLN
Specific function: Catalyzes the ferrous insertion into protoporphyrin IX [H]
COG id: COG0276
COG function: function code H; Protoheme ferro-lyase (ferrochelatase)
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ferrochelatase family [H]
Homologues:
Organism=Homo sapiens, GI60499021, Length=295, Percent_Identity=32.5423728813559, Blast_Score=132, Evalue=3e-31, Organism=Homo sapiens, GI60499025, Length=292, Percent_Identity=31.8493150684932, Blast_Score=132, Evalue=3e-31, Organism=Escherichia coli, GI1786681, Length=305, Percent_Identity=21.3114754098361, Blast_Score=76, Evalue=2e-15, Organism=Saccharomyces cerevisiae, GI6324750, Length=283, Percent_Identity=27.9151943462898, Blast_Score=106, Evalue=4e-24, Organism=Drosophila melanogaster, GI17864156, Length=321, Percent_Identity=26.1682242990654, Blast_Score=115, Evalue=3e-26, Organism=Drosophila melanogaster, GI24651774, Length=257, Percent_Identity=26.8482490272374, Blast_Score=103, Evalue=1e-22, Organism=Drosophila melanogaster, GI45552018, Length=193, Percent_Identity=26.4248704663212, Blast_Score=71, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001015 - InterPro: IPR019772 [H]
Pfam domain/function: PF00762 Ferrochelatase [H]
EC number: =4.99.1.1 [H]
Molecular weight: Translated: 35169; Mature: 35169
Theoretical pI: Translated: 6.71; Mature: 6.71
Prosite motif: PS00534 FERROCHELATASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLVLFLNMGGATNLQDCEVFLKNMFNDPYILGIKNRFLRKFVAWIITKARVKAMQENYK CEEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHH KMGGKSPLNELTQSLCDKLNLKQDEFKFDFVNLYVPPFATEILQKYTLNASDEIILFPLY HCCCCCCHHHHHHHHHHHCCCCCHHCEEEEEEEECCHHHHHHHHHHCCCCCCCEEEEECC PHHSCTTVTSSLEVLQNEISKQKIQAKVKTIDIFYKNELYNEMIVSHILDKKSKFDAKIL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEHHHHHHHHHHHHHHHCCCCCCEEEE IFSAHSLPQSIIDKGDLYEKHVNDHVEILKEKLKDHFDEFILAYQSKLGPVKWLEPNTSD EEECCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHH VLANLNDKALIYPISFCIDCSETIFELGMEYKHLAKCDYDLISCPNNSDEFMKFILKYLS HHHCCCCCEEEEEHHHHHCCHHHHHHHCCHHHHHHHCCCHHEECCCCHHHHHHHHHHHHH DLN CCC >Mature Secondary Structure MKLVLFLNMGGATNLQDCEVFLKNMFNDPYILGIKNRFLRKFVAWIITKARVKAMQENYK CEEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHH KMGGKSPLNELTQSLCDKLNLKQDEFKFDFVNLYVPPFATEILQKYTLNASDEIILFPLY HCCCCCCHHHHHHHHHHHCCCCCHHCEEEEEEEECCHHHHHHHHHHCCCCCCCEEEEECC PHHSCTTVTSSLEVLQNEISKQKIQAKVKTIDIFYKNELYNEMIVSHILDKKSKFDAKIL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEHHHHHHHHHHHHHHHCCCCCCEEEE IFSAHSLPQSIIDKGDLYEKHVNDHVEILKEKLKDHFDEFILAYQSKLGPVKWLEPNTSD EEECCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHH VLANLNDKALIYPISFCIDCSETIFELGMEYKHLAKCDYDLISCPNNSDEFMKFILKYLS HHHCCCCCEEEEEHHHHHCCHHHHHHHCCHHHHHHHCCCHHEECCCCHHHHHHHHHHHHH DLN CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA