| Definition | Campylobacter jejuni RM1221, complete genome. |
|---|---|
| Accession | NC_003912 |
| Length | 1,777,831 |
Click here to switch to the map view.
The map label for this gene is purC [H]
Identifier: 57238285
GI number: 57238285
Start: 557524
End: 558234
Strand: Direct
Name: purC [H]
Synonym: CJE0619
Alternate gene names: 57238285
Gene position: 557524-558234 (Clockwise)
Preceding gene: 57238286
Following gene: 57238284
Centisome position: 31.36
GC content: 29.54
Gene sequence:
>711_bases ATGACAAAAAAAGAAATGCTCTACGAAGGAAAAGGTAAAAAACTTTTCAAAACTGATGATGAAAATTTACTAATTAGTGA GTTTAAAGATGATTTAACCGCTTTTAATGCAGAAAAAAGAGGCAATGAAAGTGGAAAAGGTGCATTAAACTGTAGAATCA GTACTGAAATTTTTCATTTGCTCGAAAAAAATGGGATTAAAACCCATTTGGTAGAAACTATAAGCGATACAGAACAAGTG GTTAAAAAATGTAAAATTGTTCCTATTGAAGTTATAGTACGCAATGTTGCAACAGGTTCTCTTACAAAAAGACTGGGCAT TAAAGATGGCACTGTGCTACCTTTTGCTTTGGTGGAATTTTGTCTTAAAGATGATGCCTTAGGCGATCCTTTTATCAATG ATGAGCATTGTTTGATTTTAAATTTAGTGCAAAATGAAGCTCAAATTAGTGAAATTAAAAATATGGCTAGAAAGATTAAC TCTATTTTAACTCCATTTTTTGACAATAAAAATTTAAGGCTGATTGACTTTAAAATCGAACTGGGTTTAACTAAAGATAA TGAACTTGTTTTAGCCGATGAAATAAGCCCTGATAGTTGTAGATTTTGGGATAAATTTAGTAATGAAAAATTAGACAAAG ATAGATTTCGTCAAGATCTAGGTAATGTAAAAATGGCTTATGAAGAAGTTTTAAAAAGAATATTAAATTAA
Upstream 100 bases:
>100_bases AATAAAAATCTAATCAGTCAAAAACAAATCAATGATGATGCACAGTTAAATTCAGCTATTGATACTATTAAAATTTTAAA TATCAAACAAGGACGATAAA
Downstream 100 bases:
>100_bases GGAAAAATATGGAAGTTATTGTAAATATTTCTTTAAAAAATGGGGTTTTAGATCCACAAGGCAAAGCGGTGGAAAAAGCT TTGCATTCTTTAAATTTTAA
Product: phosphoribosylaminoimidazole-succinocarboxamide synthase
Products: NA
Alternate protein names: SAICAR synthetase [H]
Number of amino acids: Translated: 236; Mature: 235
Protein sequence:
>236_residues MTKKEMLYEGKGKKLFKTDDENLLISEFKDDLTAFNAEKRGNESGKGALNCRISTEIFHLLEKNGIKTHLVETISDTEQV VKKCKIVPIEVIVRNVATGSLTKRLGIKDGTVLPFALVEFCLKDDALGDPFINDEHCLILNLVQNEAQISEIKNMARKIN SILTPFFDNKNLRLIDFKIELGLTKDNELVLADEISPDSCRFWDKFSNEKLDKDRFRQDLGNVKMAYEEVLKRILN
Sequences:
>Translated_236_residues MTKKEMLYEGKGKKLFKTDDENLLISEFKDDLTAFNAEKRGNESGKGALNCRISTEIFHLLEKNGIKTHLVETISDTEQV VKKCKIVPIEVIVRNVATGSLTKRLGIKDGTVLPFALVEFCLKDDALGDPFINDEHCLILNLVQNEAQISEIKNMARKIN SILTPFFDNKNLRLIDFKIELGLTKDNELVLADEISPDSCRFWDKFSNEKLDKDRFRQDLGNVKMAYEEVLKRILN >Mature_235_residues TKKEMLYEGKGKKLFKTDDENLLISEFKDDLTAFNAEKRGNESGKGALNCRISTEIFHLLEKNGIKTHLVETISDTEQVV KKCKIVPIEVIVRNVATGSLTKRLGIKDGTVLPFALVEFCLKDDALGDPFINDEHCLILNLVQNEAQISEIKNMARKINS ILTPFFDNKNLRLIDFKIELGLTKDNELVLADEISPDSCRFWDKFSNEKLDKDRFRQDLGNVKMAYEEVLKRILN
Specific function: De novo purine biosynthesis; seventh step. [C]
COG id: COG0152
COG function: function code F; Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the SAICAR synthetase family [H]
Homologues:
Organism=Homo sapiens, GI119220557, Length=244, Percent_Identity=32.3770491803279, Blast_Score=117, Evalue=9e-27, Organism=Homo sapiens, GI5453539, Length=244, Percent_Identity=32.3770491803279, Blast_Score=117, Evalue=9e-27, Organism=Homo sapiens, GI119220559, Length=251, Percent_Identity=31.4741035856574, Blast_Score=109, Evalue=2e-24, Organism=Escherichia coli, GI1788820, Length=234, Percent_Identity=42.7350427350427, Blast_Score=187, Evalue=7e-49, Organism=Caenorhabditis elegans, GI17531275, Length=239, Percent_Identity=36.4016736401674, Blast_Score=123, Evalue=6e-29, Organism=Drosophila melanogaster, GI18860083, Length=238, Percent_Identity=28.9915966386555, Blast_Score=100, Evalue=1e-21, Organism=Drosophila melanogaster, GI24583917, Length=247, Percent_Identity=31.5789473684211, Blast_Score=99, Evalue=2e-21,
Paralogues:
None
Copy number: 1680 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 13,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013816 - InterPro: IPR001636 - InterPro: IPR018236 [H]
Pfam domain/function: PF01259 SAICAR_synt [H]
EC number: =6.3.2.6 [H]
Molecular weight: Translated: 26954; Mature: 26823
Theoretical pI: Translated: 5.86; Mature: 5.86
Prosite motif: PS01057 SAICAR_SYNTHETASE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKKEMLYEGKGKKLFKTDDENLLISEFKDDLTAFNAEKRGNESGKGALNCRISTEIFHL CCCHHHEECCCCCEEEECCCCCEEHHHHHHHHHHHCCHHCCCCCCCCEEEEEEHHHHHHH LEKNGIKTHLVETISDTEQVVKKCKIVPIEVIVRNVATGSLTKRLGIKDGTVLPFALVEF HHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHCCCCCCCCHHHHHHHH CLKDDALGDPFINDEHCLILNLVQNEAQISEIKNMARKINSILTPFFDNKNLRLIDFKIE HHHCCCCCCCCCCCCCEEEEEEHHCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEE LGLTKDNELVLADEISPDSCRFWDKFSNEKLDKDRFRQDLGNVKMAYEEVLKRILN EECCCCCCEEEEECCCCCCHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHHHHCC >Mature Secondary Structure TKKEMLYEGKGKKLFKTDDENLLISEFKDDLTAFNAEKRGNESGKGALNCRISTEIFHL CCHHHEECCCCCEEEECCCCCEEHHHHHHHHHHHCCHHCCCCCCCCEEEEEEHHHHHHH LEKNGIKTHLVETISDTEQVVKKCKIVPIEVIVRNVATGSLTKRLGIKDGTVLPFALVEF HHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHCCCCCCCCHHHHHHHH CLKDDALGDPFINDEHCLILNLVQNEAQISEIKNMARKINSILTPFFDNKNLRLIDFKIE HHHCCCCCCCCCCCCCEEEEEEHHCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEE LGLTKDNELVLADEISPDSCRFWDKFSNEKLDKDRFRQDLGNVKMAYEEVLKRILN EECCCCCCEEEEECCCCCCHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA